RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 SLC44A3Q8N4M1 653 aa16.96■□□□□ 0.31
HDAC6-224ENST00000481929 SUMF1Q8NBK3 374 aa16.96■□□□□ 0.31
HDAC6-224ENST00000481929 BCL7CQ8WUZ0 217 aaPredicted RBP16.96■□□□□ 0.31
HDAC6-224ENST00000481929 NXPE3Q969Y0 559 aa16.96■□□□□ 0.31
HDAC6-224ENST00000481929 PGBD1Q96JS3 809 aa16.96■□□□□ 0.31
HDAC6-224ENST00000481929 SCLT1Q96NL6 688 aa16.96■□□□□ 0.31
HDAC6-224ENST00000481929 DLGAP2Q9P1A6 1054 aa16.96■□□□□ 0.31
HDAC6-224ENST00000481929 NCDNQ9UBB6 729 aa16.96■□□□□ 0.31
HDAC6-224ENST00000481929 MAP1BP46821 2468 aaKnown RBP16.96■□□□□ 0.31
HDAC6-224ENST00000481929 FOSP01100 380 aaPredicted RBP16.95■□□□□ 0.3
HDAC6-224ENST00000481929 DARSP14868 501 aaKnown RBP16.95■□□□□ 0.3
HDAC6-224ENST00000481929 ZNF76P36508 570 aa16.95■□□□□ 0.3
HDAC6-224ENST00000481929 EFCAB12Q6NXP0 572 aa16.95■□□□□ 0.3
HDAC6-224ENST00000481929 NFXL1Q6ZNB6 911 aa16.95■□□□□ 0.3
HDAC6-224ENST00000481929 CHD1LQ86WJ1 897 aa16.95■□□□□ 0.3
HDAC6-224ENST00000481929 GPR152Q8TDT2 470 aa16.95■□□□□ 0.3
HDAC6-224ENST00000481929 ZNF668Q96K58 619 aaPredicted RBP16.95■□□□□ 0.3
HDAC6-224ENST00000481929 KLHL5Q96PQ7 755 aa16.95■□□□□ 0.3
HDAC6-224ENST00000481929 ANO3Q9BYT9 981 aa16.95■□□□□ 0.3
HDAC6-224ENST00000481929 ARHGEF3Q9NR81 526 aa16.95■□□□□ 0.3
HDAC6-224ENST00000481929 EPS15L1Q9UBC2 864 aa16.95■□□□□ 0.3
HDAC6-224ENST00000481929 STK39Q9UEW8 545 aa16.95■□□□□ 0.3
HDAC6-224ENST00000481929 TAF6LQ9Y6J9 622 aa16.95■□□□□ 0.3
HDAC6-224ENST00000481929 CACNA1IQ9P0X4 2223 aa16.94■□□□□ 0.3
HDAC6-224ENST00000481929 GALTP07902 379 aa16.94■□□□□ 0.3
HDAC6-224ENST00000481929 FGFR4P22455 802 aa16.94■□□□□ 0.3
HDAC6-224ENST00000481929 RNASELQ05823 741 aaKnown RBP16.94■□□□□ 0.3
HDAC6-224ENST00000481929 ST3GAL2Q16842 350 aa16.94■□□□□ 0.3
HDAC6-224ENST00000481929 KIAA0319Q5VV43 1072 aa16.94■□□□□ 0.3
HDAC6-224ENST00000481929 CASC1Q6TDU7 716 aa16.94■□□□□ 0.3
HDAC6-224ENST00000481929 GLB1LQ6UWU2 654 aa16.94■□□□□ 0.3
HDAC6-224ENST00000481929 NIPA1Q7RTP0 329 aa16.94■□□□□ 0.3
HDAC6-224ENST00000481929 MB21D2Q8IYB1 491 aaPredicted RBP16.94■□□□□ 0.3
HDAC6-224ENST00000481929 LRRC71Q8N4P6 559 aa16.94■□□□□ 0.3
HDAC6-224ENST00000481929 CCDC82Q8N4S0 544 aa16.94■□□□□ 0.3
HDAC6-224ENST00000481929 GPR161Q8N6U8 529 aaKnown RBP16.94■□□□□ 0.3
HDAC6-224ENST00000481929 LINC01465Q8N7H1 131 aa16.94■□□□□ 0.3
HDAC6-224ENST00000481929 CMASQ8NFW8 434 aaPredicted RBP16.94■□□□□ 0.3
HDAC6-224ENST00000481929 NRDE2Q9H7Z3 1164 aa16.94■□□□□ 0.3
HDAC6-224ENST00000481929 TCEAL9Q9UHQ7 104 aa16.94■□□□□ 0.3
HDAC6-224ENST00000481929 MAFBQ9Y5Q3 323 aaPredicted RBP16.94■□□□□ 0.3
HDAC6-224ENST00000481929 CLUHO75153 1309 aa16.94■□□□□ 0.3
HDAC6-224ENST00000481929 CHD8Q9HCK8 2581 aa16.93■□□□□ 0.3
HDAC6-224ENST00000481929 CCDC69A6NI79 296 aa16.93■□□□□ 0.3
HDAC6-224ENST00000481929 SSBP05455 408 aaKnown RBP eCLIP16.93■□□□□ 0.3
HDAC6-224ENST00000481929 CNPP09543 421 aaKnown RBP16.93■□□□□ 0.3
HDAC6-224ENST00000481929 CALM1P0DP23 149 aa16.93■□□□□ 0.3
HDAC6-224ENST00000481929 CALM2P0DP24 149 aa16.93■□□□□ 0.3
HDAC6-224ENST00000481929 CALM3P0DP25 149 aa16.93■□□□□ 0.3
HDAC6-224ENST00000481929 RXRAP19793 462 aa16.93■□□□□ 0.3
HDAC6-224ENST00000481929 SREBF1P36956 1147 aa16.93■□□□□ 0.3
HDAC6-224ENST00000481929 GPC3P51654 580 aa16.93■□□□□ 0.3
HDAC6-224ENST00000481929 ATXN1P54253 815 aaKnown RBP16.93■□□□□ 0.3
HDAC6-224ENST00000481929 NAPAP54920 295 aa16.93■□□□□ 0.3
HDAC6-224ENST00000481929 NOMO2Q5JPE7 1267 aa16.93■□□□□ 0.3
HDAC6-224ENST00000481929 VARS2Q5ST30 1063 aaKnown RBP16.93■□□□□ 0.3
HDAC6-224ENST00000481929 ELMSAN1Q6PJG2 1045 aa16.93■□□□□ 0.3
HDAC6-224ENST00000481929 CYP26C1Q6V0L0 522 aa16.93■□□□□ 0.3
HDAC6-224ENST00000481929 PLA2G4DQ86XP0 818 aa16.93■□□□□ 0.3
HDAC6-224ENST00000481929 TEX2Q8IWB9 1127 aa16.93■□□□□ 0.3
HDAC6-224ENST00000481929 SMC5Q8IY18 1101 aa16.93■□□□□ 0.3
HDAC6-224ENST00000481929 FAM167AQ96KS9 214 aa16.93■□□□□ 0.3
HDAC6-224ENST00000481929 VN1R3Q9BXE9 311 aa16.93■□□□□ 0.3
HDAC6-224ENST00000481929 GBP3Q9H0R5 595 aa16.93■□□□□ 0.3
HDAC6-224ENST00000481929 WDR6Q9NNW5 1121 aaKnown RBP16.93■□□□□ 0.3
HDAC6-224ENST00000481929 RIC8AQ9NPQ8 531 aa16.93■□□□□ 0.3
HDAC6-224ENST00000481929 MAN1C1Q9NR34 630 aa16.93■□□□□ 0.3
HDAC6-224ENST00000481929 TBC1D13Q9NVG8 400 aa16.93■□□□□ 0.3
HDAC6-224ENST00000481929 INPP5FQ9Y2H2 1132 aa16.93■□□□□ 0.3
HDAC6-224ENST00000481929 MYH9P35579 1960 aaKnown RBP16.92■□□□□ 0.3
HDAC6-224ENST00000481929 POTEMA6NI47 508 aa16.92■□□□□ 0.3
HDAC6-224ENST00000481929 IPO5O00410 1097 aaKnown RBP16.92■□□□□ 0.3
HDAC6-224ENST00000481929 SPTLC1O15269 473 aa16.92■□□□□ 0.3
HDAC6-224ENST00000481929 DHX15O43143 795 aaKnown RBP16.92■□□□□ 0.3
HDAC6-224ENST00000481929 PHKA2P46019 1235 aa16.92■□□□□ 0.3
HDAC6-224ENST00000481929 SLC11A1P49279 550 aa16.92■□□□□ 0.3
HDAC6-224ENST00000481929 PTH1RQ03431 593 aa16.92■□□□□ 0.3
HDAC6-224ENST00000481929 DCLRE1AQ6PJP8 1040 aa16.92■□□□□ 0.3
HDAC6-224ENST00000481929 POTEGQ6S5H5 508 aa16.92■□□□□ 0.3
HDAC6-224ENST00000481929 TMTC2Q8N394 836 aa16.92■□□□□ 0.3
HDAC6-224ENST00000481929 PJA1Q8NG27 643 aa16.92■□□□□ 0.3
HDAC6-224ENST00000481929 NLRP7Q8WX94 980 aa16.92■□□□□ 0.3
HDAC6-224ENST00000481929 LPPQ93052 612 aa16.92■□□□□ 0.3
HDAC6-224ENST00000481929 BORCS6Q96GS4 357 aa16.92■□□□□ 0.3
HDAC6-224ENST00000481929 MYADMQ96S97 322 aa16.92■□□□□ 0.3
HDAC6-224ENST00000481929 MTA3Q9BTC8 594 aa16.92■□□□□ 0.3
HDAC6-224ENST00000481929 CHST12Q9NRB3 414 aa16.92■□□□□ 0.3
HDAC6-224ENST00000481929 MRPL17Q9NRX2 175 aaKnown RBP16.92■□□□□ 0.3
HDAC6-224ENST00000481929 DNAJB4Q9UDY4 337 aa16.92■□□□□ 0.3
HDAC6-224ENST00000481929 DPP7Q9UHL4 492 aa16.92■□□□□ 0.3
HDAC6-224ENST00000481929 CDV3Q9UKY7 258 aaKnown RBP16.92■□□□□ 0.3
HDAC6-224ENST00000481929 CHD6Q8TD26 2715 aa16.91■□□□□ 0.3
HDAC6-224ENST00000481929 CCDC195A0A1B0GUA6 201 aa16.91■□□□□ 0.3
HDAC6-224ENST00000481929 PRR5-ARHGAP8B1AHC4 643 aa16.91■□□□□ 0.3
HDAC6-224ENST00000481929 PSAPP07602 524 aa16.91■□□□□ 0.3
HDAC6-224ENST00000481929 SKIP12755 728 aa16.91■□□□□ 0.3
HDAC6-224ENST00000481929 ADCY7P51828 1080 aa16.91■□□□□ 0.3
HDAC6-224ENST00000481929 ARHGAP8P85298 464 aa16.91■□□□□ 0.3
HDAC6-224ENST00000481929 AP3B2Q13367 1082 aa16.91■□□□□ 0.3
HDAC6-224ENST00000481929 ZNF528Q3MIS6 628 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms