RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 FIBCD1Q8N539 461 aa21.27■■□□□ 1
SNX17-206ENST00000484886 MCPH1Q8NEM0 835 aa21.27■■□□□ 1
SNX17-206ENST00000484886 CDK5RAP3Q96JB5 506 aa21.27■■□□□ 1
SNX17-206ENST00000484886 BHMT2Q9H2M3 363 aa21.27■■□□□ 1
SNX17-206ENST00000484886 ADGRA3Q8IWK6 1321 aa21.27■□□□□ 0.99
SNX17-206ENST00000484886 CEBPZQ03701 1054 aaKnown RBP21.26■□□□□ 0.99
SNX17-206ENST00000484886 BTG3Q14201 252 aaPredicted RBP21.26■□□□□ 0.99
SNX17-206ENST00000484886 DSC3Q14574 896 aa21.26■□□□□ 0.99
SNX17-206ENST00000484886 PAN2Q504Q3 1202 aaKnown RBP21.26■□□□□ 0.99
SNX17-206ENST00000484886 FAM173BQ6P4H8 233 aa21.26■□□□□ 0.99
SNX17-206ENST00000484886 RNF169Q8NCN4 708 aa21.26■□□□□ 0.99
SNX17-206ENST00000484886 SP7Q8TDD2 431 aaPredicted RBP21.26■□□□□ 0.99
SNX17-206ENST00000484886 ASAP3Q8TDY4 903 aa21.26■□□□□ 0.99
SNX17-206ENST00000484886 ZSCAN16Q9H4T2 348 aaPredicted RBP21.26■□□□□ 0.99
SNX17-206ENST00000484886 IFT122Q9HBG6 1241 aa21.26■□□□□ 0.99
SNX17-206ENST00000484886 DNM3Q9UQ16 869 aa21.26■□□□□ 0.99
SNX17-206ENST00000484886 PIN4Q9Y237 131 aaKnown RBP21.26■□□□□ 0.99
SNX17-206ENST00000484886 C9IYK1 514 aa21.25■□□□□ 0.99
SNX17-206ENST00000484886 RFXAPO00287 272 aa21.25■□□□□ 0.99
SNX17-206ENST00000484886 FOXD4L5Q5VV16 416 aaPredicted RBP21.25■□□□□ 0.99
SNX17-206ENST00000484886 TWF2Q6IBS0 349 aaKnown RBP21.25■□□□□ 0.99
SNX17-206ENST00000484886 SRGAP1Q7Z6B7 1085 aa21.25■□□□□ 0.99
SNX17-206ENST00000484886 MAFAQ8NHW3 353 aaPredicted RBP21.25■□□□□ 0.99
SNX17-206ENST00000484886 FOXD4L4Q8WXT5 416 aaPredicted RBP21.25■□□□□ 0.99
SNX17-206ENST00000484886 GPRC5CQ9NQ84 441 aa21.25■□□□□ 0.99
SNX17-206ENST00000484886 DACT1Q9NYF0 836 aa21.25■□□□□ 0.99
SNX17-206ENST00000484886 CLIC4Q9Y696 253 aa21.25■□□□□ 0.99
SNX17-206ENST00000484886 EPOPA6NHQ4 379 aa21.24■□□□□ 0.99
SNX17-206ENST00000484886 E9PMD0 336 aa21.24■□□□□ 0.99
SNX17-206ENST00000484886 DGKIO75912 1065 aa21.24■□□□□ 0.99
SNX17-206ENST00000484886 ARL2P36404 184 aa21.24■□□□□ 0.99
SNX17-206ENST00000484886 ERVK-21P61565 698 aa21.24■□□□□ 0.99
SNX17-206ENST00000484886 MICALL1Q8N3F8 863 aa21.24■□□□□ 0.99
SNX17-206ENST00000484886 FBXO22Q8NEZ5 403 aa21.24■□□□□ 0.99
SNX17-206ENST00000484886 RASSF8Q8NHQ8 419 aa21.24■□□□□ 0.99
SNX17-206ENST00000484886 PLIN2Q99541 437 aa21.24■□□□□ 0.99
SNX17-206ENST00000484886 C17orf80Q9BSJ5 609 aa21.24■□□□□ 0.99
SNX17-206ENST00000484886 LRRIQ4A6NIV6 560 aa21.23■□□□□ 0.99
SNX17-206ENST00000484886 INO80B-WBP1J3KQ70 363 aa21.23■□□□□ 0.99
SNX17-206ENST00000484886 GTPBP6O43824 516 aaPredicted RBP21.23■□□□□ 0.99
SNX17-206ENST00000484886 ERLIN2O94905 339 aa21.23■□□□□ 0.99
SNX17-206ENST00000484886 SSBP05455 408 aaKnown RBP eCLIP21.23■□□□□ 0.99
SNX17-206ENST00000484886 GLRA2P23416 452 aa21.23■□□□□ 0.99
SNX17-206ENST00000484886 UBA7P41226 1012 aa21.23■□□□□ 0.99
SNX17-206ENST00000484886 GATMP50440 423 aa21.23■□□□□ 0.99
SNX17-206ENST00000484886 CAPSQ13938 189 aa21.23■□□□□ 0.99
SNX17-206ENST00000484886 CABP7Q86V35 215 aa21.23■□□□□ 0.99
SNX17-206ENST00000484886 GDPD5Q8WTR4 605 aa21.23■□□□□ 0.99
SNX17-206ENST00000484886 PPM1EQ8WY54 764 aa21.23■□□□□ 0.99
SNX17-206ENST00000484886 AK8Q96MA6 479 aa21.23■□□□□ 0.99
SNX17-206ENST00000484886 MMTAG2Q9BU76 263 aaKnown RBP21.23■□□□□ 0.99
SNX17-206ENST00000484886 NT5C3AQ9H0P0 336 aa21.23■□□□□ 0.99
SNX17-206ENST00000484886 MINDY3Q9H8M7 445 aa21.23■□□□□ 0.99
SNX17-206ENST00000484886 CHST12Q9NRB3 414 aa21.23■□□□□ 0.99
SNX17-206ENST00000484886 TMEM161AQ9NX61 479 aa21.23■□□□□ 0.99
SNX17-206ENST00000484886 CHD9Q3L8U1 2897 aa21.23■□□□□ 0.99
SNX17-206ENST00000484886 TBKBP1A7MCY6 615 aa21.22■□□□□ 0.99
SNX17-206ENST00000484886 EYA4O95677 639 aa21.22■□□□□ 0.99
SNX17-206ENST00000484886 CYP11B2P19099 503 aa21.22■□□□□ 0.99
SNX17-206ENST00000484886 CTNNB1P35222 781 aa21.22■□□□□ 0.99
SNX17-206ENST00000484886 ADGRE1Q14246 886 aa21.22■□□□□ 0.99
SNX17-206ENST00000484886 TMEM192Q8IY95 271 aa21.22■□□□□ 0.99
SNX17-206ENST00000484886 CMTR2Q8IYT2 770 aaKnown RBP21.22■□□□□ 0.99
SNX17-206ENST00000484886 ZNF689Q96CS4 500 aaPredicted RBP21.22■□□□□ 0.99
SNX17-206ENST00000484886 SAMD11Q96NU1 681 aa21.22■□□□□ 0.99
SNX17-206ENST00000484886 NLRC5Q86WI3 1866 aa21.22■□□□□ 0.99
SNX17-206ENST00000484886 COL4A4P53420 1690 aaPredicted RBP21.21■□□□□ 0.99
SNX17-206ENST00000484886 COL4A6Q14031 1691 aa21.21■□□□□ 0.99
SNX17-206ENST00000484886 FGFR1P11362 822 aa21.21■□□□□ 0.99
SNX17-206ENST00000484886 MARCKSP29966 332 aaPredicted RBP21.21■□□□□ 0.99
SNX17-206ENST00000484886 LONP1P36776 959 aaKnown RBP21.21■□□□□ 0.99
SNX17-206ENST00000484886 PTENP60484 403 aa21.21■□□□□ 0.99
SNX17-206ENST00000484886 NCBP1Q09161 790 aaKnown RBP21.21■□□□□ 0.99
SNX17-206ENST00000484886 GRB10Q13322 594 aa21.21■□□□□ 0.99
SNX17-206ENST00000484886 EPC2Q52LR7 807 aa21.21■□□□□ 0.99
SNX17-206ENST00000484886 ECHDC2Q86YB7 292 aa21.21■□□□□ 0.99
SNX17-206ENST00000484886 ABI1Q8IZP0 508 aa21.21■□□□□ 0.99
SNX17-206ENST00000484886 CRIPAKQ8N1N5 446 aa21.21■□□□□ 0.99
SNX17-206ENST00000484886 CALML4Q96GE6 196 aa21.21■□□□□ 0.99
SNX17-206ENST00000484886 ELAC1Q9H777 363 aaKnown RBP21.21■□□□□ 0.99
SNX17-206ENST00000484886 RC3H2Q9HBD1 1191 aaKnown RBP21.21■□□□□ 0.99
SNX17-206ENST00000484886 AGPAT5Q9NUQ2 364 aa21.21■□□□□ 0.99
SNX17-206ENST00000484886 HOXA2O43364 376 aa21.2■□□□□ 0.98
SNX17-206ENST00000484886 PDIA4P13667 645 aaKnown RBP21.2■□□□□ 0.98
SNX17-206ENST00000484886 FAM189BP81408 668 aa21.2■□□□□ 0.98
SNX17-206ENST00000484886 CCDC85BQ15834 202 aaPredicted RBP21.2■□□□□ 0.98
SNX17-206ENST00000484886 SPOUT1Q5T280 376 aaKnown RBP21.2■□□□□ 0.98
SNX17-206ENST00000484886 KCNK18Q7Z418 384 aa21.2■□□□□ 0.98
SNX17-206ENST00000484886 ZBTB8OSQ8IWT0 167 aa21.2■□□□□ 0.98
SNX17-206ENST00000484886 IFT74Q96LB3 600 aa21.2■□□□□ 0.98
SNX17-206ENST00000484886 ZNF396Q96N95 335 aaPredicted RBP21.2■□□□□ 0.98
SNX17-206ENST00000484886 POLD4Q9HCU8 107 aa21.2■□□□□ 0.98
SNX17-206ENST00000484886 RWDD3Q9Y3V2 267 aa21.2■□□□□ 0.98
SNX17-206ENST00000484886 MRPL42Q9Y6G3 142 aaKnown RBP21.2■□□□□ 0.98
SNX17-206ENST00000484886 A0A0U1RQF3 1178 aa21.19■□□□□ 0.98
SNX17-206ENST00000484886 ZSCAN22P10073 491 aaPredicted RBP21.19■□□□□ 0.98
SNX17-206ENST00000484886 GRIN1Q05586 938 aa21.19■□□□□ 0.98
SNX17-206ENST00000484886 POU5F1BQ06416 359 aa21.19■□□□□ 0.98
SNX17-206ENST00000484886 PPP2R5AQ15172 486 aa21.19■□□□□ 0.98
SNX17-206ENST00000484886 PTPAQ15257 358 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms