RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 RNF20Q5VTR2 975 aa11.18□□□□□ -0.62
SND1-213ENST00000486037 DCLRE1AQ6PJP8 1040 aa11.18□□□□□ -0.62
SND1-213ENST00000486037 NME8Q8N427 588 aa11.18□□□□□ -0.62
SND1-213ENST00000486037 RNF169Q8NCN4 708 aa11.18□□□□□ -0.62
SND1-213ENST00000486037 HELQQ8TDG4 1101 aa11.18□□□□□ -0.62
SND1-213ENST00000486037 SNX21Q969T3 373 aa11.18□□□□□ -0.62
SND1-213ENST00000486037 RPP25Q9BUL9 199 aaKnown RBP11.18□□□□□ -0.62
SND1-213ENST00000486037 SPATA6Q9NWH7 488 aaPredicted RBP11.18□□□□□ -0.62
SND1-213ENST00000486037 ZSWIM5Q9P217 1185 aa11.18□□□□□ -0.62
SND1-213ENST00000486037 EPS15L1Q9UBC2 864 aa11.18□□□□□ -0.62
SND1-213ENST00000486037 IRAK3Q9Y616 596 aa11.18□□□□□ -0.62
SND1-213ENST00000486037 EVPLQ92817 2033 aa11.18□□□□□ -0.62
SND1-213ENST00000486037 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.17□□□□□ -0.62
SND1-213ENST00000486037 PALM3A6NDB9 673 aaPredicted RBP11.17□□□□□ -0.62
SND1-213ENST00000486037 GDF9O60383 454 aa11.17□□□□□ -0.62
SND1-213ENST00000486037 PCP11498 1178 aaKnown RBP11.17□□□□□ -0.62
SND1-213ENST00000486037 KLRC1P26715 233 aa11.17□□□□□ -0.62
SND1-213ENST00000486037 STARD6P59095 220 aa11.17□□□□□ -0.62
SND1-213ENST00000486037 TSGA10IPQ3SY00 556 aa11.17□□□□□ -0.62
SND1-213ENST00000486037 NLRX1Q86UT6 975 aa11.17□□□□□ -0.62
SND1-213ENST00000486037 IQCA1Q86XH1 822 aa11.17□□□□□ -0.62
SND1-213ENST00000486037 ECHDC2Q86YB7 292 aa11.17□□□□□ -0.62
SND1-213ENST00000486037 PIBF1Q8WXW3 757 aa11.17□□□□□ -0.62
SND1-213ENST00000486037 NELL1Q92832 810 aa11.17□□□□□ -0.62
SND1-213ENST00000486037 GPRASP2Q96D09 838 aa11.17□□□□□ -0.62
SND1-213ENST00000486037 JAKMIP1Q96N16 626 aaKnown RBP11.17□□□□□ -0.62
SND1-213ENST00000486037 TM6SF1Q9BZW5 370 aa11.17□□□□□ -0.62
SND1-213ENST00000486037 RIOX1Q9H6W3 641 aa11.17□□□□□ -0.62
SND1-213ENST00000486037 FBXO4Q9UKT5 387 aa11.17□□□□□ -0.62
SND1-213ENST00000486037 ANGPTL2Q9UKU9 493 aa11.17□□□□□ -0.62
SND1-213ENST00000486037 PCDHGA2Q9Y5H1 932 aa11.17□□□□□ -0.62
SND1-213ENST00000486037 ZBTB42B2RXF5 422 aa11.16□□□□□ -0.62
SND1-213ENST00000486037 MEIS2O14770 477 aa11.16□□□□□ -0.62
SND1-213ENST00000486037 GPR182O15218 404 aa11.16□□□□□ -0.62
SND1-213ENST00000486037 LAMTOR5O43504 91 aa11.16□□□□□ -0.62
SND1-213ENST00000486037 B4GALT3O60512 393 aa11.16□□□□□ -0.62
SND1-213ENST00000486037 GPR32O75388 356 aa11.16□□□□□ -0.62
SND1-213ENST00000486037 VTNP04004 478 aa11.16□□□□□ -0.62
SND1-213ENST00000486037 CPA1P15085 419 aa11.16□□□□□ -0.62
SND1-213ENST00000486037 NEK4P51957 841 aa11.16□□□□□ -0.62
SND1-213ENST00000486037 DMWDQ09019 674 aa11.16□□□□□ -0.62
SND1-213ENST00000486037 N4BP2L1Q5TBK1 243 aaPredicted RBP11.16□□□□□ -0.62
SND1-213ENST00000486037 ZNF598Q86UK7 904 aaKnown RBP11.16□□□□□ -0.62
SND1-213ENST00000486037 ABI1Q8IZP0 508 aa11.16□□□□□ -0.62
SND1-213ENST00000486037 GIMAP8Q8ND71 665 aaPredicted RBP11.16□□□□□ -0.62
SND1-213ENST00000486037 ATRIPQ8WXE1 791 aa11.16□□□□□ -0.62
SND1-213ENST00000486037 TMEM169Q96HH4 297 aa11.16□□□□□ -0.62
SND1-213ENST00000486037 KLHL5Q96PQ7 755 aa11.16□□□□□ -0.62
SND1-213ENST00000486037 RNF41Q9H4P4 317 aaPredicted RBP11.16□□□□□ -0.62
SND1-213ENST00000486037 ZSWIM6Q9HCJ5 1215 aa11.16□□□□□ -0.62
SND1-213ENST00000486037 WDR6Q9NNW5 1121 aaKnown RBP11.16□□□□□ -0.62
SND1-213ENST00000486037 ZSCAN32Q9NX65 697 aa11.16□□□□□ -0.62
SND1-213ENST00000486037 LAMA5O15230 3695 aa11.16□□□□□ -0.62
SND1-213ENST00000486037 NBEAQ8NFP9 2946 aa11.15□□□□□ -0.62
SND1-213ENST00000486037 CLUHO75153 1309 aa11.15□□□□□ -0.62
SND1-213ENST00000486037 ZC3H11AO75152 810 aaKnown RBP eCLIP11.15□□□□□ -0.62
SND1-213ENST00000486037 RFPL2O75678 378 aa11.15□□□□□ -0.62
SND1-213ENST00000486037 SSBP05455 408 aaKnown RBP eCLIP11.15□□□□□ -0.62
SND1-213ENST00000486037 CNPP09543 421 aaKnown RBP11.15□□□□□ -0.62
SND1-213ENST00000486037 CD72P21854 359 aa11.15□□□□□ -0.62
SND1-213ENST00000486037 GPC5P78333 572 aa11.15□□□□□ -0.62
SND1-213ENST00000486037 SNW1Q13573 536 aaKnown RBP11.15□□□□□ -0.62
SND1-213ENST00000486037 HTR4Q13639 388 aa11.15□□□□□ -0.62
SND1-213ENST00000486037 BECN1Q14457 450 aa11.15□□□□□ -0.62
SND1-213ENST00000486037 SEC23AQ15436 765 aa11.15□□□□□ -0.62
SND1-213ENST00000486037 IMMTQ16891 758 aaKnown RBP11.15□□□□□ -0.62
SND1-213ENST00000486037 C15orf39Q6ZRI6 1047 aa11.15□□□□□ -0.62
SND1-213ENST00000486037 DDX53Q86TM3 631 aaKnown RBP11.15□□□□□ -0.62
SND1-213ENST00000486037 TMEM87AQ8NBN3 555 aa11.15□□□□□ -0.62
SND1-213ENST00000486037 NETO1Q8TDF5 533 aa11.15□□□□□ -0.62
SND1-213ENST00000486037 BBXQ8WY36 941 aaPredicted RBP11.15□□□□□ -0.62
SND1-213ENST00000486037 IGSF21Q96ID5 467 aa11.15□□□□□ -0.62
SND1-213ENST00000486037 ZNF668Q96K58 619 aaPredicted RBP11.15□□□□□ -0.62
SND1-213ENST00000486037 SENP2Q9HC62 589 aa11.15□□□□□ -0.62
SND1-213ENST00000486037 SLC2A4RGQ9NR83 387 aa11.15□□□□□ -0.62
SND1-213ENST00000486037 UBIAD1Q9Y5Z9 338 aa11.15□□□□□ -0.62
SND1-213ENST00000486037 NUMBLQ9Y6R0 609 aa11.15□□□□□ -0.62
SND1-213ENST00000486037 DOCK6Q96HP0 2047 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 IGF2RP11717 2491 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 LAMA1P25391 3075 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 MYH15Q9Y2K3 1946 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 PNMA6FA0A0J9YX94 578 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 CCDC195A0A1B0GUA6 201 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 KANSL1LA0AUZ9 987 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 E7EWF7 191 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 ANHXE9PGG2 379 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 HOXA2O43364 376 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 LILRB3O75022 631 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 NCLP19338 710 aaKnown RBP11.14□□□□□ -0.63
SND1-213ENST00000486037 FGFR4P22455 802 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 KLRC2P26717 231 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 ALDH7A1P49419 539 aaKnown RBP11.14□□□□□ -0.63
SND1-213ENST00000486037 STAT5BP51692 787 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 CRYBB1P53674 252 aaPredicted RBP11.14□□□□□ -0.63
SND1-213ENST00000486037 ACTR2P61160 394 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 MTMR1Q13613 665 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 KRT32Q14532 448 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 CCDC178Q5BJE1 867 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 RUFY3Q7L099 469 aa11.14□□□□□ -0.63
SND1-213ENST00000486037 HSCBQ8IWL3 235 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 186.5 ms