RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 CBWD3Q5JTY5 395 aa24.38■■□□□ 1.49
CLN5-202ENST00000485938 CBWD5Q5RIA9 395 aa24.38■■□□□ 1.49
CLN5-202ENST00000485938 ADAT2Q7Z6V5 191 aaKnown RBP24.38■■□□□ 1.49
CLN5-202ENST00000485938 KCTD17Q8N5Z5 321 aa24.38■■□□□ 1.49
CLN5-202ENST00000485938 MYCT1Q8N699 235 aa24.38■■□□□ 1.49
CLN5-202ENST00000485938 PIGOQ8TEQ8 1089 aa24.38■■□□□ 1.49
CLN5-202ENST00000485938 GLG1Q92896 1179 aa24.38■■□□□ 1.49
CLN5-202ENST00000485938 TAS2R14Q9NYV8 317 aa24.38■■□□□ 1.49
CLN5-202ENST00000485938 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.38■■□□□ 1.49
CLN5-202ENST00000485938 FAM187AA6NFU0 413 aa24.38■■□□□ 1.49
CLN5-202ENST00000485938 PHF20L1A8MW92 1017 aa24.38■■□□□ 1.49
CLN5-202ENST00000485938 NUDT17P0C025 328 aa24.38■■□□□ 1.49
CLN5-202ENST00000485938 KLRC3Q07444 240 aa24.38■■□□□ 1.49
CLN5-202ENST00000485938 HHIPL2Q6UWX4 724 aa24.38■■□□□ 1.49
CLN5-202ENST00000485938 C1orf186Q6ZWK4 172 aa24.38■■□□□ 1.49
CLN5-202ENST00000485938 ALG3Q92685 438 aa24.38■■□□□ 1.49
CLN5-202ENST00000485938 CENPTQ96BT3 561 aa24.38■■□□□ 1.49
CLN5-202ENST00000485938 HSD17B14Q9BPX1 270 aa24.38■■□□□ 1.49
CLN5-202ENST00000485938 INTS2Q9H0H0 1204 aaKnown RBP24.38■■□□□ 1.49
CLN5-202ENST00000485938 THAP2Q9H0W7 228 aa24.38■■□□□ 1.49
CLN5-202ENST00000485938 COG5Q9UP83 839 aa24.38■■□□□ 1.49
CLN5-202ENST00000485938 SHBGP04278 402 aa24.37■■□□□ 1.49
CLN5-202ENST00000485938 ZNF211Q13398 564 aaPredicted RBP24.37■■□□□ 1.49
CLN5-202ENST00000485938 ERMARDQ5T6L9 678 aa24.37■■□□□ 1.49
CLN5-202ENST00000485938 GKAP1Q5VSY0 366 aaPredicted RBP24.37■■□□□ 1.49
CLN5-202ENST00000485938 HOOK3Q86VS8 718 aa24.37■■□□□ 1.49
CLN5-202ENST00000485938 MDM1Q8TC05 714 aa24.37■■□□□ 1.49
CLN5-202ENST00000485938 XPO6Q96QU8 1125 aaKnown RBP24.37■■□□□ 1.49
CLN5-202ENST00000485938 SIPA1L1O43166 1804 aa24.37■■□□□ 1.49
CLN5-202ENST00000485938 OPLAHO14841 1288 aa24.36■■□□□ 1.49
CLN5-202ENST00000485938 TAL1P17542 331 aaPredicted RBP24.36■■□□□ 1.49
CLN5-202ENST00000485938 ADRA2BP18089 450 aa24.36■■□□□ 1.49
CLN5-202ENST00000485938 DHX34Q14147 1143 aaKnown RBP24.36■■□□□ 1.49
CLN5-202ENST00000485938 CTTNQ14247 550 aaKnown RBP24.36■■□□□ 1.49
CLN5-202ENST00000485938 LACTB2Q53H82 288 aaPredicted RBP24.36■■□□□ 1.49
CLN5-202ENST00000485938 PALB2Q86YC2 1186 aa24.36■■□□□ 1.49
CLN5-202ENST00000485938 TEKT1Q969V4 418 aa24.36■■□□□ 1.49
CLN5-202ENST00000485938 PNMA2Q9UL42 364 aa24.36■■□□□ 1.49
CLN5-202ENST00000485938 CERKLQ49MI3 558 aaPredicted RBP24.36■■□□□ 1.49
CLN5-202ENST00000485938 CPLX4Q7Z7G2 160 aa24.36■■□□□ 1.49
CLN5-202ENST00000485938 JAMLQ86YT9 394 aa24.36■■□□□ 1.49
CLN5-202ENST00000485938 KSR1Q8IVT5 923 aa24.36■■□□□ 1.49
CLN5-202ENST00000485938 SP8Q8IXZ3 490 aa24.36■■□□□ 1.49
CLN5-202ENST00000485938 MYCBPQ99417 103 aaPredicted RBP24.36■■□□□ 1.49
CLN5-202ENST00000485938 FAM129AQ9BZQ8 928 aa24.36■■□□□ 1.49
CLN5-202ENST00000485938 PABPC3Q9H361 631 aaKnown RBP24.36■■□□□ 1.49
CLN5-202ENST00000485938 CD248Q9HCU0 757 aa24.36■■□□□ 1.49
CLN5-202ENST00000485938 DMAC2Q9NW81 257 aa24.36■■□□□ 1.49
CLN5-202ENST00000485938 APEX2Q9UBZ4 518 aa24.36■■□□□ 1.49
CLN5-202ENST00000485938 ANKRD62A6NC57 917 aa24.35■■□□□ 1.49
CLN5-202ENST00000485938 CHUKO15111 745 aa24.35■■□□□ 1.49
CLN5-202ENST00000485938 CYP3A4P08684 503 aa24.35■■□□□ 1.49
CLN5-202ENST00000485938 CCDC172P0C7W6 258 aa24.35■■□□□ 1.49
CLN5-202ENST00000485938 VCAM1P19320 739 aa24.35■■□□□ 1.49
CLN5-202ENST00000485938 TNFAIP3P21580 790 aa24.35■■□□□ 1.49
CLN5-202ENST00000485938 HOXA13P31271 388 aaPredicted RBP24.35■■□□□ 1.49
CLN5-202ENST00000485938 CDR1P51861 262 aa24.35■■□□□ 1.49
CLN5-202ENST00000485938 PMS2P54278 862 aa24.35■■□□□ 1.49
CLN5-202ENST00000485938 KIAA1755Q5JYT7 1200 aa24.35■■□□□ 1.49
CLN5-202ENST00000485938 ZDHHC24Q6UX98 284 aa24.35■■□□□ 1.49
CLN5-202ENST00000485938 FIZ1Q96SL8 496 aa24.35■■□□□ 1.49
CLN5-202ENST00000485938 PARVGQ9HBI0 331 aa24.35■■□□□ 1.49
CLN5-202ENST00000485938 KIAA0391O15091 583 aaKnown RBP24.35■■□□□ 1.49
CLN5-202ENST00000485938 TRIM49P0CI25 452 aa24.35■■□□□ 1.49
CLN5-202ENST00000485938 TRIM49CP0CI26 452 aa24.35■■□□□ 1.49
CLN5-202ENST00000485938 DRG2P55039 364 aaKnown RBP24.35■■□□□ 1.49
CLN5-202ENST00000485938 MAPK7Q13164 816 aa24.35■■□□□ 1.49
CLN5-202ENST00000485938 KIF22Q14807 665 aa24.35■■□□□ 1.49
CLN5-202ENST00000485938 CLUL1Q15846 466 aa24.35■■□□□ 1.49
CLN5-202ENST00000485938 FMNL3Q8IVF7 1028 aa24.35■■□□□ 1.49
CLN5-202ENST00000485938 NEK9Q8TD19 979 aa24.35■■□□□ 1.49
CLN5-202ENST00000485938 CHMP6Q96FZ7 201 aa24.35■■□□□ 1.49
CLN5-202ENST00000485938 IGLV3-22A0A075B6J6 115 aa24.34■■□□□ 1.49
CLN5-202ENST00000485938 FAM170AA1A519 330 aa24.34■■□□□ 1.49
CLN5-202ENST00000485938 F5H6K3 240 aa24.34■■□□□ 1.49
CLN5-202ENST00000485938 PPEF1O14829 653 aaPredicted RBP24.34■■□□□ 1.49
CLN5-202ENST00000485938 ZNF76P36508 570 aa24.34■■□□□ 1.49
CLN5-202ENST00000485938 SEPT12Q8IYM1 358 aa24.34■■□□□ 1.49
CLN5-202ENST00000485938 PGM2Q96G03 612 aa24.34■■□□□ 1.49
CLN5-202ENST00000485938 JPH2Q9BR39 696 aaPredicted RBP24.34■■□□□ 1.49
CLN5-202ENST00000485938 TUFT1Q9NNX1 390 aa24.34■■□□□ 1.49
CLN5-202ENST00000485938 AGPAT3Q9NRZ7 376 aa24.34■■□□□ 1.49
CLN5-202ENST00000485938 SLITRK3O94933 977 aa24.34■■□□□ 1.49
CLN5-202ENST00000485938 SCTRP47872 440 aa24.34■■□□□ 1.49
CLN5-202ENST00000485938 CYP2J2P51589 502 aa24.34■■□□□ 1.49
CLN5-202ENST00000485938 PLTPP55058 493 aa24.34■■□□□ 1.49
CLN5-202ENST00000485938 PPP2R5AQ15172 486 aa24.34■■□□□ 1.49
CLN5-202ENST00000485938 SYDE2Q5VT97 1194 aa24.34■■□□□ 1.49
CLN5-202ENST00000485938 ZNF720Q7Z2F6 126 aa24.34■■□□□ 1.49
CLN5-202ENST00000485938 CCT6BQ92526 530 aa24.34■■□□□ 1.49
CLN5-202ENST00000485938 P3H4Q92791 437 aa24.34■■□□□ 1.49
CLN5-202ENST00000485938 ZKSCAN4Q969J2 545 aaPredicted RBP24.34■■□□□ 1.49
CLN5-202ENST00000485938 RNF25Q96BH1 459 aaPredicted RBP24.34■■□□□ 1.49
CLN5-202ENST00000485938 GOPCQ9HD26 462 aa24.34■■□□□ 1.49
CLN5-202ENST00000485938 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.34■■□□□ 1.49
CLN5-202ENST00000485938 FRMD4BQ9Y2L6 1034 aa24.34■■□□□ 1.49
CLN5-202ENST00000485938 SNX24Q9Y343 169 aa24.34■■□□□ 1.49
CLN5-202ENST00000485938 UBE4BO95155 1302 aa24.34■■□□□ 1.49
CLN5-202ENST00000485938 PTGIRP43119 386 aa24.33■■□□□ 1.49
CLN5-202ENST00000485938 HADHBP55084 474 aaKnown RBP24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms