RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.03■□□□□ 0.16
LRIF1-202ENST00000485275 ST6GALNAC4Q9H4F1 302 aa16.03■□□□□ 0.16
LRIF1-202ENST00000485275 ARHGAP28Q9P2N2 729 aa16.03■□□□□ 0.16
LRIF1-202ENST00000485275 CCDC169A6NNP5 214 aa16.03■□□□□ 0.16
LRIF1-202ENST00000485275 TISP43B9A030 160 aa16.03■□□□□ 0.16
LRIF1-202ENST00000485275 MYCP01106 439 aaPredicted RBP16.03■□□□□ 0.16
LRIF1-202ENST00000485275 MYCNP04198 464 aaPredicted RBP16.03■□□□□ 0.16
LRIF1-202ENST00000485275 EDN1P05305 212 aa16.03■□□□□ 0.16
LRIF1-202ENST00000485275 HSPA1AP0DMV8 641 aaKnown RBP16.03■□□□□ 0.16
LRIF1-202ENST00000485275 HSPA1BP0DMV9 641 aaKnown RBP16.03■□□□□ 0.16
LRIF1-202ENST00000485275 MAPTP10636 758 aaKnown RBP16.03■□□□□ 0.16
LRIF1-202ENST00000485275 LBX1P52954 281 aa16.03■□□□□ 0.16
LRIF1-202ENST00000485275 ZNF200P98182 395 aaPredicted RBP16.03■□□□□ 0.16
LRIF1-202ENST00000485275 GTF2BQ00403 316 aa16.03■□□□□ 0.16
LRIF1-202ENST00000485275 UVSSAQ2YD98 709 aa16.03■□□□□ 0.16
LRIF1-202ENST00000485275 L1TD1Q5T7N2 865 aaKnown RBP16.03■□□□□ 0.16
LRIF1-202ENST00000485275 CDKAL1Q5VV42 579 aa16.03■□□□□ 0.16
LRIF1-202ENST00000485275 LRRC55Q6ZSA7 311 aa16.03■□□□□ 0.16
LRIF1-202ENST00000485275 ZNF668Q96K58 619 aaPredicted RBP16.03■□□□□ 0.16
LRIF1-202ENST00000485275 MTG1Q9BT17 334 aaPredicted RBP16.03■□□□□ 0.16
LRIF1-202ENST00000485275 C17orf75Q9HAS0 396 aa16.03■□□□□ 0.16
LRIF1-202ENST00000485275 HDAC6Q9UBN7 1215 aa16.03■□□□□ 0.16
LRIF1-202ENST00000485275 GRIN2DO15399 1336 aa16.02■□□□□ 0.16
LRIF1-202ENST00000485275 MBLAC1A4D2B0 266 aaPredicted RBP16.02■□□□□ 0.15
LRIF1-202ENST00000485275 SMTNL1A8MU46 457 aa16.02■□□□□ 0.15
LRIF1-202ENST00000485275 GOLGA6L19H0YKK7 550 aa16.02■□□□□ 0.15
LRIF1-202ENST00000485275 PPP1R2P41236 205 aa16.02■□□□□ 0.15
LRIF1-202ENST00000485275 KNOP1Q1ED39 458 aaKnown RBP16.02■□□□□ 0.15
LRIF1-202ENST00000485275 RUFY4Q6ZNE9 571 aa16.02■□□□□ 0.15
LRIF1-202ENST00000485275 METTL13Q8N6R0 699 aa16.02■□□□□ 0.15
LRIF1-202ENST00000485275 SPC25Q9HBM1 224 aa16.02■□□□□ 0.15
LRIF1-202ENST00000485275 KMT5AQ9NQR1 393 aa16.02■□□□□ 0.15
LRIF1-202ENST00000485275 PAK6Q9NQU5 681 aaPredicted RBP16.02■□□□□ 0.15
LRIF1-202ENST00000485275 UBE4BO95155 1302 aa16.02■□□□□ 0.15
LRIF1-202ENST00000485275 NRCAMQ92823 1304 aa16.02■□□□□ 0.15
LRIF1-202ENST00000485275 DENND3A2RUS2 1198 aa16.01■□□□□ 0.15
LRIF1-202ENST00000485275 GAS2O43903 313 aaKnown RBP16.01■□□□□ 0.15
LRIF1-202ENST00000485275 NAMPTP43490 491 aa16.01■□□□□ 0.15
LRIF1-202ENST00000485275 LAMTOR4Q0VGL1 99 aa16.01■□□□□ 0.15
LRIF1-202ENST00000485275 SLC9C1Q4G0N8 1177 aa16.01■□□□□ 0.15
LRIF1-202ENST00000485275 IER5Q5VY09 327 aa16.01■□□□□ 0.15
LRIF1-202ENST00000485275 APTXQ7Z2E3 356 aaKnown RBP16.01■□□□□ 0.15
LRIF1-202ENST00000485275 KATNAL1Q9BW62 490 aa16.01■□□□□ 0.15
LRIF1-202ENST00000485275 SUCLA2Q9P2R7 463 aaPredicted RBP16.01■□□□□ 0.15
LRIF1-202ENST00000485275 USP20Q9Y2K6 914 aa16.01■□□□□ 0.15
LRIF1-202ENST00000485275 MKI67P46013 3256 aaKnown RBP16.01■□□□□ 0.15
LRIF1-202ENST00000485275 LRRIQ4A6NIV6 560 aa16■□□□□ 0.15
LRIF1-202ENST00000485275 TREHO43280 583 aa16■□□□□ 0.15
LRIF1-202ENST00000485275 VTNP04004 478 aa16■□□□□ 0.15
LRIF1-202ENST00000485275 LRRC63Q05C16 580 aa16■□□□□ 0.15
LRIF1-202ENST00000485275 NBPF20Q3BBV1 942 aa16■□□□□ 0.15
LRIF1-202ENST00000485275 NFRKBQ6P4R8 1299 aa16■□□□□ 0.15
LRIF1-202ENST00000485275 RHPN2Q8IUC4 686 aa16■□□□□ 0.15
LRIF1-202ENST00000485275 ZC3H3Q8IXZ2 948 aaKnown RBP16■□□□□ 0.15
LRIF1-202ENST00000485275 PSPC1Q8WXF1 523 aaKnown RBP16■□□□□ 0.15
LRIF1-202ENST00000485275 CTAGE1Q96RT6 745 aa16■□□□□ 0.15
LRIF1-202ENST00000485275 PPP1R16BQ96T49 567 aa16■□□□□ 0.15
LRIF1-202ENST00000485275 TRAF3IP3Q9Y228 551 aa16■□□□□ 0.15
LRIF1-202ENST00000485275 BICDL2A1A5D9 508 aa16■□□□□ 0.15
LRIF1-202ENST00000485275 MSCO60682 206 aa16■□□□□ 0.15
LRIF1-202ENST00000485275 KPNA6O60684 536 aa16■□□□□ 0.15
LRIF1-202ENST00000485275 CDCA2Q69YH5 1023 aaPredicted RBP16■□□□□ 0.15
LRIF1-202ENST00000485275 SLC39A4Q6P5W5 647 aa16■□□□□ 0.15
LRIF1-202ENST00000485275 FOXR2Q6PJQ5 311 aa16■□□□□ 0.15
LRIF1-202ENST00000485275 MAP4K3Q8IVH8 894 aa16■□□□□ 0.15
LRIF1-202ENST00000485275 KIAA0319LQ8IZA0 1049 aa16■□□□□ 0.15
LRIF1-202ENST00000485275 CSGALNACT2Q8N6G5 542 aa16■□□□□ 0.15
LRIF1-202ENST00000485275 TCP11Q8WWU5 503 aa16■□□□□ 0.15
LRIF1-202ENST00000485275 KCNN1Q92952 543 aa16■□□□□ 0.15
LRIF1-202ENST00000485275 IFT74Q96LB3 600 aa16■□□□□ 0.15
LRIF1-202ENST00000485275 SRRTQ9BXP5 876 aaKnown RBP16■□□□□ 0.15
LRIF1-202ENST00000485275 TYW1Q9NV66 732 aaKnown RBP16■□□□□ 0.15
LRIF1-202ENST00000485275 TBX20Q9UMR3 447 aa16■□□□□ 0.15
LRIF1-202ENST00000485275 PCDHB13Q9Y5F0 798 aa16■□□□□ 0.15
LRIF1-202ENST00000485275 TTLL13PA6NNM8 815 aa15.99■□□□□ 0.15
LRIF1-202ENST00000485275 MAGEB2O15479 319 aa15.99■□□□□ 0.15
LRIF1-202ENST00000485275 ACLYP53396 1101 aa15.99■□□□□ 0.15
LRIF1-202ENST00000485275 CTU1Q7Z7A3 348 aaKnown RBP15.99■□□□□ 0.15
LRIF1-202ENST00000485275 RNF149Q8NC42 400 aa15.99■□□□□ 0.15
LRIF1-202ENST00000485275 RETREG2Q8NC44 543 aa15.99■□□□□ 0.15
LRIF1-202ENST00000485275 NLRP4Q96MN2 994 aa15.99■□□□□ 0.15
LRIF1-202ENST00000485275 JPH2Q9BR39 696 aaPredicted RBP15.99■□□□□ 0.15
LRIF1-202ENST00000485275 CCDC113Q9H0I3 377 aa15.99■□□□□ 0.15
LRIF1-202ENST00000485275 MINDY3Q9H8M7 445 aa15.99■□□□□ 0.15
LRIF1-202ENST00000485275 IFT122Q9HBG6 1241 aa15.99■□□□□ 0.15
LRIF1-202ENST00000485275 GTF2IRD1Q9UHL9 959 aa15.99■□□□□ 0.15
LRIF1-202ENST00000485275 RRN3P2A6NIE6 340 aa15.98■□□□□ 0.15
LRIF1-202ENST00000485275 PDXKO00764 312 aa15.98■□□□□ 0.15
LRIF1-202ENST00000485275 CLIC2O15247 247 aa15.98■□□□□ 0.15
LRIF1-202ENST00000485275 SRGAP2CP0DJJ0 459 aa15.98■□□□□ 0.15
LRIF1-202ENST00000485275 CCL5P13501 91 aa15.98■□□□□ 0.15
LRIF1-202ENST00000485275 SMTNP53814 917 aa15.98■□□□□ 0.15
LRIF1-202ENST00000485275 PLCB2Q00722 1185 aa15.98■□□□□ 0.15
LRIF1-202ENST00000485275 ALCAMQ13740 583 aa15.98■□□□□ 0.15
LRIF1-202ENST00000485275 GDF6Q6KF10 455 aaPredicted RBP15.98■□□□□ 0.15
LRIF1-202ENST00000485275 SARM1Q6SZW1 724 aa15.98■□□□□ 0.15
LRIF1-202ENST00000485275 RNF180Q86T96 592 aa15.98■□□□□ 0.15
LRIF1-202ENST00000485275 EXOC8Q8IYI6 725 aa15.98■□□□□ 0.15
LRIF1-202ENST00000485275 C7orf31Q8N865 590 aa15.98■□□□□ 0.15
LRIF1-202ENST00000485275 WNT8BQ93098 351 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms