RNA–Protein interactions for RNA: ENST00000482910.1

COL16A1-213, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 676 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-213ENST00000482910 LMCD1Q9NZU5 365 aa16.82■□□□□ 0.28
COL16A1-213ENST00000482910 LRFN2Q9ULH4 789 aa16.82■□□□□ 0.28
COL16A1-213ENST00000482910 RWDD3Q9Y3V2 267 aa16.82■□□□□ 0.28
COL16A1-213ENST00000482910 PCDHB7Q9Y5E2 793 aa16.82■□□□□ 0.28
COL16A1-213ENST00000482910 EPOPA6NHQ4 379 aa16.81■□□□□ 0.28
COL16A1-213ENST00000482910 ARL2P36404 184 aa16.81■□□□□ 0.28
COL16A1-213ENST00000482910 TFDP1Q14186 410 aa16.81■□□□□ 0.28
COL16A1-213ENST00000482910 KRT79Q5XKE5 535 aa16.81■□□□□ 0.28
COL16A1-213ENST00000482910 SNX29Q8TEQ0 813 aa16.81■□□□□ 0.28
COL16A1-213ENST00000482910 NFKBIZQ9BYH8 718 aa16.81■□□□□ 0.28
COL16A1-213ENST00000482910 CERS4Q9HA82 394 aa16.81■□□□□ 0.28
COL16A1-213ENST00000482910 FNDC1Q4ZHG4 1894 aaPredicted RBP16.81■□□□□ 0.28
COL16A1-213ENST00000482910 COL4A4P53420 1690 aaPredicted RBP16.81■□□□□ 0.28
COL16A1-213ENST00000482910 TRANK1O15050 2925 aa16.8■□□□□ 0.28
COL16A1-213ENST00000482910 A0A0U1RQF3 1178 aa16.8■□□□□ 0.28
COL16A1-213ENST00000482910 C5orf67F2Z3F1 127 aa16.8■□□□□ 0.28
COL16A1-213ENST00000482910 DLL1O00548 723 aa16.8■□□□□ 0.28
COL16A1-213ENST00000482910 SLC26A4O43511 780 aa16.8■□□□□ 0.28
COL16A1-213ENST00000482910 GTPBP6O43824 516 aaPredicted RBP16.8■□□□□ 0.28
COL16A1-213ENST00000482910 LPXNO60711 386 aa16.8■□□□□ 0.28
COL16A1-213ENST00000482910 RB1P06400 928 aa16.8■□□□□ 0.28
COL16A1-213ENST00000482910 LINC00271P0C7V0 271 aa16.8■□□□□ 0.28
COL16A1-213ENST00000482910 PHKA2P46019 1235 aa16.8■□□□□ 0.28
COL16A1-213ENST00000482910 PTENP60484 403 aa16.8■□□□□ 0.28
COL16A1-213ENST00000482910 BTG3Q14201 252 aaPredicted RBP16.8■□□□□ 0.28
COL16A1-213ENST00000482910 ECM1Q16610 540 aa16.8■□□□□ 0.28
COL16A1-213ENST00000482910 HYIQ5T013 277 aa16.8■□□□□ 0.28
COL16A1-213ENST00000482910 SPRED2Q7Z698 418 aa16.8■□□□□ 0.28
COL16A1-213ENST00000482910 RNF149Q8NC42 400 aa16.8■□□□□ 0.28
COL16A1-213ENST00000482910 FBXO22Q8NEZ5 403 aa16.8■□□□□ 0.28
COL16A1-213ENST00000482910 RSPH1Q8WYR4 309 aa16.8■□□□□ 0.28
COL16A1-213ENST00000482910 AK8Q96MA6 479 aa16.8■□□□□ 0.28
COL16A1-213ENST00000482910 C17orf80Q9BSJ5 609 aa16.8■□□□□ 0.28
COL16A1-213ENST00000482910 BMP2KQ9NSY1 1161 aaPredicted RBP16.8■□□□□ 0.28
COL16A1-213ENST00000482910 PRRC2BQ5JSZ5 2229 aaKnown RBP16.8■□□□□ 0.28
COL16A1-213ENST00000482910 ARHGEF35A5YM69 484 aa16.79■□□□□ 0.28
COL16A1-213ENST00000482910 HOXA2O43364 376 aa16.79■□□□□ 0.28
COL16A1-213ENST00000482910 USO1O60763 962 aaKnown RBP16.79■□□□□ 0.28
COL16A1-213ENST00000482910 EOMESO95936 686 aa16.79■□□□□ 0.28
COL16A1-213ENST00000482910 SRGAP2CP0DJJ0 459 aa16.79■□□□□ 0.28
COL16A1-213ENST00000482910 SKIP12755 728 aa16.79■□□□□ 0.28
COL16A1-213ENST00000482910 CYP11B2P19099 503 aa16.79■□□□□ 0.28
COL16A1-213ENST00000482910 FGFR4P22455 802 aa16.79■□□□□ 0.28
COL16A1-213ENST00000482910 IGFBP4P22692 258 aa16.79■□□□□ 0.28
COL16A1-213ENST00000482910 RESTQ13127 1097 aa16.79■□□□□ 0.28
COL16A1-213ENST00000482910 GRB10Q13322 594 aa16.79■□□□□ 0.28
COL16A1-213ENST00000482910 EPC2Q52LR7 807 aa16.79■□□□□ 0.28
COL16A1-213ENST00000482910 CATSPER4Q7RTX7 472 aa16.79■□□□□ 0.28
COL16A1-213ENST00000482910 ECHDC2Q86YB7 292 aa16.79■□□□□ 0.28
COL16A1-213ENST00000482910 TMEM192Q8IY95 271 aa16.79■□□□□ 0.28
COL16A1-213ENST00000482910 MMTAG2Q9BU76 263 aaKnown RBP16.79■□□□□ 0.28
COL16A1-213ENST00000482910 ZSCAN16Q9H4T2 348 aaPredicted RBP16.79■□□□□ 0.28
COL16A1-213ENST00000482910 AGPAT5Q9NUQ2 364 aa16.79■□□□□ 0.28
COL16A1-213ENST00000482910 KIAA1024Q9UPX6 916 aa16.79■□□□□ 0.28
COL16A1-213ENST00000482910 MTMR6Q9Y217 621 aa16.79■□□□□ 0.28
COL16A1-213ENST00000482910 MTCH2Q9Y6C9 303 aa16.79■□□□□ 0.28
COL16A1-213ENST00000482910 A0A087WWV3 80 aa16.78■□□□□ 0.28
COL16A1-213ENST00000482910 RFXAPO00287 272 aa16.78■□□□□ 0.28
COL16A1-213ENST00000482910 STX6O43752 255 aa16.78■□□□□ 0.28
COL16A1-213ENST00000482910 CSDE1O75534 798 aaKnown RBP16.78■□□□□ 0.28
COL16A1-213ENST00000482910 EYA4O95677 639 aa16.78■□□□□ 0.28
COL16A1-213ENST00000482910 GLRA2P23416 452 aa16.78■□□□□ 0.28
COL16A1-213ENST00000482910 CAPSQ13938 189 aa16.78■□□□□ 0.28
COL16A1-213ENST00000482910 PADI6Q6TGC4 694 aa16.78■□□□□ 0.28
COL16A1-213ENST00000482910 ASAP3Q8TDY4 903 aa16.78■□□□□ 0.28
COL16A1-213ENST00000482910 PLVAPQ9BX97 442 aa16.78■□□□□ 0.28
COL16A1-213ENST00000482910 NT5C3AQ9H0P0 336 aa16.78■□□□□ 0.28
COL16A1-213ENST00000482910 POLR3FQ9H1D9 316 aaPredicted RBP16.78■□□□□ 0.28
COL16A1-213ENST00000482910 DDX19AQ9NUU7 478 aaKnown RBP16.78■□□□□ 0.28
COL16A1-213ENST00000482910 DNM3Q9UQ16 869 aa16.78■□□□□ 0.28
COL16A1-213ENST00000482910 MORC2Q9Y6X9 1032 aaPredicted RBP16.78■□□□□ 0.28
COL16A1-213ENST00000482910 VWA3AA6NCI4 1184 aa16.77■□□□□ 0.28
COL16A1-213ENST00000482910 PP2D1A8MPX8 630 aa16.77■□□□□ 0.28
COL16A1-213ENST00000482910 H3BNC9 293 aa16.77■□□□□ 0.28
COL16A1-213ENST00000482910 ZNF623O75123 536 aa16.77■□□□□ 0.28
COL16A1-213ENST00000482910 AXLP30530 894 aa16.77■□□□□ 0.28
COL16A1-213ENST00000482910 BMPR1AP36894 532 aa16.77■□□□□ 0.28
COL16A1-213ENST00000482910 RAB27AP51159 221 aa16.77■□□□□ 0.28
COL16A1-213ENST00000482910 SF3A1Q15459 793 aaKnown RBP16.77■□□□□ 0.28
COL16A1-213ENST00000482910 NAALADL2Q58DX5 795 aa16.77■□□□□ 0.28
COL16A1-213ENST00000482910 ZNF598Q86UK7 904 aaKnown RBP16.77■□□□□ 0.28
COL16A1-213ENST00000482910 GDPD5Q8WTR4 605 aa16.77■□□□□ 0.28
COL16A1-213ENST00000482910 TMEM117Q9H0C3 514 aa16.77■□□□□ 0.28
COL16A1-213ENST00000482910 BHMT2Q9H2M3 363 aa16.77■□□□□ 0.28
COL16A1-213ENST00000482910 MINDY3Q9H8M7 445 aa16.77■□□□□ 0.28
COL16A1-213ENST00000482910 MTUS1Q9ULD2 1270 aa16.77■□□□□ 0.28
COL16A1-213ENST00000482910 PIN4Q9Y237 131 aaKnown RBP16.77■□□□□ 0.28
COL16A1-213ENST00000482910 KIAA1671Q9BY89 1806 aa16.76■□□□□ 0.27
COL16A1-213ENST00000482910 CDC25AP30304 524 aa16.76■□□□□ 0.27
COL16A1-213ENST00000482910 LONP1P36776 959 aaKnown RBP16.76■□□□□ 0.27
COL16A1-213ENST00000482910 TWF2Q6IBS0 349 aaKnown RBP16.76■□□□□ 0.27
COL16A1-213ENST00000482910 KIFAP3Q92845 792 aa16.76■□□□□ 0.27
COL16A1-213ENST00000482910 P2RX5Q93086 422 aa16.76■□□□□ 0.27
COL16A1-213ENST00000482910 CCDC51Q96ER9 411 aa16.76■□□□□ 0.27
COL16A1-213ENST00000482910 C11orf84Q9BUA3 381 aaPredicted RBP16.76■□□□□ 0.27
COL16A1-213ENST00000482910 FOXD4L1Q9NU39 408 aa16.76■□□□□ 0.27
COL16A1-213ENST00000482910 RNF19AQ9NV58 838 aa16.76■□□□□ 0.27
COL16A1-213ENST00000482910 DAXXQ9UER7 740 aaPredicted RBP16.76■□□□□ 0.27
COL16A1-213ENST00000482910 MRPL42Q9Y6G3 142 aaKnown RBP16.76■□□□□ 0.27
COL16A1-213ENST00000482910 ERLIN2O94905 339 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms