RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 NKX2-4Q9H2Z4 354 aa29.61■■■□□ 2.33
SMDT1-203ENST00000484235 INSL6Q9Y581 213 aa29.61■■■□□ 2.33
SMDT1-203ENST00000484235 DENND3A2RUS2 1198 aa29.6■■■□□ 2.33
SMDT1-203ENST00000484235 CSDE1O75534 798 aaKnown RBP29.6■■■□□ 2.33
SMDT1-203ENST00000484235 UPP2O95045 317 aa29.6■■■□□ 2.33
SMDT1-203ENST00000484235 NASPP49321 788 aaPredicted RBP29.6■■■□□ 2.33
SMDT1-203ENST00000484235 GRIN1Q05586 938 aa29.6■■■□□ 2.33
SMDT1-203ENST00000484235 POU5F1BQ06416 359 aa29.6■■■□□ 2.33
SMDT1-203ENST00000484235 CDK5RAP3Q96JB5 506 aa29.6■■■□□ 2.33
SMDT1-203ENST00000484235 ADAM2Q99965 735 aa29.6■■■□□ 2.33
SMDT1-203ENST00000484235 RGS18Q9NS28 235 aa29.6■■■□□ 2.33
SMDT1-203ENST00000484235 FBXO2Q9UK22 296 aaPredicted RBP29.6■■■□□ 2.33
SMDT1-203ENST00000484235 E9PMD0 336 aa29.59■■■□□ 2.33
SMDT1-203ENST00000484235 CA3P07451 260 aa29.59■■■□□ 2.33
SMDT1-203ENST00000484235 SFPQP23246 707 aaKnown RBP eCLIP29.59■■■□□ 2.33
SMDT1-203ENST00000484235 HTRA4P83105 476 aaPredicted RBP29.59■■■□□ 2.33
SMDT1-203ENST00000484235 TFDP1Q14186 410 aa29.59■■■□□ 2.33
SMDT1-203ENST00000484235 SRGAP1Q7Z6B7 1085 aa29.59■■■□□ 2.33
SMDT1-203ENST00000484235 RNF149Q8NC42 400 aa29.59■■■□□ 2.33
SMDT1-203ENST00000484235 PNMA5Q96PV4 448 aa29.59■■■□□ 2.33
SMDT1-203ENST00000484235 C1orf112Q9NSG2 853 aa29.59■■■□□ 2.33
SMDT1-203ENST00000484235 TFIP11Q9UBB9 837 aaKnown RBP29.59■■■□□ 2.33
SMDT1-203ENST00000484235 MGEA5O60502 916 aa29.58■■■□□ 2.33
SMDT1-203ENST00000484235 ZSCAN20P17040 1043 aaPredicted RBP29.58■■■□□ 2.33
SMDT1-203ENST00000484235 GRB10Q13322 594 aa29.58■■■□□ 2.33
SMDT1-203ENST00000484235 DSC3Q14574 896 aa29.58■■■□□ 2.33
SMDT1-203ENST00000484235 SLC24A5Q71RS6 500 aa29.58■■■□□ 2.33
SMDT1-203ENST00000484235 MAEAQ7L5Y9 396 aa29.58■■■□□ 2.33
SMDT1-203ENST00000484235 MICAL3Q7RTP6 2002 aa29.58■■■□□ 2.33
SMDT1-203ENST00000484235 CALML4Q96GE6 196 aa29.58■■■□□ 2.33
SMDT1-203ENST00000484235 CSRNP2Q9H175 543 aa29.58■■■□□ 2.33
SMDT1-203ENST00000484235 POLR3FQ9H1D9 316 aaPredicted RBP29.58■■■□□ 2.33
SMDT1-203ENST00000484235 RNF216Q9NWF9 866 aaPredicted RBP29.58■■■□□ 2.33
SMDT1-203ENST00000484235 FGFR4P22455 802 aa29.57■■■□□ 2.32
SMDT1-203ENST00000484235 GLRA2P23416 452 aa29.57■■■□□ 2.32
SMDT1-203ENST00000484235 PHKA2P46019 1235 aa29.57■■■□□ 2.32
SMDT1-203ENST00000484235 FAM102BQ5T8I3 360 aa29.57■■■□□ 2.32
SMDT1-203ENST00000484235 PPP2R2DQ66LE6 453 aa29.57■■■□□ 2.32
SMDT1-203ENST00000484235 ATL3Q6DD88 541 aa29.57■■■□□ 2.32
SMDT1-203ENST00000484235 KCNK18Q7Z418 384 aa29.57■■■□□ 2.32
SMDT1-203ENST00000484235 CRIPAKQ8N1N5 446 aa29.57■■■□□ 2.32
SMDT1-203ENST00000484235 LINC00301Q8NCQ3 95 aa29.57■■■□□ 2.32
SMDT1-203ENST00000484235 ASAP3Q8TDY4 903 aa29.57■■■□□ 2.32
SMDT1-203ENST00000484235 GPRC5CQ9NQ84 441 aa29.57■■■□□ 2.32
SMDT1-203ENST00000484235 CHST12Q9NRB3 414 aa29.57■■■□□ 2.32
SMDT1-203ENST00000484235 LOXHD1Q8IVV2 1947 aa29.56■■■□□ 2.32
SMDT1-203ENST00000484235 SARSP49591 514 aaKnown RBP29.56■■■□□ 2.32
SMDT1-203ENST00000484235 PTENP60484 403 aa29.56■■■□□ 2.32
SMDT1-203ENST00000484235 STK38Q15208 465 aa29.56■■■□□ 2.32
SMDT1-203ENST00000484235 TMEM119Q4V9L6 283 aa29.56■■■□□ 2.32
SMDT1-203ENST00000484235 KRI1Q8N9T8 703 aaKnown RBP29.56■■■□□ 2.32
SMDT1-203ENST00000484235 PLIN2Q99541 437 aa29.56■■■□□ 2.32
SMDT1-203ENST00000484235 CCSER1Q9C0I3 900 aa29.56■■■□□ 2.32
SMDT1-203ENST00000484235 ARID2Q68CP9 1835 aa29.56■■■□□ 2.32
SMDT1-203ENST00000484235 BRD1O95696 1058 aa29.55■■■□□ 2.32
SMDT1-203ENST00000484235 STAG3L1P0CL83 205 aa29.55■■■□□ 2.32
SMDT1-203ENST00000484235 FAM189BP81408 668 aa29.55■■■□□ 2.32
SMDT1-203ENST00000484235 CATSPER4Q7RTX7 472 aa29.55■■■□□ 2.32
SMDT1-203ENST00000484235 NPAS4Q8IUM7 802 aa29.55■■■□□ 2.32
SMDT1-203ENST00000484235 YME1L1Q96TA2 773 aa29.55■■■□□ 2.32
SMDT1-203ENST00000484235 NFKBIZQ9BYH8 718 aa29.55■■■□□ 2.32
SMDT1-203ENST00000484235 LCHNA4D1U4 455 aa29.54■■■□□ 2.32
SMDT1-203ENST00000484235 C9IYK1 514 aa29.54■■■□□ 2.32
SMDT1-203ENST00000484235 YEATS4O95619 227 aa29.54■■■□□ 2.32
SMDT1-203ENST00000484235 CAPSQ13938 189 aa29.54■■■□□ 2.32
SMDT1-203ENST00000484235 PCBP1Q15365 356 aaKnown RBP eCLIP29.54■■■□□ 2.32
SMDT1-203ENST00000484235 FOXD4L6Q3SYB3 417 aaPredicted RBP29.54■■■□□ 2.32
SMDT1-203ENST00000484235 FOXD4L3Q6VB84 417 aaPredicted RBP29.54■■■□□ 2.32
SMDT1-203ENST00000484235 IFNLR1Q8IU57 520 aaPredicted RBP29.54■■■□□ 2.32
SMDT1-203ENST00000484235 SYT2Q8N9I0 419 aaPredicted RBP29.54■■■□□ 2.32
SMDT1-203ENST00000484235 CLIC6Q96NY7 704 aa29.54■■■□□ 2.32
SMDT1-203ENST00000484235 MINDY3Q9H8M7 445 aa29.54■■■□□ 2.32
SMDT1-203ENST00000484235 PCDHB7Q9Y5E2 793 aa29.54■■■□□ 2.32
SMDT1-203ENST00000484235 MYO9BQ13459 2157 aa29.53■■■□□ 2.32
SMDT1-203ENST00000484235 SPTLC2O15270 562 aa29.53■■■□□ 2.32
SMDT1-203ENST00000484235 TAP1Q03518 808 aa29.53■■■□□ 2.32
SMDT1-203ENST00000484235 RINT1Q6NUQ1 792 aa29.53■■■□□ 2.32
SMDT1-203ENST00000484235 RASSF8Q8NHQ8 419 aa29.53■■■□□ 2.32
SMDT1-203ENST00000484235 SP7Q8TDD2 431 aaPredicted RBP29.53■■■□□ 2.32
SMDT1-203ENST00000484235 KIFAP3Q92845 792 aa29.53■■■□□ 2.32
SMDT1-203ENST00000484235 EPSTI1Q96J88 318 aa29.53■■■□□ 2.32
SMDT1-203ENST00000484235 DACT1Q9NYF0 836 aa29.53■■■□□ 2.32
SMDT1-203ENST00000484235 DAXXQ9UER7 740 aaPredicted RBP29.53■■■□□ 2.32
SMDT1-203ENST00000484235 CFAP45Q9UL16 551 aa29.53■■■□□ 2.32
SMDT1-203ENST00000484235 LRFN2Q9ULH4 789 aa29.53■■■□□ 2.32
SMDT1-203ENST00000484235 ZDHHC9Q9Y397 364 aa29.53■■■□□ 2.32
SMDT1-203ENST00000484235 PTPRSQ13332 1948 aa29.53■■■□□ 2.32
SMDT1-203ENST00000484235 PPP6R2O75170 966 aa29.52■■■□□ 2.32
SMDT1-203ENST00000484235 PLA2G4BP0C869 781 aa29.52■■■□□ 2.32
SMDT1-203ENST00000484235 SPECC1Q5M775 1068 aa29.52■■■□□ 2.32
SMDT1-203ENST00000484235 C1orf186Q6ZWK4 172 aa29.52■■■□□ 2.32
SMDT1-203ENST00000484235 DGKIO75912 1065 aa29.51■■■□□ 2.31
SMDT1-203ENST00000484235 SSBP05455 408 aaKnown RBP eCLIP29.51■■■□□ 2.31
SMDT1-203ENST00000484235 SLC12A3P55017 1021 aa29.51■■■□□ 2.31
SMDT1-203ENST00000484235 KARSQ15046 597 aaKnown RBP29.51■■■□□ 2.31
SMDT1-203ENST00000484235 USP49Q70CQ1 688 aa29.51■■■□□ 2.31
SMDT1-203ENST00000484235 SYMPKQ92797 1274 aaKnown RBP29.51■■■□□ 2.31
SMDT1-203ENST00000484235 RUSC1Q9BVN2 902 aa29.51■■■□□ 2.31
SMDT1-203ENST00000484235 TIPINQ9BVW5 301 aa29.51■■■□□ 2.31
SMDT1-203ENST00000484235 TRAIPQ9BWF2 469 aa29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms