RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 HOXA7P31268 230 aaPredicted RBP8.65□□□□□ -1.02
SNX13-208ENST00000482558 EIF4A3P38919 411 aaKnown RBP8.65□□□□□ -1.02
SNX13-208ENST00000482558 TOB1P50616 345 aaPredicted RBP8.65□□□□□ -1.02
SNX13-208ENST00000482558 MAPRE1Q15691 268 aaKnown RBP8.65□□□□□ -1.02
SNX13-208ENST00000482558 PKN1Q16512 942 aa8.65□□□□□ -1.02
SNX13-208ENST00000482558 AOPEPQ8N6M6 819 aa8.65□□□□□ -1.02
SNX13-208ENST00000482558 CELF2-AS1Q8N7Q2 184 aa8.65□□□□□ -1.02
SNX13-208ENST00000482558 SPC24Q8NBT2 197 aa8.65□□□□□ -1.02
SNX13-208ENST00000482558 DAGLBQ8NCG7 672 aa8.65□□□□□ -1.02
SNX13-208ENST00000482558 CCDC112Q8NEF3 446 aa8.65□□□□□ -1.02
SNX13-208ENST00000482558 SMARCE1Q969G3 411 aa8.65□□□□□ -1.02
SNX13-208ENST00000482558 PAGR1Q9BTK6 254 aa8.65□□□□□ -1.02
SNX13-208ENST00000482558 SRRTQ9BXP5 876 aaKnown RBP8.65□□□□□ -1.02
SNX13-208ENST00000482558 CD209Q9NNX6 404 aa8.65□□□□□ -1.02
SNX13-208ENST00000482558 CABP5Q9NP86 173 aa8.65□□□□□ -1.02
SNX13-208ENST00000482558 PIM2Q9P1W9 311 aa8.65□□□□□ -1.02
SNX13-208ENST00000482558 PAXBP1Q9Y5B6 917 aa8.65□□□□□ -1.02
SNX13-208ENST00000482558 ECM29Q5VYK3 1845 aa8.65□□□□□ -1.02
SNX13-208ENST00000482558 MYO3BQ8WXR4 1341 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 SHTN1A0MZ66 631 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 CFAP69A5D8W1 941 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 METTL12A8MUP2 240 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 RRP9O43818 475 aaKnown RBP8.64□□□□□ -1.03
SNX13-208ENST00000482558 UFL1O94874 794 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 RASGRP1O95267 797 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 SLFN14P0C7P3 912 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 TSPY3P0CV98 308 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 TSPY8P0CW00 308 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 PTGS1P23219 599 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 GUCY1A2P33402 732 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 STAT3P40763 770 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 GRIA4P48058 902 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 NLRP5P59047 1200 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 TFAP4Q01664 338 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 GRM4Q14833 912 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 POSTNQ15063 836 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 LRRC41Q15345 812 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 CPSF6Q16630 551 aaKnown RBP eCLIP8.64□□□□□ -1.03
SNX13-208ENST00000482558 LRRC8AQ8IWT6 810 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 ABI1Q8IZP0 508 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 STK11IPQ8N1F8 1099 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 C3orf58Q8NDZ4 430 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 MYRIPQ8NFW9 859 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 SVIPQ8NHG7 77 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 GIMAP7Q8NHV1 300 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 NXPE3Q969Y0 559 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 GSDMAQ96QA5 445 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 NT5C1AQ9BXI3 368 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 FAM126AQ9BYI3 521 aaPredicted RBP8.64□□□□□ -1.03
SNX13-208ENST00000482558 KRTAP4-9Q9BYQ8 210 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 COA1Q9GZY4 146 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 RNF208Q9H0X6 261 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 KCNF1Q9H3M0 494 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 CAAP1Q9H8G2 361 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 GJB4Q9NTQ9 266 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 PPM1HQ9ULR3 514 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 KCNJ14Q9UNX9 436 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 CD2APQ9Y5K6 639 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 MYH2Q9UKX2 1941 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 UBR3Q6ZT12 1888 aa8.64□□□□□ -1.03
SNX13-208ENST00000482558 COL4A1P02462 1669 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 GAKO14976 1311 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 BAZ2AQ9UIF9 1905 aaKnown RBP8.63□□□□□ -1.03
SNX13-208ENST00000482558 WDR64B1ANS9 1081 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 ADAM11O75078 769 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 COL6A1P12109 1028 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 PTPRAP18433 802 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 KLRK1P26718 216 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 GNA11P29992 359 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 SOX5P35711 763 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 PDE6BP35913 854 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 LONP1P36776 959 aaKnown RBP8.63□□□□□ -1.03
SNX13-208ENST00000482558 SARSP49591 514 aaKnown RBP8.63□□□□□ -1.03
SNX13-208ENST00000482558 GPSM2P81274 684 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 ATP2C1P98194 919 aaPredicted RBP8.63□□□□□ -1.03
SNX13-208ENST00000482558 NFKB2Q00653 900 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 MCL1Q07820 350 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 DPCR1Q3MIW9 517 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 MTERF2Q49AM1 385 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 TTC38Q5R3I4 469 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 C10orf62Q5T681 223 aaPredicted RBP8.63□□□□□ -1.03
SNX13-208ENST00000482558 PCNX4Q63HM2 1172 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 KRT27Q7Z3Y8 459 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 C14orf80Q86SX3 495 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 CHPFQ8IZ52 775 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 POU5F2Q8N7G0 328 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 IQUBQ8NA54 791 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 SPATA20Q8TB22 786 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 ENOX1Q8TC92 643 aaKnown RBP8.63□□□□□ -1.03
SNX13-208ENST00000482558 ZNF296Q8WUU4 475 aaPredicted RBP8.63□□□□□ -1.03
SNX13-208ENST00000482558 MFSD3Q96ES6 412 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 CTAGE1Q96RT6 745 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 EYA3Q99504 573 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 MRIQ9BWK5 157 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 SPZ1Q9BXG8 430 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 ADAM19Q9H013 955 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 ZHX3Q9H4I2 956 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 MAGEF1Q9HAY2 307 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 ZFYVE1Q9HBF4 777 aa8.63□□□□□ -1.03
SNX13-208ENST00000482558 RMND1Q9NWS8 449 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms