RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 LOXHD1Q8IVV2 1947 aa20.57■□□□□ 0.88
PRPF40A-209ENST00000486100 NCK2O43639 380 aa20.56■□□□□ 0.88
PRPF40A-209ENST00000486100 ST18O60284 1047 aa20.56■□□□□ 0.88
PRPF40A-209ENST00000486100 EOMESO95936 686 aa20.56■□□□□ 0.88
PRPF40A-209ENST00000486100 LEXMQ3ZCV2 418 aa20.56■□□□□ 0.88
PRPF40A-209ENST00000486100 TCP11Q8WWU5 503 aa20.56■□□□□ 0.88
PRPF40A-209ENST00000486100 PSPC1Q8WXF1 523 aaKnown RBP20.56■□□□□ 0.88
PRPF40A-209ENST00000486100 NLRP4Q96MN2 994 aa20.56■□□□□ 0.88
PRPF40A-209ENST00000486100 CASD1Q96PB1 797 aa20.56■□□□□ 0.88
PRPF40A-209ENST00000486100 UPF2Q9HAU5 1272 aaKnown RBP20.56■□□□□ 0.88
PRPF40A-209ENST00000486100 IFT122Q9HBG6 1241 aa20.56■□□□□ 0.88
PRPF40A-209ENST00000486100 ANKEF1Q9NU02 776 aa20.56■□□□□ 0.88
PRPF40A-209ENST00000486100 RNF19AQ9NV58 838 aa20.56■□□□□ 0.88
PRPF40A-209ENST00000486100 WDR81Q562E7 1941 aa20.56■□□□□ 0.88
PRPF40A-209ENST00000486100 ASAP2O43150 1006 aa20.55■□□□□ 0.88
PRPF40A-209ENST00000486100 KCNA5P22460 613 aa20.55■□□□□ 0.88
PRPF40A-209ENST00000486100 ORC2Q13416 577 aaPredicted RBP20.55■□□□□ 0.88
PRPF40A-209ENST00000486100 COL19A1Q14993 1142 aa20.55■□□□□ 0.88
PRPF40A-209ENST00000486100 ZNF598Q86UK7 904 aaKnown RBP20.55■□□□□ 0.88
PRPF40A-209ENST00000486100 PABPC5Q96DU9 382 aaKnown RBP20.55■□□□□ 0.88
PRPF40A-209ENST00000486100 TRAIPQ9BWF2 469 aa20.55■□□□□ 0.88
PRPF40A-209ENST00000486100 CWH43Q9H720 699 aa20.55■□□□□ 0.88
PRPF40A-209ENST00000486100 SRGAP2CP0DJJ0 459 aa20.54■□□□□ 0.88
PRPF40A-209ENST00000486100 XRCC6P12956 609 aaKnown RBP eCLIP20.54■□□□□ 0.886e-6■■■■■ 31.4
PRPF40A-209ENST00000486100 DNAJB1P25685 340 aa20.54■□□□□ 0.88
PRPF40A-209ENST00000486100 LAMTOR4Q0VGL1 99 aa20.54■□□□□ 0.88
PRPF40A-209ENST00000486100 GNL2Q13823 731 aaKnown RBP20.54■□□□□ 0.88
PRPF40A-209ENST00000486100 EMC2Q15006 297 aa20.54■□□□□ 0.88
PRPF40A-209ENST00000486100 ZNF174Q15697 407 aa20.54■□□□□ 0.88
PRPF40A-209ENST00000486100 CSPP1Q1MSJ5 1256 aa20.54■□□□□ 0.88
PRPF40A-209ENST00000486100 CATSPER4Q7RTX7 472 aa20.54■□□□□ 0.88
PRPF40A-209ENST00000486100 SRGAP1Q7Z6B7 1085 aa20.54■□□□□ 0.88
PRPF40A-209ENST00000486100 NOSTRINQ8IVI9 506 aa20.54■□□□□ 0.88
PRPF40A-209ENST00000486100 ABI1Q8IZP0 508 aa20.54■□□□□ 0.88
PRPF40A-209ENST00000486100 RNF169Q8NCN4 708 aa20.54■□□□□ 0.88
PRPF40A-209ENST00000486100 POF1BQ8WVV4 589 aa20.54■□□□□ 0.88
PRPF40A-209ENST00000486100 MTRQ99707 1265 aa20.54■□□□□ 0.88
PRPF40A-209ENST00000486100 BMP2KQ9NSY1 1161 aaPredicted RBP20.54■□□□□ 0.88
PRPF40A-209ENST00000486100 RALGAPA2Q2PPJ7 1873 aa20.54■□□□□ 0.88
PRPF40A-209ENST00000486100 POTEMA6NI47 508 aa20.53■□□□□ 0.88
PRPF40A-209ENST00000486100 SKIP12755 728 aa20.53■□□□□ 0.88
PRPF40A-209ENST00000486100 LAG3P18627 525 aa20.53■□□□□ 0.88
PRPF40A-209ENST00000486100 TRAPPC10P48553 1259 aa20.53■□□□□ 0.88
PRPF40A-209ENST00000486100 UBE3AQ05086 875 aa20.53■□□□□ 0.88
PRPF40A-209ENST00000486100 LRRC55Q6ZSA7 311 aa20.53■□□□□ 0.88
PRPF40A-209ENST00000486100 FERMT3Q86UX7 667 aa20.53■□□□□ 0.88
PRPF40A-209ENST00000486100 COLGALT1Q8NBJ5 622 aa20.53■□□□□ 0.88
PRPF40A-209ENST00000486100 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.53■□□□□ 0.88
PRPF40A-209ENST00000486100 NECAB3Q96P71 396 aaPredicted RBP20.53■□□□□ 0.88
PRPF40A-209ENST00000486100 XPNPEP1Q9NQW7 623 aa20.53■□□□□ 0.88
PRPF40A-209ENST00000486100 HCSTQ9UBK5 93 aa20.53■□□□□ 0.88
PRPF40A-209ENST00000486100 PIN4Q9Y237 131 aaKnown RBP20.53■□□□□ 0.88
PRPF40A-209ENST00000486100 TTC28Q96AY4 2481 aa20.52■□□□□ 0.88
PRPF40A-209ENST00000486100 DGAT1O75907 488 aa20.52■□□□□ 0.88
PRPF40A-209ENST00000486100 SPATA31C1P0DKV0 1188 aa20.52■□□□□ 0.88
PRPF40A-209ENST00000486100 ATF7P17544 494 aaPredicted RBP20.52■□□□□ 0.88
PRPF40A-209ENST00000486100 U2AF2P26368 475 aaKnown RBP eCLIP20.52■□□□□ 0.88
PRPF40A-209ENST00000486100 TECP42680 631 aa20.52■□□□□ 0.88
PRPF40A-209ENST00000486100 PHKA2P46019 1235 aa20.52■□□□□ 0.88
PRPF40A-209ENST00000486100 HYAL1Q12794 435 aa20.52■□□□□ 0.88
PRPF40A-209ENST00000486100 CTC1Q2NKJ3 1217 aa20.52■□□□□ 0.88
PRPF40A-209ENST00000486100 CLLU1OSQ5K130 101 aa20.52■□□□□ 0.88
PRPF40A-209ENST00000486100 TTC38Q5R3I4 469 aa20.52■□□□□ 0.88
PRPF40A-209ENST00000486100 TWF2Q6IBS0 349 aaKnown RBP20.52■□□□□ 0.88
PRPF40A-209ENST00000486100 PPP2R3CQ969Q6 453 aa20.52■□□□□ 0.88
PRPF40A-209ENST00000486100 CLDND1Q9NY35 253 aa20.52■□□□□ 0.88
PRPF40A-209ENST00000486100 NOL7Q9UMY1 257 aaKnown RBP20.52■□□□□ 0.88
PRPF40A-209ENST00000486100 NLRC5Q86WI3 1866 aa20.52■□□□□ 0.87
PRPF40A-209ENST00000486100 ZNF623O75123 536 aa20.51■□□□□ 0.87
PRPF40A-209ENST00000486100 FGF18O76093 207 aa20.51■□□□□ 0.87
PRPF40A-209ENST00000486100 CSPG5O95196 566 aa20.51■□□□□ 0.87
PRPF40A-209ENST00000486100 OR52Z1P0C646 297 aa20.51■□□□□ 0.87
PRPF40A-209ENST00000486100 IRS1P35568 1242 aa20.51■□□□□ 0.87
PRPF40A-209ENST00000486100 RARRES1P49788 294 aa20.51■□□□□ 0.87
PRPF40A-209ENST00000486100 MXD4Q14582 209 aaPredicted RBP20.51■□□□□ 0.87
PRPF40A-209ENST00000486100 PUS10Q3MIT2 529 aaKnown RBP20.51■□□□□ 0.87
PRPF40A-209ENST00000486100 EP400NLQ6ZTU2 488 aa20.51■□□□□ 0.87
PRPF40A-209ENST00000486100 CATSPER3Q86XQ3 398 aa20.51■□□□□ 0.87
PRPF40A-209ENST00000486100 THNSL1Q8IYQ7 743 aa20.51■□□□□ 0.87
PRPF40A-209ENST00000486100 LRRC43Q8N309 656 aa20.51■□□□□ 0.87
PRPF40A-209ENST00000486100 RNF149Q8NC42 400 aa20.51■□□□□ 0.87
PRPF40A-209ENST00000486100 PIGOQ8TEQ8 1089 aa20.51■□□□□ 0.87
PRPF40A-209ENST00000486100 MINDY3Q9H8M7 445 aa20.51■□□□□ 0.87
PRPF40A-209ENST00000486100 TUFT1Q9NNX1 390 aa20.51■□□□□ 0.87
PRPF40A-209ENST00000486100 AGPAT5Q9NUQ2 364 aa20.51■□□□□ 0.87
PRPF40A-209ENST00000486100 FAM105AQ9NUU6 356 aa20.51■□□□□ 0.87
PRPF40A-209ENST00000486100 KIF3AQ9Y496 699 aa20.51■□□□□ 0.87
PRPF40A-209ENST00000486100 A0A087WWV3 80 aa20.5■□□□□ 0.87
PRPF40A-209ENST00000486100 H3BQ06 376 aaPredicted RBP20.5■□□□□ 0.87
PRPF40A-209ENST00000486100 LTBRP36941 435 aa20.5■□□□□ 0.87
PRPF40A-209ENST00000486100 RAB27AP51159 221 aa20.5■□□□□ 0.87
PRPF40A-209ENST00000486100 PLCB3Q01970 1234 aa20.5■□□□□ 0.87
PRPF40A-209ENST00000486100 POU5F1BQ06416 359 aa20.5■□□□□ 0.87
PRPF40A-209ENST00000486100 C4orf32Q8N8J7 132 aa20.5■□□□□ 0.87
PRPF40A-209ENST00000486100 HELQQ8TDG4 1101 aa20.5■□□□□ 0.87
PRPF40A-209ENST00000486100 RSPH1Q8WYR4 309 aa20.5■□□□□ 0.87
PRPF40A-209ENST00000486100 TMX3Q96JJ7 454 aa20.5■□□□□ 0.87
PRPF40A-209ENST00000486100 CCDC43Q96MW1 224 aaKnown RBP20.5■□□□□ 0.87
PRPF40A-209ENST00000486100 POLR3CQ9BUI4 534 aaPredicted RBP20.5■□□□□ 0.87
PRPF40A-209ENST00000486100 IGFLR1Q9H665 355 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms