RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 NIPA1Q7RTP0 329 aa11.68□□□□□ -0.54
DDX39B-220ENST00000482195 TMC7Q7Z402 723 aa11.68□□□□□ -0.54
DDX39B-220ENST00000482195 LRRC71Q8N4P6 559 aa11.68□□□□□ -0.54
DDX39B-220ENST00000482195 TMEM87AQ8NBN3 555 aa11.68□□□□□ -0.54
DDX39B-220ENST00000482195 BARHL2Q9NY43 387 aa11.68□□□□□ -0.54
DDX39B-220ENST00000482195 GABBR1Q9UBS5 961 aa11.68□□□□□ -0.54
DDX39B-220ENST00000482195 CDH22Q9UJ99 828 aa11.68□□□□□ -0.54
DDX39B-220ENST00000482195 LZTS1Q9Y250 596 aa11.68□□□□□ -0.54
DDX39B-220ENST00000482195 NR2E1Q9Y466 385 aa11.68□□□□□ -0.54
DDX39B-220ENST00000482195 PLXNA3P51805 1871 aa11.68□□□□□ -0.54
DDX39B-220ENST00000482195 KLF18A0A0U1RQI7 1052 aa11.67□□□□□ -0.54
DDX39B-220ENST00000482195 ZBTB42B2RXF5 422 aa11.67□□□□□ -0.54
DDX39B-220ENST00000482195 ST18O60284 1047 aa11.67□□□□□ -0.54
DDX39B-220ENST00000482195 GPR32O75388 356 aa11.67□□□□□ -0.54
DDX39B-220ENST00000482195 PDGFBP01127 241 aaPredicted RBP11.67□□□□□ -0.54
DDX39B-220ENST00000482195 NLRP11P59045 1033 aaKnown RBP11.67□□□□□ -0.54
DDX39B-220ENST00000482195 KCNT2Q6UVM3 1135 aa11.67□□□□□ -0.54
DDX39B-220ENST00000482195 CASP10Q92851 521 aa11.67□□□□□ -0.54
DDX39B-220ENST00000482195 ASIC4Q96FT7 647 aa11.67□□□□□ -0.54
DDX39B-220ENST00000482195 CASD1Q96PB1 797 aa11.67□□□□□ -0.54
DDX39B-220ENST00000482195 ELAC1Q9H777 363 aaKnown RBP11.67□□□□□ -0.54
DDX39B-220ENST00000482195 NGRNQ9NPE2 291 aaKnown RBP11.67□□□□□ -0.54
DDX39B-220ENST00000482195 BRPF3Q9ULD4 1205 aa11.67□□□□□ -0.54
DDX39B-220ENST00000482195 CEP131Q9UPN4 1083 aa11.67□□□□□ -0.54
DDX39B-220ENST00000482195 ZFHX2Q9C0A1 2572 aaPredicted RBP11.66□□□□□ -0.54
DDX39B-220ENST00000482195 CHMP2AO43633 222 aa11.66□□□□□ -0.54
DDX39B-220ENST00000482195 ATP4AP20648 1035 aa11.66□□□□□ -0.54
DDX39B-220ENST00000482195 FGFR4P22455 802 aa11.66□□□□□ -0.54
DDX39B-220ENST00000482195 TMOD1P28289 359 aa11.66□□□□□ -0.54
DDX39B-220ENST00000482195 AVPR2P30518 371 aa11.66□□□□□ -0.54
DDX39B-220ENST00000482195 CLK2P49760 499 aaKnown RBP11.66□□□□□ -0.54
DDX39B-220ENST00000482195 METAP2P50579 478 aaKnown RBP eCLIP11.66□□□□□ -0.54
DDX39B-220ENST00000482195 PLCB3Q01970 1234 aa11.66□□□□□ -0.54
DDX39B-220ENST00000482195 MTMR3Q13615 1198 aa11.66□□□□□ -0.54
DDX39B-220ENST00000482195 DSC3Q14574 896 aa11.66□□□□□ -0.54
DDX39B-220ENST00000482195 SMC1AQ14683 1233 aaKnown RBP11.66□□□□□ -0.54
DDX39B-220ENST00000482195 NECTIN1Q15223 517 aa11.66□□□□□ -0.54
DDX39B-220ENST00000482195 PRR16Q569H4 304 aa11.66□□□□□ -0.54
DDX39B-220ENST00000482195 CES5AQ6NT32 575 aa11.66□□□□□ -0.54
DDX39B-220ENST00000482195 ZNF746Q6NUN9 644 aaPredicted RBP11.66□□□□□ -0.54
DDX39B-220ENST00000482195 EFCAB12Q6NXP0 572 aa11.66□□□□□ -0.54
DDX39B-220ENST00000482195 SYCE2Q6PIF2 218 aa11.66□□□□□ -0.54
DDX39B-220ENST00000482195 SMAP1Q8IYB5 467 aaPredicted RBP11.66□□□□□ -0.54
DDX39B-220ENST00000482195 REXO1Q8N1G1 1221 aaKnown RBP11.66□□□□□ -0.54
DDX39B-220ENST00000482195 KREMEN2Q8NCW0 462 aa11.66□□□□□ -0.54
DDX39B-220ENST00000482195 HELQQ8TDG4 1101 aa11.66□□□□□ -0.54
DDX39B-220ENST00000482195 FAM167AQ96KS9 214 aa11.66□□□□□ -0.54
DDX39B-220ENST00000482195 S1PR5Q9H228 398 aa11.66□□□□□ -0.54
DDX39B-220ENST00000482195 TBC1D22BQ9NU19 505 aa11.66□□□□□ -0.54
DDX39B-220ENST00000482195 SPG21Q9NZD8 308 aa11.66□□□□□ -0.54
DDX39B-220ENST00000482195 PCDHA10Q9Y5I2 948 aa11.66□□□□□ -0.54
DDX39B-220ENST00000482195 DENND4AQ7Z401 1863 aa11.66□□□□□ -0.54
DDX39B-220ENST00000482195 MYO15AQ9UKN7 3530 aa11.65□□□□□ -0.54
DDX39B-220ENST00000482195 IGLV3-22A0A075B6J6 115 aa11.65□□□□□ -0.54
DDX39B-220ENST00000482195 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.65□□□□□ -0.54
DDX39B-220ENST00000482195 C2CD4DB7Z1M9 353 aa11.65□□□□□ -0.54
DDX39B-220ENST00000482195 H0Y858 1186 aa11.65□□□□□ -0.54
DDX39B-220ENST00000482195 MAGEB2O15479 319 aa11.65□□□□□ -0.54
DDX39B-220ENST00000482195 DHX15O43143 795 aaKnown RBP11.65□□□□□ -0.54
DDX39B-220ENST00000482195 WEE2P0C1S8 567 aa11.65□□□□□ -0.54
DDX39B-220ENST00000482195 HOXB8P17481 243 aaPredicted RBP11.65□□□□□ -0.54
DDX39B-220ENST00000482195 CDC27P30260 824 aa11.65□□□□□ -0.54
DDX39B-220ENST00000482195 PRKCEQ02156 737 aa11.65□□□□□ -0.54
DDX39B-220ENST00000482195 FUT2Q10981 343 aa11.65□□□□□ -0.54
DDX39B-220ENST00000482195 BMS1Q14692 1282 aaKnown RBP11.65□□□□□ -0.54
DDX39B-220ENST00000482195 RARS2Q5T160 578 aaKnown RBP11.65□□□□□ -0.54
DDX39B-220ENST00000482195 LRRC55Q6ZSA7 311 aa11.65□□□□□ -0.54
DDX39B-220ENST00000482195 FAM43BQ6ZT52 329 aaPredicted RBP11.65□□□□□ -0.54
DDX39B-220ENST00000482195 ECHDC2Q86YB7 292 aa11.65□□□□□ -0.54
DDX39B-220ENST00000482195 TEX2Q8IWB9 1127 aa11.65□□□□□ -0.54
DDX39B-220ENST00000482195 RASGRP4Q8TDF6 673 aa11.65□□□□□ -0.54
DDX39B-220ENST00000482195 CCDC12Q8WUD4 166 aaPredicted RBP11.65□□□□□ -0.54
DDX39B-220ENST00000482195 TMEM169Q96HH4 297 aa11.65□□□□□ -0.54
DDX39B-220ENST00000482195 IRF2BPLQ9H1B7 796 aa11.65□□□□□ -0.54
DDX39B-220ENST00000482195 POMKQ9H5K3 350 aa11.65□□□□□ -0.54
DDX39B-220ENST00000482195 C6orf50Q9HD87 102 aa11.65□□□□□ -0.54
DDX39B-220ENST00000482195 RNF19AQ9NV58 838 aa11.65□□□□□ -0.54
DDX39B-220ENST00000482195 MAFBQ9Y5Q3 323 aaPredicted RBP11.65□□□□□ -0.54
DDX39B-220ENST00000482195 C2orf16Q68DN1 1984 aa11.65□□□□□ -0.55
DDX39B-220ENST00000482195 PTPRZ1P23471 2315 aaPredicted RBP11.64□□□□□ -0.55
DDX39B-220ENST00000482195 C2orf71A6NGG8 1288 aa11.64□□□□□ -0.55
DDX39B-220ENST00000482195 WDR64B1ANS9 1081 aa11.64□□□□□ -0.55
DDX39B-220ENST00000482195 NT5C1B-RDH14C9J2C7 533 aa11.64□□□□□ -0.55
DDX39B-220ENST00000482195 ZC3H11AO75152 810 aaKnown RBP eCLIP11.64□□□□□ -0.55
DDX39B-220ENST00000482195 FAM189BP81408 668 aa11.64□□□□□ -0.55
DDX39B-220ENST00000482195 PFKFB3Q16875 520 aaPredicted RBP11.64□□□□□ -0.55
DDX39B-220ENST00000482195 LONRF3Q496Y0 759 aa11.64□□□□□ -0.55
DDX39B-220ENST00000482195 CLLU1OSQ5K130 101 aa11.64□□□□□ -0.55
DDX39B-220ENST00000482195 TMEM184AQ6ZMB5 413 aa11.64□□□□□ -0.55
DDX39B-220ENST00000482195 DHX32Q7L7V1 743 aaKnown RBP11.64□□□□□ -0.55
DDX39B-220ENST00000482195 TDRD5Q8NAT2 981 aaKnown RBP11.64□□□□□ -0.55
DDX39B-220ENST00000482195 SNX27Q96L92 541 aa11.64□□□□□ -0.55
DDX39B-220ENST00000482195 RIPOR3Q96MK2 946 aa11.64□□□□□ -0.55
DDX39B-220ENST00000482195 NECTIN4Q96NY8 510 aa11.64□□□□□ -0.55
DDX39B-220ENST00000482195 MRPL9Q9BYD2 267 aaKnown RBP11.64□□□□□ -0.55
DDX39B-220ENST00000482195 MFSD1Q9H3U5 465 aa11.64□□□□□ -0.55
DDX39B-220ENST00000482195 LHX6Q9UPM6 363 aa11.64□□□□□ -0.55
DDX39B-220ENST00000482195 SORCS3Q9UPU3 1222 aa11.64□□□□□ -0.55
DDX39B-220ENST00000482195 HCFC2Q9Y5Z7 792 aa11.64□□□□□ -0.55
DDX39B-220ENST00000482195 CFAP54Q96N23 3096 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms