RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 DRC1Q96MC2 740 aa19.75■□□□□ 0.75
CPNE1-224ENST00000483359 KIFC3Q9BVG8 833 aa19.75■□□□□ 0.75
CPNE1-224ENST00000483359 ADAMTS10Q9H324 1103 aa19.75■□□□□ 0.75
CPNE1-224ENST00000483359 LMBRD1Q9NUN5 540 aa19.75■□□□□ 0.75
CPNE1-224ENST00000483359 NBNO60934 754 aa19.74■□□□□ 0.75
CPNE1-224ENST00000483359 TBCAO75347 108 aaKnown RBP19.74■□□□□ 0.75
CPNE1-224ENST00000483359 MXD4Q14582 209 aaPredicted RBP19.74■□□□□ 0.75
CPNE1-224ENST00000483359 KRBA2Q6ZNG9 492 aa19.74■□□□□ 0.75
CPNE1-224ENST00000483359 TMEM199Q8N511 208 aa19.74■□□□□ 0.75
CPNE1-224ENST00000483359 ENGASEQ8NFI3 743 aa19.74■□□□□ 0.75
CPNE1-224ENST00000483359 H0YGN5 161 aa19.74■□□□□ 0.75
CPNE1-224ENST00000483359 FAM13AO94988 1023 aa19.74■□□□□ 0.75
CPNE1-224ENST00000483359 IDEP14735 1019 aa19.74■□□□□ 0.75
CPNE1-224ENST00000483359 PEX3P56589 373 aa19.74■□□□□ 0.75
CPNE1-224ENST00000483359 GPNMBQ14956 572 aa19.74■□□□□ 0.75
CPNE1-224ENST00000483359 FAM26DQ5JW98 314 aa19.74■□□□□ 0.75
CPNE1-224ENST00000483359 PAGE5Q96GU1 130 aa19.74■□□□□ 0.75
CPNE1-224ENST00000483359 LBHD1Q9BQE6 289 aaPredicted RBP19.74■□□□□ 0.75
CPNE1-224ENST00000483359 MAGEF1Q9HAY2 307 aa19.74■□□□□ 0.75
CPNE1-224ENST00000483359 CEP290O15078 2479 aa19.73■□□□□ 0.75
CPNE1-224ENST00000483359 MYH11P35749 1972 aa19.73■□□□□ 0.75
CPNE1-224ENST00000483359 ACRP10323 421 aa19.73■□□□□ 0.75
CPNE1-224ENST00000483359 FGFR4P22455 802 aa19.73■□□□□ 0.75
CPNE1-224ENST00000483359 FBXO47Q5MNV8 452 aa19.73■□□□□ 0.75
CPNE1-224ENST00000483359 IFT74Q96LB3 600 aa19.73■□□□□ 0.75
CPNE1-224ENST00000483359 TIPINQ9BVW5 301 aa19.73■□□□□ 0.75
CPNE1-224ENST00000483359 TRIM9Q9C026 710 aa19.73■□□□□ 0.75
CPNE1-224ENST00000483359 ODF2LQ9ULJ1 636 aa19.73■□□□□ 0.75
CPNE1-224ENST00000483359 CCDC169A6NNP5 214 aa19.72■□□□□ 0.75
CPNE1-224ENST00000483359 CRYBB1P53674 252 aaPredicted RBP19.72■□□□□ 0.75
CPNE1-224ENST00000483359 ASIC1P78348 528 aa19.72■□□□□ 0.75
CPNE1-224ENST00000483359 AMPD3Q01432 767 aa19.72■□□□□ 0.75
CPNE1-224ENST00000483359 FPGSQ05932 587 aa19.72■□□□□ 0.75
CPNE1-224ENST00000483359 DMP1Q13316 513 aaPredicted RBP19.72■□□□□ 0.75
CPNE1-224ENST00000483359 CUL4BQ13620 913 aa19.72■□□□□ 0.75
CPNE1-224ENST00000483359 TFDP1Q14186 410 aa19.72■□□□□ 0.75
CPNE1-224ENST00000483359 LPIN1Q14693 890 aa19.72■□□□□ 0.75
CPNE1-224ENST00000483359 ZNF410Q86VK4 478 aa19.72■□□□□ 0.75
CPNE1-224ENST00000483359 DNAJC19Q96DA6 116 aa19.72■□□□□ 0.75
CPNE1-224ENST00000483359 IFT122Q9HBG6 1241 aa19.72■□□□□ 0.75
CPNE1-224ENST00000483359 DACT1Q9NYF0 836 aa19.72■□□□□ 0.75
CPNE1-224ENST00000483359 USP25Q9UHP3 1055 aa19.72■□□□□ 0.75
CPNE1-224ENST00000483359 PDE4DIPQ5VU43 2346 aa19.72■□□□□ 0.75
CPNE1-224ENST00000483359 ASAP2O43150 1006 aa19.72■□□□□ 0.75
CPNE1-224ENST00000483359 PRR29P0C7W0 189 aa19.72■□□□□ 0.75
CPNE1-224ENST00000483359 CD52P31358 61 aa19.72■□□□□ 0.75
CPNE1-224ENST00000483359 MYCT1Q8N699 235 aa19.72■□□□□ 0.75
CPNE1-224ENST00000483359 GCOM2Q9BZD3 368 aaPredicted RBP19.72■□□□□ 0.75
CPNE1-224ENST00000483359 AGO3Q9H9G7 860 aaKnown RBP19.72■□□□□ 0.75
CPNE1-224ENST00000483359 NOC2LQ9Y3T9 749 aaKnown RBP19.72■□□□□ 0.75
CPNE1-224ENST00000483359 ADGRA3Q8IWK6 1321 aa19.71■□□□□ 0.75
CPNE1-224ENST00000483359 KINO60870 393 aaKnown RBP19.71■□□□□ 0.75
CPNE1-224ENST00000483359 MAGEA10P43363 369 aaPredicted RBP19.71■□□□□ 0.75
CPNE1-224ENST00000483359 ODR4Q5SWX8 454 aa19.71■□□□□ 0.75
CPNE1-224ENST00000483359 IFIH1Q9BYX4 1025 aaKnown RBP19.71■□□□□ 0.75
CPNE1-224ENST00000483359 LRRC27Q9C0I9 530 aa19.71■□□□□ 0.75
CPNE1-224ENST00000483359 MINDY3Q9H8M7 445 aa19.71■□□□□ 0.75
CPNE1-224ENST00000483359 PARVGQ9HBI0 331 aa19.71■□□□□ 0.75
CPNE1-224ENST00000483359 RPS6KA5O75582 802 aa19.7■□□□□ 0.74
CPNE1-224ENST00000483359 PLS3P13797 630 aa19.7■□□□□ 0.74
CPNE1-224ENST00000483359 DARSP14868 501 aaKnown RBP19.7■□□□□ 0.74
CPNE1-224ENST00000483359 EIF4BP23588 611 aaKnown RBP19.7■□□□□ 0.74
CPNE1-224ENST00000483359 NAMPTP43490 491 aa19.7■□□□□ 0.74
CPNE1-224ENST00000483359 PHKA2P46019 1235 aa19.7■□□□□ 0.74
CPNE1-224ENST00000483359 NPTX2P47972 431 aa19.7■□□□□ 0.74
CPNE1-224ENST00000483359 CDC42EP1Q00587 391 aa19.7■□□□□ 0.74
CPNE1-224ENST00000483359 NFX1Q12986 1120 aaKnown RBP19.7■□□□□ 0.74
CPNE1-224ENST00000483359 PPP2R5AQ15172 486 aa19.7■□□□□ 0.74
CPNE1-224ENST00000483359 TSHZ1Q6ZSZ6 1077 aa19.7■□□□□ 0.74
CPNE1-224ENST00000483359 DEPTORQ8TB45 409 aa19.7■□□□□ 0.74
CPNE1-224ENST00000483359 TBC1D7Q9P0N9 293 aa19.7■□□□□ 0.74
CPNE1-224ENST00000483359 LARSQ9P2J5 1176 aaKnown RBP19.7■□□□□ 0.74
CPNE1-224ENST00000483359 TET1Q8NFU7 2136 aa19.7■□□□□ 0.74
CPNE1-224ENST00000483359 INO80B-WBP1J3KQ70 363 aa19.7■□□□□ 0.74
CPNE1-224ENST00000483359 SLC16A4O15374 487 aa19.7■□□□□ 0.74
CPNE1-224ENST00000483359 EPHB4P54760 987 aa19.7■□□□□ 0.74
CPNE1-224ENST00000483359 PAK2Q13177 524 aa19.7■□□□□ 0.74
CPNE1-224ENST00000483359 FAM228AQ86W67 206 aa19.7■□□□□ 0.74
CPNE1-224ENST00000483359 SFR1Q86XK3 245 aa19.7■□□□□ 0.74
CPNE1-224ENST00000483359 ERCC4Q92889 916 aaPredicted RBP19.7■□□□□ 0.74
CPNE1-224ENST00000483359 VWCEQ96DN2 955 aa19.7■□□□□ 0.74
CPNE1-224ENST00000483359 INO80BQ9C086 356 aaPredicted RBP19.7■□□□□ 0.74
CPNE1-224ENST00000483359 KMT5AQ9NQR1 393 aa19.7■□□□□ 0.74
CPNE1-224ENST00000483359 PANK4Q9NVE7 773 aa19.7■□□□□ 0.74
CPNE1-224ENST00000483359 RANBP2P49792 3224 aaKnown RBP19.7■□□□□ 0.74
CPNE1-224ENST00000483359 ZNF131P52739 623 aa19.69■□□□□ 0.74
CPNE1-224ENST00000483359 PTENP60484 403 aa19.69■□□□□ 0.74
CPNE1-224ENST00000483359 PPIGQ13427 754 aaKnown RBP eCLIP19.69■□□□□ 0.745e-12■■□□□ 13.5
CPNE1-224ENST00000483359 DBF4BQ8NFT6 615 aa19.69■□□□□ 0.74
CPNE1-224ENST00000483359 C7orf25Q9BPX7 421 aa19.69■□□□□ 0.74
CPNE1-224ENST00000483359 PADI3Q9ULW8 664 aa19.69■□□□□ 0.74
CPNE1-224ENST00000483359 PARNO95453 639 aaKnown RBP19.68■□□□□ 0.74
CPNE1-224ENST00000483359 MCM4P33991 863 aa19.68■□□□□ 0.74
CPNE1-224ENST00000483359 RFC2P35250 354 aa19.68■□□□□ 0.74
CPNE1-224ENST00000483359 PNOCQ13519 176 aa19.68■□□□□ 0.74
CPNE1-224ENST00000483359 TCTN1Q2MV58 587 aa19.68■□□□□ 0.74
CPNE1-224ENST00000483359 ZBTB8OSQ8IWT0 167 aa19.68■□□□□ 0.74
CPNE1-224ENST00000483359 ZNF710Q8N1W2 664 aa19.68■□□□□ 0.74
CPNE1-224ENST00000483359 HPS3Q969F9 1004 aa19.68■□□□□ 0.74
CPNE1-224ENST00000483359 ST3GAL5Q9UNP4 418 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms