RNA–Protein interactions for RNA: ENST00000483708.1

COMMD2-205, Transcript of COMM domain containing 2, humanhuman

TSL 3

Gene COMMD2, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-205ENST00000483708 GDPD5Q8WTR4 605 aa13.99□□□□□ -0.17
COMMD2-205ENST00000483708 INTS4Q96HW7 963 aaKnown RBP13.99□□□□□ -0.17
COMMD2-205ENST00000483708 ELAC1Q9H777 363 aaKnown RBP13.99□□□□□ -0.17
COMMD2-205ENST00000483708 RC3H2Q9HBD1 1191 aaKnown RBP13.99□□□□□ -0.17
COMMD2-205ENST00000483708 IFT122Q9HBG6 1241 aa13.99□□□□□ -0.17
COMMD2-205ENST00000483708 CHST12Q9NRB3 414 aa13.99□□□□□ -0.17
COMMD2-205ENST00000483708 LMCD1Q9NZU5 365 aa13.99□□□□□ -0.17
COMMD2-205ENST00000483708 DBR1Q9UK59 544 aaKnown RBP13.99□□□□□ -0.17
COMMD2-205ENST00000483708 XIRP2A4UGR9 3374 aa13.99□□□□□ -0.17
COMMD2-205ENST00000483708 LPXNO60711 386 aa13.98□□□□□ -0.17
COMMD2-205ENST00000483708 MUTP22033 750 aa13.98□□□□□ -0.17
COMMD2-205ENST00000483708 ARL2P36404 184 aa13.98□□□□□ -0.17
COMMD2-205ENST00000483708 BMPR1AP36894 532 aa13.98□□□□□ -0.17
COMMD2-205ENST00000483708 GATMP50440 423 aa13.98□□□□□ -0.17
COMMD2-205ENST00000483708 IL17AQ16552 155 aa13.98□□□□□ -0.17
COMMD2-205ENST00000483708 KRT79Q5XKE5 535 aa13.98□□□□□ -0.17
COMMD2-205ENST00000483708 POTEGQ6S5H5 508 aa13.98□□□□□ -0.17
COMMD2-205ENST00000483708 MAEAQ7L5Y9 396 aa13.98□□□□□ -0.17
COMMD2-205ENST00000483708 BRAPQ7Z569 592 aa13.98□□□□□ -0.17
COMMD2-205ENST00000483708 SRGAP1Q7Z6B7 1085 aa13.98□□□□□ -0.17
COMMD2-205ENST00000483708 CMTR2Q8IYT2 770 aaKnown RBP13.98□□□□□ -0.17
COMMD2-205ENST00000483708 IGSF22Q8N9C0 903 aa13.98□□□□□ -0.17
COMMD2-205ENST00000483708 RNF149Q8NC42 400 aa13.98□□□□□ -0.17
COMMD2-205ENST00000483708 SNX21Q969T3 373 aa13.98□□□□□ -0.17
COMMD2-205ENST00000483708 XPNPEP1Q9NQW7 623 aa13.98□□□□□ -0.17
COMMD2-205ENST00000483708 TMEM161AQ9NX61 479 aa13.98□□□□□ -0.17
COMMD2-205ENST00000483708 DACT1Q9NYF0 836 aa13.98□□□□□ -0.17
COMMD2-205ENST00000483708 KAT6AQ92794 2004 aa13.97□□□□□ -0.17
COMMD2-205ENST00000483708 A0A0U1RQF3 1178 aa13.97□□□□□ -0.17
COMMD2-205ENST00000483708 ARHGEF35A5YM69 484 aa13.97□□□□□ -0.17
COMMD2-205ENST00000483708 TBKBP1A7MCY6 615 aa13.97□□□□□ -0.17
COMMD2-205ENST00000483708 H3BNC9 293 aa13.97□□□□□ -0.17
COMMD2-205ENST00000483708 USO1O60763 962 aaKnown RBP13.97□□□□□ -0.17
COMMD2-205ENST00000483708 RB1P06400 928 aa13.97□□□□□ -0.17
COMMD2-205ENST00000483708 SYT1P21579 422 aa13.97□□□□□ -0.17
COMMD2-205ENST00000483708 CTNNB1P35222 781 aa13.97□□□□□ -0.17
COMMD2-205ENST00000483708 ATP2C1P98194 919 aaPredicted RBP13.97□□□□□ -0.17
COMMD2-205ENST00000483708 GPM6BQ13491 265 aa13.97□□□□□ -0.17
COMMD2-205ENST00000483708 TFDP1Q14186 410 aa13.97□□□□□ -0.17
COMMD2-205ENST00000483708 ECM1Q16610 540 aa13.97□□□□□ -0.17
COMMD2-205ENST00000483708 PADI6Q6TGC4 694 aa13.97□□□□□ -0.17
COMMD2-205ENST00000483708 ECHDC2Q86YB7 292 aa13.97□□□□□ -0.17
COMMD2-205ENST00000483708 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.97□□□□□ -0.17
COMMD2-205ENST00000483708 RNF169Q8NCN4 708 aa13.97□□□□□ -0.17
COMMD2-205ENST00000483708 SNX29Q8TEQ0 813 aa13.97□□□□□ -0.17
COMMD2-205ENST00000483708 CLP1Q92989 425 aaKnown RBP13.97□□□□□ -0.17
COMMD2-205ENST00000483708 KIAA1024Q9UPX6 916 aa13.97□□□□□ -0.17
COMMD2-205ENST00000483708 PIN4Q9Y237 131 aaKnown RBP13.97□□□□□ -0.17
COMMD2-205ENST00000483708 RWDD3Q9Y3V2 267 aa13.97□□□□□ -0.17
COMMD2-205ENST00000483708 MRPL42Q9Y6G3 142 aaKnown RBP13.97□□□□□ -0.17
COMMD2-205ENST00000483708 REV3LO60673 3130 aa13.97□□□□□ -0.17
COMMD2-205ENST00000483708 PP2D1A8MPX8 630 aa13.96□□□□□ -0.17
COMMD2-205ENST00000483708 HOXA2O43364 376 aa13.96□□□□□ -0.17
COMMD2-205ENST00000483708 EOMESO95936 686 aa13.96□□□□□ -0.17
COMMD2-205ENST00000483708 FGFR1P11362 822 aa13.96□□□□□ -0.17
COMMD2-205ENST00000483708 CDC25AP30304 524 aa13.96□□□□□ -0.17
COMMD2-205ENST00000483708 PHKA2P46019 1235 aa13.96□□□□□ -0.17
COMMD2-205ENST00000483708 PTENP60484 403 aa13.96□□□□□ -0.17
COMMD2-205ENST00000483708 SKIV2LQ15477 1246 aaKnown RBP13.96□□□□□ -0.17
COMMD2-205ENST00000483708 PTPROQ16827 1216 aa13.96□□□□□ -0.17
COMMD2-205ENST00000483708 SPOUT1Q5T280 376 aaKnown RBP13.96□□□□□ -0.17
COMMD2-205ENST00000483708 TWF2Q6IBS0 349 aaKnown RBP13.96□□□□□ -0.17
COMMD2-205ENST00000483708 MCPH1Q8NEM0 835 aa13.96□□□□□ -0.17
COMMD2-205ENST00000483708 ASAP3Q8TDY4 903 aa13.96□□□□□ -0.17
COMMD2-205ENST00000483708 MINDY3Q9H8M7 445 aa13.96□□□□□ -0.17
COMMD2-205ENST00000483708 DDX19AQ9NUU7 478 aaKnown RBP13.96□□□□□ -0.17
COMMD2-205ENST00000483708 DNM3Q9UQ16 869 aa13.96□□□□□ -0.17
COMMD2-205ENST00000483708 VWA3AA6NCI4 1184 aa13.95□□□□□ -0.18
COMMD2-205ENST00000483708 C5orf67F2Z3F1 127 aa13.95□□□□□ -0.18
COMMD2-205ENST00000483708 LINC00271P0C7V0 271 aa13.95□□□□□ -0.18
COMMD2-205ENST00000483708 SKIP12755 728 aa13.95□□□□□ -0.18
COMMD2-205ENST00000483708 CYP11B2P19099 503 aa13.95□□□□□ -0.18
COMMD2-205ENST00000483708 GLRA2P23416 452 aa13.95□□□□□ -0.18
COMMD2-205ENST00000483708 POU5F1BQ06416 359 aa13.95□□□□□ -0.18
COMMD2-205ENST00000483708 NCBP1Q09161 790 aaKnown RBP13.95□□□□□ -0.18
COMMD2-205ENST00000483708 ZRSR1Q15695 479 aaKnown RBP13.95□□□□□ -0.18
COMMD2-205ENST00000483708 ARL6IP4Q66PJ3 421 aaKnown RBP13.95□□□□□ -0.18
COMMD2-205ENST00000483708 HSCBQ8IWL3 235 aa13.95□□□□□ -0.18
COMMD2-205ENST00000483708 ABI1Q8IZP0 508 aa13.95□□□□□ -0.18
COMMD2-205ENST00000483708 C11orf84Q9BUA3 381 aaPredicted RBP13.95□□□□□ -0.18
COMMD2-205ENST00000483708 PLVAPQ9BX97 442 aa13.95□□□□□ -0.18
COMMD2-205ENST00000483708 TMEM117Q9H0C3 514 aa13.95□□□□□ -0.18
COMMD2-205ENST00000483708 POLR3FQ9H1D9 316 aaPredicted RBP13.95□□□□□ -0.18
COMMD2-205ENST00000483708 BHMT2Q9H2M3 363 aa13.95□□□□□ -0.18
COMMD2-205ENST00000483708 GPRC5CQ9NQ84 441 aa13.95□□□□□ -0.18
COMMD2-205ENST00000483708 TYW1Q9NV66 732 aaKnown RBP13.95□□□□□ -0.18
COMMD2-205ENST00000483708 INO80B-WBP1J3KQ70 363 aa13.94□□□□□ -0.18
COMMD2-205ENST00000483708 BMP15O95972 392 aa13.94□□□□□ -0.18
COMMD2-205ENST00000483708 CAPSQ13938 189 aa13.94□□□□□ -0.18
COMMD2-205ENST00000483708 PCBP1Q15365 356 aaKnown RBP eCLIP13.94□□□□□ -0.18
COMMD2-205ENST00000483708 ZNF598Q86UK7 904 aaKnown RBP13.94□□□□□ -0.18
COMMD2-205ENST00000483708 MRPL38Q96DV4 380 aaKnown RBP13.94□□□□□ -0.18
COMMD2-205ENST00000483708 CASD1Q96PB1 797 aa13.94□□□□□ -0.18
COMMD2-205ENST00000483708 MMTAG2Q9BU76 263 aaKnown RBP13.94□□□□□ -0.18
COMMD2-205ENST00000483708 TRAIPQ9BWF2 469 aa13.94□□□□□ -0.18
COMMD2-205ENST00000483708 PRDM6Q9NQX0 595 aa13.94□□□□□ -0.18
COMMD2-205ENST00000483708 AAASQ9NRG9 546 aa13.94□□□□□ -0.18
COMMD2-205ENST00000483708 AGPAT5Q9NUQ2 364 aa13.94□□□□□ -0.18
COMMD2-205ENST00000483708 SPTBN5Q9NRC6 3674 aaKnown RBP13.94□□□□□ -0.18
COMMD2-205ENST00000483708 LRRIQ4A6NIV6 560 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms