RNA–Protein interactions for RNA: ENST00000485530.5

TRA2B-213, Transcript of transformer 2 beta homolog, human

TSL 2

Gene TRA2B, Length 839 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2B-213	ENST00000485530	STAM	Q92783	540 aa		13.6	□□□□□ -0.23
TRA2B-213	ENST00000485530	SCLY	Q96I15	445 aa		13.6	□□□□□ -0.23
TRA2B-213	ENST00000485530	CDK5RAP3	Q96JB5	506 aa		13.6	□□□□□ -0.23
TRA2B-213	ENST00000485530	ADAMTS10	Q9H324	1103 aa		13.6	□□□□□ -0.23
TRA2B-213	ENST00000485530	EPHX3	Q9H6B9	360 aa		13.6	□□□□□ -0.23
TRA2B-213	ENST00000485530	IL23A	Q9NPF7	189 aa		13.6	□□□□□ -0.23
TRA2B-213	ENST00000485530	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.6	□□□□□ -0.23
TRA2B-213	ENST00000485530	KCNH3	Q9ULD8	1083 aa		13.6	□□□□□ -0.23
TRA2B-213	ENST00000485530	KDM3A	Q9Y4C1	1321 aa		13.6	□□□□□ -0.23
TRA2B-213	ENST00000485530	SFI1	A8K8P3	1242 aa		13.59	□□□□□ -0.23
TRA2B-213	ENST00000485530	PRPF40A	O75400	957 aa	Known RBP	13.59	□□□□□ -0.23
TRA2B-213	ENST00000485530	DGAT1	O75907	488 aa		13.59	□□□□□ -0.23
TRA2B-213	ENST00000485530	POLG	P54098	1239 aa	Predicted RBP	13.59	□□□□□ -0.23
TRA2B-213	ENST00000485530	SNW1	Q13573	536 aa	Known RBP	13.59	□□□□□ -0.23
TRA2B-213	ENST00000485530	AAK1	Q2M2I8	961 aa		13.59	□□□□□ -0.23
TRA2B-213	ENST00000485530	TCTN1	Q2MV58	587 aa		13.59	□□□□□ -0.23
TRA2B-213	ENST00000485530	PPP2R2D	Q66LE6	453 aa		13.59	□□□□□ -0.23
TRA2B-213	ENST00000485530	FSIP1	Q8NA03	581 aa		13.59	□□□□□ -0.23
TRA2B-213	ENST00000485530	ENGASE	Q8NFI3	743 aa		13.59	□□□□□ -0.23
TRA2B-213	ENST00000485530	ASAP3	Q8TDY4	903 aa		13.59	□□□□□ -0.23
TRA2B-213	ENST00000485530	DHX58	Q96C10	678 aa		13.59	□□□□□ -0.23
TRA2B-213	ENST00000485530	PPP1R16B	Q96T49	567 aa		13.59	□□□□□ -0.23
TRA2B-213	ENST00000485530	MTIF3	Q9H2K0	278 aa	Known RBP	13.59	□□□□□ -0.23
TRA2B-213	ENST00000485530	CCDC39	Q9UFE4	941 aa		13.59	□□□□□ -0.23
TRA2B-213	ENST00000485530	SERTAD1	Q9UHV2	236 aa		13.59	□□□□□ -0.23
TRA2B-213	ENST00000485530	PPME1	Q9Y570	386 aa		13.59	□□□□□ -0.23
TRA2B-213	ENST00000485530	MYMK	A6NI61	221 aa		13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	PITPNM1	O00562	1244 aa		13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	ACTN4	O43707	911 aa	Known RBP	13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	NBN	O60934	754 aa		13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	SSB	P05455	408 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	CTSH	P09668	335 aa		13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	SELP	P16109	830 aa		13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	LIG1	P18858	919 aa		13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	RABGGTB	P53611	331 aa		13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	NLRP11	P59045	1033 aa	Known RBP	13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	RAD51AP2	Q09MP3	1159 aa		13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	BFSP2	Q13515	415 aa		13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	GIT2	Q14161	759 aa		13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	KIZ	Q2M2Z5	673 aa		13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	TMEM31	Q5JXX7	168 aa		13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	IER5	Q5VY09	327 aa		13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	CCDC73	Q6ZRK6	1079 aa		13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	NME8	Q8N427	588 aa		13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	RETREG2	Q8NC44	543 aa		13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	CAGE1	Q8TC20	777 aa		13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	TMEM40	Q8WWA1	233 aa		13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	SLC7A3	Q8WY07	619 aa		13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	BSND	Q8WZ55	320 aa		13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	LARP4B	Q92615	738 aa	Known RBP	13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	CELF4	Q9BZC1	486 aa	Known RBP	13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	KBTBD4	Q9NVX7	518 aa		13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	FAM13B	Q9NYF5	915 aa		13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	STK17A	Q9UEE5	414 aa		13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	CDY2A	Q9Y6F7	541 aa		13.58	□□□□□ -0.24
TRA2B-213	ENST00000485530	RSPH10B2	B2RC85	870 aa		13.57	□□□□□ -0.24
TRA2B-213	ENST00000485530	CSDE1	O75534	798 aa	Known RBP	13.57	□□□□□ -0.24
TRA2B-213	ENST00000485530	RSPH10B	P0C881	870 aa		13.57	□□□□□ -0.24
TRA2B-213	ENST00000485530	GLRA2	P23416	452 aa		13.57	□□□□□ -0.24
TRA2B-213	ENST00000485530	CASP1	P29466	404 aa		13.57	□□□□□ -0.24
TRA2B-213	ENST00000485530	TXLNA	P40222	546 aa		13.57	□□□□□ -0.24
TRA2B-213	ENST00000485530	STAT6	P42226	847 aa		13.57	□□□□□ -0.24
TRA2B-213	ENST00000485530	GPC3	P51654	580 aa		13.57	□□□□□ -0.24
TRA2B-213	ENST00000485530	MRPS6	P82932	125 aa	Known RBP	13.57	□□□□□ -0.24
TRA2B-213	ENST00000485530	CACNB1	Q02641	598 aa	Predicted RBP	13.57	□□□□□ -0.24
TRA2B-213	ENST00000485530	LAMTOR4	Q0VGL1	99 aa		13.57	□□□□□ -0.24
TRA2B-213	ENST00000485530	FAM102B	Q5T8I3	360 aa		13.57	□□□□□ -0.24
TRA2B-213	ENST00000485530	LRRC8D	Q7L1W4	858 aa		13.57	□□□□□ -0.24
TRA2B-213	ENST00000485530	OTOP2	Q7RTS6	562 aa		13.57	□□□□□ -0.24
TRA2B-213	ENST00000485530	GPBP1	Q86WP2	473 aa		13.57	□□□□□ -0.24
TRA2B-213	ENST00000485530	GRAMD1C	Q8IYS0	662 aa		13.57	□□□□□ -0.24
TRA2B-213	ENST00000485530	IQUB	Q8NA54	791 aa		13.57	□□□□□ -0.24
TRA2B-213	ENST00000485530	RASSF8	Q8NHQ8	419 aa		13.57	□□□□□ -0.24
TRA2B-213	ENST00000485530	MRPS27	Q92552	414 aa	Known RBP	13.57	□□□□□ -0.24
TRA2B-213	ENST00000485530	DNAJC19	Q96DA6	116 aa		13.57	□□□□□ -0.24
TRA2B-213	ENST00000485530	AGO3	Q9H9G7	860 aa	Known RBP	13.57	□□□□□ -0.24
TRA2B-213	ENST00000485530	ATP6V0A4	Q9HBG4	840 aa		13.57	□□□□□ -0.24
TRA2B-213	ENST00000485530	C11orf16	Q9NQ32	467 aa		13.57	□□□□□ -0.24
TRA2B-213	ENST00000485530	LMBRD1	Q9NUN5	540 aa		13.57	□□□□□ -0.24
TRA2B-213	ENST00000485530	AKT3	Q9Y243	479 aa		13.57	□□□□□ -0.24
TRA2B-213	ENST00000485530	MUC6	Q6W4X9	2439 aa		13.56	□□□□□ -0.24
TRA2B-213	ENST00000485530		A0A087WZ62	844 aa		13.56	□□□□□ -0.24
TRA2B-213	ENST00000485530	HIP1R	O75146	1068 aa		13.56	□□□□□ -0.24
TRA2B-213	ENST00000485530	ZNF202	O95125	648 aa		13.56	□□□□□ -0.24
TRA2B-213	ENST00000485530	FGB	P02675	491 aa		13.56	□□□□□ -0.24
TRA2B-213	ENST00000485530	SRGAP2C	P0DJJ0	459 aa		13.56	□□□□□ -0.24
TRA2B-213	ENST00000485530	MYOG	P15173	224 aa		13.56	□□□□□ -0.24
TRA2B-213	ENST00000485530	GUCY2C	P25092	1073 aa		13.56	□□□□□ -0.24
TRA2B-213	ENST00000485530	TMOD1	P28289	359 aa		13.56	□□□□□ -0.24
TRA2B-213	ENST00000485530	DNM2	P50570	870 aa		13.56	□□□□□ -0.24
TRA2B-213	ENST00000485530	LPIN1	Q14693	890 aa		13.56	□□□□□ -0.24
TRA2B-213	ENST00000485530	SKIV2L	Q15477	1246 aa	Known RBP	13.56	□□□□□ -0.24
TRA2B-213	ENST00000485530	SV2B	Q7L1I2	683 aa		13.56	□□□□□ -0.24
TRA2B-213	ENST00000485530	RHPN2	Q8IUC4	686 aa		13.56	□□□□□ -0.24
TRA2B-213	ENST00000485530	EXOC8	Q8IYI6	725 aa		13.56	□□□□□ -0.24
TRA2B-213	ENST00000485530	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
TRA2B-213	ENST00000485530	REEP2	Q9BRK0	252 aa		13.56	□□□□□ -0.24
TRA2B-213	ENST00000485530	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.56	□□□□□ -0.24
TRA2B-213	ENST00000485530	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms