RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 ZNF286BP0CG31 522 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 SMIM10L2AP0DMW4 78 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 SMIM10L2BP0DMW5 78 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 CKBP12277 381 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 SCG2P13521 617 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 ITGB5P18084 799 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 RXRAP19793 462 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 CD33P20138 364 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 RPS6KB1P23443 525 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 HOXC8P31273 242 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 ZNF76P36508 570 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 SREBF1P36956 1147 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 EVCP57679 992 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 SETQ01105 290 aaPredicted RBP7.01□□□□□ -1.29
PTCD3-215ENST00000484203 CTBSQ01459 385 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 SP2Q02086 613 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 PFKFB3Q16875 520 aaPredicted RBP7.01□□□□□ -1.29
PTCD3-215ENST00000484203 ADCK5Q3MIX3 580 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 WWC2Q6AWC2 1192 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 GALNT17Q6IS24 598 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 BTLAQ7Z6A9 289 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 APBB2Q92870 758 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 GLG1Q92896 1179 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 BRF1Q92994 677 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 MXRA8Q9BRK3 442 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 RNF26Q9BY78 433 aaPredicted RBP7.01□□□□□ -1.29
PTCD3-215ENST00000484203 AGXT2Q9BYV1 514 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 ZMYND12Q9H0C1 365 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 TTYH1Q9H313 450 aaPredicted RBP7.01□□□□□ -1.29
PTCD3-215ENST00000484203 JPH1Q9HDC5 661 aaPredicted RBP7.01□□□□□ -1.29
PTCD3-215ENST00000484203 SH3GLB2Q9NR46 395 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 PPP4R2Q9NY27 417 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 SEPT3Q9UH03 358 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 BRPF3Q9ULD4 1205 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 CYP46A1Q9Y6A2 500 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 COL11A1P12107 1806 aaPredicted RBP7.01□□□□□ -1.29
PTCD3-215ENST00000484203 NFASCO94856 1347 aa7.01□□□□□ -1.29
PTCD3-215ENST00000484203 COL6A3P12111 3177 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 SMCHD1A6NHR9 2005 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 NID2Q14112 1375 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 TGFBR3LH3BV60 316 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 STXBP3O00186 592 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 MEIS1O00470 390 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 PRPF3O43395 683 aaKnown RBP7□□□□□ -1.29
PTCD3-215ENST00000484203 AMHP03971 560 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 BMP4P12644 408 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 KCNA2P16389 499 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 IFNAR1P17181 557 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 XBP1P17861 261 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 TCF7P36402 384 aaPredicted RBP7□□□□□ -1.29
PTCD3-215ENST00000484203 THPOP40225 353 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 ANAPC15P60006 121 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 SRSF11Q05519 484 aaKnown RBP7□□□□□ -1.29
PTCD3-215ENST00000484203 PPFIA1Q13136 1202 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 GRIN2CQ14957 1233 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 ANKRD1Q15327 319 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 Q6ZUG5 572 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 RUFY3Q7L099 469 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 PLPPR4Q7Z2D5 763 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 HERC6Q8IVU3 1022 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 PHF6Q8IWS0 365 aaKnown RBP eCLIP7□□□□□ -1.29
PTCD3-215ENST00000484203 REXO1Q8N1G1 1221 aaKnown RBP7□□□□□ -1.29
PTCD3-215ENST00000484203 CMTR1Q8N1G2 835 aaKnown RBP7□□□□□ -1.29
PTCD3-215ENST00000484203 NME8Q8N427 588 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 USP38Q8NB14 1042 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 SEPT8Q92599 483 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 IFT43Q96FT9 208 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 ZNF274Q96GC6 653 aaPredicted RBP7□□□□□ -1.29
PTCD3-215ENST00000484203 RAD9AQ99638 391 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 ANO3Q9BYT9 981 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 RNPEPQ9H4A4 650 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 BRD7Q9NPI1 651 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 KCNH7Q9NS40 1196 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 TBC1D22BQ9NU19 505 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 MARK1Q9P0L2 795 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 SLC9A2Q9UBY0 812 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 SNX14Q9Y5W7 946 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 CNTNAP5Q8WYK1 1306 aa7□□□□□ -1.29
PTCD3-215ENST00000484203 hCG_1642624A0A1W2PR95 340 aa6.99□□□□□ -1.29
PTCD3-215ENST00000484203 M0QZ92 97 aa6.99□□□□□ -1.29
PTCD3-215ENST00000484203 EFSO43281 561 aa6.99□□□□□ -1.29
PTCD3-215ENST00000484203 CYP3A4P08684 503 aa6.99□□□□□ -1.29
PTCD3-215ENST00000484203 POU3F3P20264 500 aaPredicted RBP6.99□□□□□ -1.29
PTCD3-215ENST00000484203 BRD2P25440 801 aaKnown RBP6.99□□□□□ -1.29
PTCD3-215ENST00000484203 ARHGAP4P98171 946 aa6.99□□□□□ -1.29
PTCD3-215ENST00000484203 TYRO3Q06418 890 aa6.99□□□□□ -1.29
PTCD3-215ENST00000484203 SFSWAPQ12872 951 aaKnown RBP6.99□□□□□ -1.29
PTCD3-215ENST00000484203 UBE2SQ16763 222 aa6.99□□□□□ -1.29
PTCD3-215ENST00000484203 AAK1Q2M2I8 961 aa6.99□□□□□ -1.29
PTCD3-215ENST00000484203 TRIM71Q2Q1W2 868 aaKnown RBP6.99□□□□□ -1.29
PTCD3-215ENST00000484203 ODR4Q5SWX8 454 aa6.99□□□□□ -1.29
PTCD3-215ENST00000484203 ZNF618Q5T7W0 954 aa6.99□□□□□ -1.29
PTCD3-215ENST00000484203 UTP14CQ5TAP6 766 aaKnown RBP6.99□□□□□ -1.29
PTCD3-215ENST00000484203 IER5Q5VY09 327 aa6.99□□□□□ -1.29
PTCD3-215ENST00000484203 FAM160B1Q5W0V3 765 aa6.99□□□□□ -1.29
PTCD3-215ENST00000484203 PHLDB3Q6NSJ2 640 aa6.99□□□□□ -1.29
PTCD3-215ENST00000484203 ATXN2LQ8WWM7 1075 aaKnown RBP6.99□□□□□ -1.29
PTCD3-215ENST00000484203 MYLIPQ8WY64 445 aa6.99□□□□□ -1.29
PTCD3-215ENST00000484203 DHX38Q92620 1227 aaKnown RBP6.99□□□□□ -1.29
PTCD3-215ENST00000484203 SAMD11Q96NU1 681 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms