RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 SRGAP2CP0DJJ0 459 aa14.39□□□□□ -0.11
HDAC1-209ENST00000484305 FGFR1P11362 822 aa14.39□□□□□ -0.11
HDAC1-209ENST00000484305 TFF2Q03403 129 aa14.39□□□□□ -0.11
HDAC1-209ENST00000484305 LAMTOR4Q0VGL1 99 aa14.39□□□□□ -0.11
HDAC1-209ENST00000484305 MCTP1Q6DN14 999 aa14.39□□□□□ -0.11
HDAC1-209ENST00000484305 ATXN2LQ8WWM7 1075 aaKnown RBP14.39□□□□□ -0.11
HDAC1-209ENST00000484305 PSPC1Q8WXF1 523 aaKnown RBP14.39□□□□□ -0.11
HDAC1-209ENST00000484305 MRPL38Q96DV4 380 aaKnown RBP14.39□□□□□ -0.11
HDAC1-209ENST00000484305 C11orf84Q9BUA3 381 aaPredicted RBP14.39□□□□□ -0.11
HDAC1-209ENST00000484305 ELAC1Q9H777 363 aaKnown RBP14.39□□□□□ -0.11
HDAC1-209ENST00000484305 ATP6V0A4Q9HBG4 840 aa14.39□□□□□ -0.11
HDAC1-209ENST00000484305 ANKEF1Q9NU02 776 aa14.39□□□□□ -0.11
HDAC1-209ENST00000484305 VCANP13611 3396 aa14.39□□□□□ -0.11
HDAC1-209ENST00000484305 PLXNA4Q9HCM2 1894 aa14.38□□□□□ -0.11
HDAC1-209ENST00000484305 GAS2O43903 313 aaKnown RBP14.38□□□□□ -0.11
HDAC1-209ENST00000484305 SFPQP23246 707 aaKnown RBP eCLIP14.38□□□□□ -0.11
HDAC1-209ENST00000484305 RARRES1P49788 294 aa14.38□□□□□ -0.11
HDAC1-209ENST00000484305 MRPS5P82675 430 aaKnown RBP14.38□□□□□ -0.11
HDAC1-209ENST00000484305 PTGDRQ13258 359 aa14.38□□□□□ -0.11
HDAC1-209ENST00000484305 PTPROQ16827 1216 aa14.38□□□□□ -0.11
HDAC1-209ENST00000484305 FERMT3Q86UX7 667 aa14.38□□□□□ -0.11
HDAC1-209ENST00000484305 ECHDC2Q86YB7 292 aa14.38□□□□□ -0.11
HDAC1-209ENST00000484305 TCP11Q8WWU5 503 aa14.38□□□□□ -0.11
HDAC1-209ENST00000484305 ASB2Q96Q27 587 aa14.38□□□□□ -0.11
HDAC1-209ENST00000484305 MTRQ99707 1265 aa14.38□□□□□ -0.11
HDAC1-209ENST00000484305 POLR3CQ9BUI4 534 aaPredicted RBP14.38□□□□□ -0.11
HDAC1-209ENST00000484305 PLVAPQ9BX97 442 aa14.38□□□□□ -0.11
HDAC1-209ENST00000484305 INO80BQ9C086 356 aaPredicted RBP14.38□□□□□ -0.11
HDAC1-209ENST00000484305 MINDY3Q9H8M7 445 aa14.38□□□□□ -0.11
HDAC1-209ENST00000484305 TUFT1Q9NNX1 390 aa14.38□□□□□ -0.11
HDAC1-209ENST00000484305 ALG13Q9NP73 1137 aaKnown RBP14.38□□□□□ -0.11
HDAC1-209ENST00000484305 CHST12Q9NRB3 414 aa14.38□□□□□ -0.11
HDAC1-209ENST00000484305 RNF19AQ9NV58 838 aa14.38□□□□□ -0.11
HDAC1-209ENST00000484305 HCSTQ9UBK5 93 aa14.38□□□□□ -0.11
HDAC1-209ENST00000484305 SMC3Q9UQE7 1217 aa14.38□□□□□ -0.11
HDAC1-209ENST00000484305 TCF20Q9UGU0 1960 aaKnown RBP14.38□□□□□ -0.11
HDAC1-209ENST00000484305 CUL9Q8IWT3 2517 aa14.37□□□□□ -0.11
HDAC1-209ENST00000484305 A0A0U1RQF3 1178 aa14.37□□□□□ -0.11
HDAC1-209ENST00000484305 ASAP2O43150 1006 aa14.37□□□□□ -0.11
HDAC1-209ENST00000484305 DGAT1O75907 488 aa14.37□□□□□ -0.11
HDAC1-209ENST00000484305 XRCC6P12956 609 aaKnown RBP eCLIP14.37□□□□□ -0.11
HDAC1-209ENST00000484305 ATF7P17544 494 aaPredicted RBP14.37□□□□□ -0.11
HDAC1-209ENST00000484305 TJAP1Q5JTD0 557 aa14.37□□□□□ -0.11
HDAC1-209ENST00000484305 CATSPER4Q7RTX7 472 aa14.37□□□□□ -0.11
HDAC1-209ENST00000484305 ZNF598Q86UK7 904 aaKnown RBP14.37□□□□□ -0.11
HDAC1-209ENST00000484305 RNF149Q8NC42 400 aa14.37□□□□□ -0.11
HDAC1-209ENST00000484305 RNF169Q8NCN4 708 aa14.37□□□□□ -0.11
HDAC1-209ENST00000484305 CCDC43Q96MW1 224 aaKnown RBP14.37□□□□□ -0.11
HDAC1-209ENST00000484305 CASD1Q96PB1 797 aa14.37□□□□□ -0.11
HDAC1-209ENST00000484305 TYW1Q9NV66 732 aaKnown RBP14.37□□□□□ -0.11
HDAC1-209ENST00000484305 DACT1Q9NYF0 836 aa14.37□□□□□ -0.11
HDAC1-209ENST00000484305 PLAGL2Q9UPG8 496 aa14.37□□□□□ -0.11
HDAC1-209ENST00000484305 PIN4Q9Y237 131 aaKnown RBP14.37□□□□□ -0.11
HDAC1-209ENST00000484305 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.37□□□□□ -0.11
HDAC1-209ENST00000484305 XIRP2A4UGR9 3374 aa14.36□□□□□ -0.11
HDAC1-209ENST00000484305 H3BQV1 296 aa14.36□□□□□ -0.11
HDAC1-209ENST00000484305 ITGB1P05556 798 aa14.36□□□□□ -0.11
HDAC1-209ENST00000484305 RPA1P27694 616 aa14.36□□□□□ -0.11
HDAC1-209ENST00000484305 FXR2P51116 673 aaKnown RBP eCLIP14.36□□□□□ -0.11
HDAC1-209ENST00000484305 C1QBPQ07021 282 aaKnown RBP14.36□□□□□ -0.11
HDAC1-209ENST00000484305 CAMK1Q14012 370 aa14.36□□□□□ -0.11
HDAC1-209ENST00000484305 CLLU1OSQ5K130 101 aa14.36□□□□□ -0.11
HDAC1-209ENST00000484305 POTEGQ6S5H5 508 aa14.36□□□□□ -0.11
HDAC1-209ENST00000484305 SRGAP1Q7Z6B7 1085 aa14.36□□□□□ -0.11
HDAC1-209ENST00000484305 KLHL23Q8NBE8 558 aa14.36□□□□□ -0.11
HDAC1-209ENST00000484305 ERMNQ8TAM6 284 aa14.36□□□□□ -0.11
HDAC1-209ENST00000484305 ASAP3Q8TDY4 903 aa14.36□□□□□ -0.11
HDAC1-209ENST00000484305 P2RX5Q93086 422 aa14.36□□□□□ -0.11
HDAC1-209ENST00000484305 HLA-CQ95604 372 aa14.36□□□□□ -0.11
HDAC1-209ENST00000484305 NACC1Q96RE7 527 aa14.36□□□□□ -0.11
HDAC1-209ENST00000484305 TMEM117Q9H0C3 514 aa14.36□□□□□ -0.11
HDAC1-209ENST00000484305 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.36□□□□□ -0.11
HDAC1-209ENST00000484305 LRWD1Q9UFC0 647 aa14.36□□□□□ -0.11
HDAC1-209ENST00000484305 COG5Q9UP83 839 aa14.36□□□□□ -0.11
HDAC1-209ENST00000484305 GTF3C3Q9Y5Q9 886 aa14.36□□□□□ -0.11
HDAC1-209ENST00000484305 HOXA2O43364 376 aa14.35□□□□□ -0.11
HDAC1-209ENST00000484305 USO1O60763 962 aaKnown RBP14.35□□□□□ -0.11
HDAC1-209ENST00000484305 CSPG5O95196 566 aa14.35□□□□□ -0.11
HDAC1-209ENST00000484305 EOMESO95936 686 aa14.35□□□□□ -0.11
HDAC1-209ENST00000484305 DNAJB1P25685 340 aa14.35□□□□□ -0.11
HDAC1-209ENST00000484305 HOXA11P31270 313 aaPredicted RBP14.35□□□□□ -0.11
HDAC1-209ENST00000484305 ARL2P36404 184 aa14.35□□□□□ -0.11
HDAC1-209ENST00000484305 PHKA2P46019 1235 aa14.35□□□□□ -0.11
HDAC1-209ENST00000484305 KCNQ1P51787 676 aa14.35□□□□□ -0.11
HDAC1-209ENST00000484305 CUL4AQ13619 759 aa14.35□□□□□ -0.11
HDAC1-209ENST00000484305 PDIA5Q14554 519 aa14.35□□□□□ -0.11
HDAC1-209ENST00000484305 MXD4Q14582 209 aaPredicted RBP14.35□□□□□ -0.11
HDAC1-209ENST00000484305 IL17AQ16552 155 aa14.35□□□□□ -0.11
HDAC1-209ENST00000484305 ECM1Q16610 540 aa14.35□□□□□ -0.11
HDAC1-209ENST00000484305 TIGD5Q53EQ6 642 aa14.35□□□□□ -0.11
HDAC1-209ENST00000484305 NAALADL2Q58DX5 795 aa14.35□□□□□ -0.11
HDAC1-209ENST00000484305 TCEAL5Q5H9L2 206 aa14.35□□□□□ -0.11
HDAC1-209ENST00000484305 SPOUT1Q5T280 376 aaKnown RBP14.35□□□□□ -0.11
HDAC1-209ENST00000484305 LARP1BQ659C4 914 aaKnown RBP14.35□□□□□ -0.11
HDAC1-209ENST00000484305 TWF2Q6IBS0 349 aaKnown RBP14.35□□□□□ -0.11
HDAC1-209ENST00000484305 LRRC55Q6ZSA7 311 aa14.35□□□□□ -0.11
HDAC1-209ENST00000484305 MAEAQ7L5Y9 396 aa14.35□□□□□ -0.11
HDAC1-209ENST00000484305 IGSF22Q8N9C0 903 aa14.35□□□□□ -0.11
HDAC1-209ENST00000484305 SPPL3Q8TCT6 385 aa14.35□□□□□ -0.11
HDAC1-209ENST00000484305 TRAIPQ9BWF2 469 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms