RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 ZSCAN22P10073 491 aaPredicted RBP13.83□□□□□ -0.2
HMG20B-211ENST00000486028 ZSCAN20P17040 1043 aaPredicted RBP13.83□□□□□ -0.2
HMG20B-211ENST00000486028 CYP11B2P19099 503 aa13.83□□□□□ -0.2
HMG20B-211ENST00000486028 SFPQP23246 707 aaKnown RBP eCLIP13.83□□□□□ -0.2
HMG20B-211ENST00000486028 ARL2P36404 184 aa13.83□□□□□ -0.2
HMG20B-211ENST00000486028 LONP1P36776 959 aaKnown RBP13.83□□□□□ -0.2
HMG20B-211ENST00000486028 UBA7P41226 1012 aa13.83□□□□□ -0.2
HMG20B-211ENST00000486028 HTRA4P83105 476 aaPredicted RBP13.83□□□□□ -0.2
HMG20B-211ENST00000486028 CEBPZQ03701 1054 aaKnown RBP13.83□□□□□ -0.2
HMG20B-211ENST00000486028 SLC24A5Q71RS6 500 aa13.83□□□□□ -0.2
HMG20B-211ENST00000486028 SRGAP1Q7Z6B7 1085 aa13.83□□□□□ -0.2
HMG20B-211ENST00000486028 NPAS4Q8IUM7 802 aa13.83□□□□□ -0.2
HMG20B-211ENST00000486028 RNF149Q8NC42 400 aa13.83□□□□□ -0.2
HMG20B-211ENST00000486028 LINC01599Q8WXQ3 324 aa13.83□□□□□ -0.2
HMG20B-211ENST00000486028 CDK5RAP3Q96JB5 506 aa13.83□□□□□ -0.2
HMG20B-211ENST00000486028 ZNF396Q96N95 335 aaPredicted RBP13.83□□□□□ -0.2
HMG20B-211ENST00000486028 NT5C3AQ9H0P0 336 aa13.83□□□□□ -0.2
HMG20B-211ENST00000486028 BHMT2Q9H2M3 363 aa13.83□□□□□ -0.2
HMG20B-211ENST00000486028 RGS18Q9NS28 235 aa13.83□□□□□ -0.2
HMG20B-211ENST00000486028 MICAL3Q7RTP6 2002 aa13.83□□□□□ -0.2
HMG20B-211ENST00000486028 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.82□□□□□ -0.2
HMG20B-211ENST00000486028 MGEA5O60502 916 aa13.82□□□□□ -0.2
HMG20B-211ENST00000486028 CSDE1O75534 798 aaKnown RBP13.82□□□□□ -0.2
HMG20B-211ENST00000486028 SLC34A2O95436 690 aa13.82□□□□□ -0.2
HMG20B-211ENST00000486028 EYA4O95677 639 aa13.82□□□□□ -0.2
HMG20B-211ENST00000486028 FGFR4P22455 802 aa13.82□□□□□ -0.2
HMG20B-211ENST00000486028 ANP32AP39687 249 aaKnown RBP13.82□□□□□ -0.2
HMG20B-211ENST00000486028 PHKA2P46019 1235 aa13.82□□□□□ -0.2
HMG20B-211ENST00000486028 SARSP49591 514 aaKnown RBP13.82□□□□□ -0.2
HMG20B-211ENST00000486028 TAP1Q03518 808 aa13.82□□□□□ -0.2
HMG20B-211ENST00000486028 POU5F1BQ06416 359 aa13.82□□□□□ -0.2
HMG20B-211ENST00000486028 DSC3Q14574 896 aa13.82□□□□□ -0.2
HMG20B-211ENST00000486028 GRIN2CQ14957 1233 aa13.82□□□□□ -0.2
HMG20B-211ENST00000486028 PTPAQ15257 358 aa13.82□□□□□ -0.2
HMG20B-211ENST00000486028 HYIQ5T013 277 aa13.82□□□□□ -0.2
HMG20B-211ENST00000486028 FAM102BQ5T8I3 360 aa13.82□□□□□ -0.2
HMG20B-211ENST00000486028 FOXD4L5Q5VV16 416 aaPredicted RBP13.82□□□□□ -0.2
HMG20B-211ENST00000486028 MAEAQ7L5Y9 396 aa13.82□□□□□ -0.2
HMG20B-211ENST00000486028 CABP7Q86V35 215 aa13.82□□□□□ -0.2
HMG20B-211ENST00000486028 FOXD4L4Q8WXT5 416 aaPredicted RBP13.82□□□□□ -0.2
HMG20B-211ENST00000486028 IPO9Q96P70 1041 aaKnown RBP13.82□□□□□ -0.2
HMG20B-211ENST00000486028 CDX2Q99626 313 aaPredicted RBP13.82□□□□□ -0.2
HMG20B-211ENST00000486028 POLR3FQ9H1D9 316 aaPredicted RBP13.82□□□□□ -0.2
HMG20B-211ENST00000486028 IFT122Q9HBG6 1241 aa13.82□□□□□ -0.2
HMG20B-211ENST00000486028 CHST12Q9NRB3 414 aa13.82□□□□□ -0.2
HMG20B-211ENST00000486028 WDR70Q9NW82 654 aa13.82□□□□□ -0.2
HMG20B-211ENST00000486028 LRFN2Q9ULH4 789 aa13.82□□□□□ -0.2
HMG20B-211ENST00000486028 PCDHB7Q9Y5E2 793 aa13.82□□□□□ -0.2
HMG20B-211ENST00000486028 CHD9Q3L8U1 2897 aa13.81□□□□□ -0.2
HMG20B-211ENST00000486028 SIP14410 1827 aa13.81□□□□□ -0.2
HMG20B-211ENST00000486028 MYO9BQ13459 2157 aa13.81□□□□□ -0.2
HMG20B-211ENST00000486028 LCHNA4D1U4 455 aa13.81□□□□□ -0.2
HMG20B-211ENST00000486028 C9IYK1 514 aa13.81□□□□□ -0.2
HMG20B-211ENST00000486028 MARCKSP29966 332 aaPredicted RBP13.81□□□□□ -0.2
HMG20B-211ENST00000486028 FAM189BP81408 668 aa13.81□□□□□ -0.2
HMG20B-211ENST00000486028 SLC39A14Q15043 492 aa13.81□□□□□ -0.2
HMG20B-211ENST00000486028 CATSPER4Q7RTX7 472 aa13.81□□□□□ -0.2
HMG20B-211ENST00000486028 ASAP3Q8TDY4 903 aa13.81□□□□□ -0.2
HMG20B-211ENST00000486028 CALML4Q96GE6 196 aa13.81□□□□□ -0.2
HMG20B-211ENST00000486028 GUCD1Q96NT3 240 aa13.81□□□□□ -0.2
HMG20B-211ENST00000486028 USP28Q96RU2 1077 aa13.81□□□□□ -0.2
HMG20B-211ENST00000486028 DACT1Q9NYF0 836 aa13.81□□□□□ -0.2
HMG20B-211ENST00000486028 SRPRBQ9Y5M8 271 aaKnown RBP13.81□□□□□ -0.2
HMG20B-211ENST00000486028 MORC2Q9Y6X9 1032 aaPredicted RBP13.81□□□□□ -0.2
HMG20B-211ENST00000486028 LOXHD1Q8IVV2 1947 aa13.8□□□□□ -0.2
HMG20B-211ENST00000486028 TTC3P53804 2025 aa13.8□□□□□ -0.2
HMG20B-211ENST00000486028 LINC01553A4QN01 128 aa13.8□□□□□ -0.2
HMG20B-211ENST00000486028 E9PMD0 336 aa13.8□□□□□ -0.2
HMG20B-211ENST00000486028 DGKIO75912 1065 aa13.8□□□□□ -0.2
HMG20B-211ENST00000486028 F13A1P00488 732 aa13.8□□□□□ -0.2
HMG20B-211ENST00000486028 IBSPP21815 317 aaPredicted RBP13.8□□□□□ -0.2
HMG20B-211ENST00000486028 GLRA2P23416 452 aa13.8□□□□□ -0.2
HMG20B-211ENST00000486028 PTENP60484 403 aa13.8□□□□□ -0.2
HMG20B-211ENST00000486028 NCBP1Q09161 790 aaKnown RBP13.8□□□□□ -0.2
HMG20B-211ENST00000486028 GRB10Q13322 594 aa13.8□□□□□ -0.2
HMG20B-211ENST00000486028 PCBP1Q15365 356 aaKnown RBP eCLIP13.8□□□□□ -0.2
HMG20B-211ENST00000486028 CRIPAKQ8N1N5 446 aa13.8□□□□□ -0.2
HMG20B-211ENST00000486028 RASSF8Q8NHQ8 419 aa13.8□□□□□ -0.2
HMG20B-211ENST00000486028 SP7Q8TDD2 431 aaPredicted RBP13.8□□□□□ -0.2
HMG20B-211ENST00000486028 KIFAP3Q92845 792 aa13.8□□□□□ -0.2
HMG20B-211ENST00000486028 PNMA5Q96PV4 448 aa13.8□□□□□ -0.2
HMG20B-211ENST00000486028 TGS1Q96RS0 853 aaKnown RBP13.8□□□□□ -0.2
HMG20B-211ENST00000486028 PLIN2Q99541 437 aa13.8□□□□□ -0.2
HMG20B-211ENST00000486028 GPRC5CQ9NQ84 441 aa13.8□□□□□ -0.2
HMG20B-211ENST00000486028 TFIP11Q9UBB9 837 aaKnown RBP13.8□□□□□ -0.2
HMG20B-211ENST00000486028 FBXO2Q9UK22 296 aaPredicted RBP13.8□□□□□ -0.2
HMG20B-211ENST00000486028 INO80B-WBP1J3KQ70 363 aa13.79□□□□□ -0.2
HMG20B-211ENST00000486028 ARHGEF15O94989 841 aa13.79□□□□□ -0.2
HMG20B-211ENST00000486028 SSBP05455 408 aaKnown RBP eCLIP13.79□□□□□ -0.2
HMG20B-211ENST00000486028 CHRM1P11229 460 aaPredicted RBP13.79□□□□□ -0.2
HMG20B-211ENST00000486028 SKIP12755 728 aa13.79□□□□□ -0.2
HMG20B-211ENST00000486028 DEKP35659 375 aaKnown RBP13.79□□□□□ -0.2
HMG20B-211ENST00000486028 NASPP49321 788 aaPredicted RBP13.79□□□□□ -0.2
HMG20B-211ENST00000486028 ERVK-21P61565 698 aa13.79□□□□□ -0.2
HMG20B-211ENST00000486028 GRIN1Q05586 938 aa13.79□□□□□ -0.2
HMG20B-211ENST00000486028 CAPSQ13938 189 aa13.79□□□□□ -0.2
HMG20B-211ENST00000486028 PPP2R5AQ15172 486 aa13.79□□□□□ -0.2
HMG20B-211ENST00000486028 STK38Q15208 465 aa13.79□□□□□ -0.2
HMG20B-211ENST00000486028 TMEM119Q4V9L6 283 aa13.79□□□□□ -0.2
HMG20B-211ENST00000486028 ATL3Q6DD88 541 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms