RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 RAB34Q9BZG1 259 aa20.86■□□□□ 0.93
HSPG2-210ENST00000481644 ELAC1Q9H777 363 aaKnown RBP20.86■□□□□ 0.93
HSPG2-210ENST00000481644 IFT122Q9HBG6 1241 aa20.86■□□□□ 0.93
HSPG2-210ENST00000481644 XPNPEP1Q9NQW7 623 aa20.86■□□□□ 0.93
HSPG2-210ENST00000481644 TMEM161AQ9NX61 479 aa20.86■□□□□ 0.93
HSPG2-210ENST00000481644 LMCD1Q9NZU5 365 aa20.86■□□□□ 0.93
HSPG2-210ENST00000481644 LRWD1Q9UFC0 647 aa20.86■□□□□ 0.93
HSPG2-210ENST00000481644 MRPL42Q9Y6G3 142 aaKnown RBP20.86■□□□□ 0.93
HSPG2-210ENST00000481644 H3BNC9 293 aa20.85■□□□□ 0.93
HSPG2-210ENST00000481644 LINC00271P0C7V0 271 aa20.85■□□□□ 0.93
HSPG2-210ENST00000481644 GPM6BQ13491 265 aa20.85■□□□□ 0.93
HSPG2-210ENST00000481644 CATSPER4Q7RTX7 472 aa20.85■□□□□ 0.93
HSPG2-210ENST00000481644 DACT1Q9NYF0 836 aa20.85■□□□□ 0.93
HSPG2-210ENST00000481644 DBR1Q9UK59 544 aaKnown RBP20.85■□□□□ 0.93
HSPG2-210ENST00000481644 USO1O60763 962 aaKnown RBP20.84■□□□□ 0.93
HSPG2-210ENST00000481644 BMPR1AP36894 532 aa20.84■□□□□ 0.93
HSPG2-210ENST00000481644 CCT6AP40227 531 aaKnown RBP20.84■□□□□ 0.93
HSPG2-210ENST00000481644 PRPHP41219 470 aa20.84■□□□□ 0.93
HSPG2-210ENST00000481644 PDIA5Q14554 519 aa20.84■□□□□ 0.93
HSPG2-210ENST00000481644 MXD4Q14582 209 aaPredicted RBP20.84■□□□□ 0.93
HSPG2-210ENST00000481644 SKIV2LQ15477 1246 aaKnown RBP20.84■□□□□ 0.93
HSPG2-210ENST00000481644 FAM102BQ5T8I3 360 aa20.84■□□□□ 0.93
HSPG2-210ENST00000481644 SRGAP1Q7Z6B7 1085 aa20.84■□□□□ 0.93
HSPG2-210ENST00000481644 ECHDC2Q86YB7 292 aa20.84■□□□□ 0.93
HSPG2-210ENST00000481644 IGSF22Q8N9C0 903 aa20.84■□□□□ 0.93
HSPG2-210ENST00000481644 RNF149Q8NC42 400 aa20.84■□□□□ 0.93
HSPG2-210ENST00000481644 PRDM6Q9NQX0 595 aa20.84■□□□□ 0.93
HSPG2-210ENST00000481644 CHST12Q9NRB3 414 aa20.84■□□□□ 0.93
HSPG2-210ENST00000481644 PIN4Q9Y237 131 aaKnown RBP20.84■□□□□ 0.93
HSPG2-210ENST00000481644 STK24Q9Y6E0 443 aa20.84■□□□□ 0.93
HSPG2-210ENST00000481644 TRANK1O15050 2925 aa20.84■□□□□ 0.93
HSPG2-210ENST00000481644 VPS37CA5D8V6 355 aaPredicted RBP20.83■□□□□ 0.93
HSPG2-210ENST00000481644 TBKBP1A7MCY6 615 aa20.83■□□□□ 0.93
HSPG2-210ENST00000481644 C5orf67F2Z3F1 127 aa20.83■□□□□ 0.93
HSPG2-210ENST00000481644 K7ELQ4 463 aaPredicted RBP20.83■□□□□ 0.93
HSPG2-210ENST00000481644 RB1P06400 928 aa20.83■□□□□ 0.93
HSPG2-210ENST00000481644 FGFR1P11362 822 aa20.83■□□□□ 0.93
HSPG2-210ENST00000481644 PDCP20941 246 aa20.83■□□□□ 0.93
HSPG2-210ENST00000481644 MUTP22033 750 aa20.83■□□□□ 0.93
HSPG2-210ENST00000481644 PHKA2P46019 1235 aa20.83■□□□□ 0.93
HSPG2-210ENST00000481644 PTPROQ16827 1216 aa20.83■□□□□ 0.93
HSPG2-210ENST00000481644 DTHD1Q6ZMT9 781 aa20.83■□□□□ 0.93
HSPG2-210ENST00000481644 C11orf84Q9BUA3 381 aaPredicted RBP20.83■□□□□ 0.93
HSPG2-210ENST00000481644 A0A0U1RQF3 1178 aa20.82■□□□□ 0.92
HSPG2-210ENST00000481644 HOXA2O43364 376 aa20.82■□□□□ 0.92
HSPG2-210ENST00000481644 ATP2C1P98194 919 aaPredicted RBP20.82■□□□□ 0.92
HSPG2-210ENST00000481644 TFDP1Q14186 410 aa20.82■□□□□ 0.92
HSPG2-210ENST00000481644 TWF2Q6IBS0 349 aaKnown RBP20.82■□□□□ 0.92
HSPG2-210ENST00000481644 BRAPQ7Z569 592 aa20.82■□□□□ 0.92
HSPG2-210ENST00000481644 RNF169Q8NCN4 708 aa20.82■□□□□ 0.92
HSPG2-210ENST00000481644 SNX29Q8TEQ0 813 aa20.82■□□□□ 0.92
HSPG2-210ENST00000481644 MRPL38Q96DV4 380 aaKnown RBP20.82■□□□□ 0.92
HSPG2-210ENST00000481644 INTS4Q96HW7 963 aaKnown RBP20.82■□□□□ 0.92
HSPG2-210ENST00000481644 POLR3FQ9H1D9 316 aaPredicted RBP20.82■□□□□ 0.92
HSPG2-210ENST00000481644 MINDY3Q9H8M7 445 aa20.82■□□□□ 0.92
HSPG2-210ENST00000481644 THEGQ9P2T0 379 aa20.82■□□□□ 0.92
HSPG2-210ENST00000481644 PRUNE2Q8WUY3 3088 aa20.82■□□□□ 0.92
HSPG2-210ENST00000481644 ARHGEF35A5YM69 484 aa20.81■□□□□ 0.92
HSPG2-210ENST00000481644 ARL2P36404 184 aa20.81■□□□□ 0.92
HSPG2-210ENST00000481644 IL17AQ16552 155 aa20.81■□□□□ 0.92
HSPG2-210ENST00000481644 SPOUT1Q5T280 376 aaKnown RBP20.81■□□□□ 0.92
HSPG2-210ENST00000481644 MAEAQ7L5Y9 396 aa20.81■□□□□ 0.92
HSPG2-210ENST00000481644 ABI1Q8IZP0 508 aa20.81■□□□□ 0.92
HSPG2-210ENST00000481644 MCPH1Q8NEM0 835 aa20.81■□□□□ 0.92
HSPG2-210ENST00000481644 ASAP3Q8TDY4 903 aa20.81■□□□□ 0.92
HSPG2-210ENST00000481644 PLVAPQ9BX97 442 aa20.81■□□□□ 0.92
HSPG2-210ENST00000481644 AGPAT5Q9NUQ2 364 aa20.81■□□□□ 0.92
HSPG2-210ENST00000481644 PP2D1A8MPX8 630 aa20.8■□□□□ 0.92
HSPG2-210ENST00000481644 EOMESO95936 686 aa20.8■□□□□ 0.92
HSPG2-210ENST00000481644 GLRA2P23416 452 aa20.8■□□□□ 0.92
HSPG2-210ENST00000481644 PTENP60484 403 aa20.8■□□□□ 0.92
HSPG2-210ENST00000481644 CAPSQ13938 189 aa20.8■□□□□ 0.92
HSPG2-210ENST00000481644 ECM1Q16610 540 aa20.8■□□□□ 0.92
HSPG2-210ENST00000481644 KRT79Q5XKE5 535 aa20.8■□□□□ 0.92
HSPG2-210ENST00000481644 PADI6Q6TGC4 694 aa20.8■□□□□ 0.92
HSPG2-210ENST00000481644 TRAIPQ9BWF2 469 aa20.8■□□□□ 0.92
HSPG2-210ENST00000481644 TMEM117Q9H0C3 514 aa20.8■□□□□ 0.92
HSPG2-210ENST00000481644 FOXD4L1Q9NU39 408 aa20.8■□□□□ 0.92
HSPG2-210ENST00000481644 DDX19AQ9NUU7 478 aaKnown RBP20.8■□□□□ 0.92
HSPG2-210ENST00000481644 RNF19AQ9NV58 838 aa20.8■□□□□ 0.92
HSPG2-210ENST00000481644 KIAA1024Q9UPX6 916 aa20.8■□□□□ 0.92
HSPG2-210ENST00000481644 UNC80Q8N2C7 3258 aa20.79■□□□□ 0.92
HSPG2-210ENST00000481644 ATG2AQ2TAZ0 1938 aa20.79■□□□□ 0.92
HSPG2-210ENST00000481644 ERLIN2O94905 339 aa20.79■□□□□ 0.92
HSPG2-210ENST00000481644 SKIP12755 728 aa20.79■□□□□ 0.92
HSPG2-210ENST00000481644 ATF7P17544 494 aaPredicted RBP20.79■□□□□ 0.92
HSPG2-210ENST00000481644 POU5F1BQ06416 359 aa20.79■□□□□ 0.92
HSPG2-210ENST00000481644 ZNF598Q86UK7 904 aaKnown RBP20.79■□□□□ 0.92
HSPG2-210ENST00000481644 P2RX5Q93086 422 aa20.79■□□□□ 0.92
HSPG2-210ENST00000481644 CASD1Q96PB1 797 aa20.79■□□□□ 0.92
HSPG2-210ENST00000481644 GPRC5CQ9NQ84 441 aa20.79■□□□□ 0.92
HSPG2-210ENST00000481644 FAM105AQ9NUU6 356 aa20.79■□□□□ 0.92
HSPG2-210ENST00000481644 TYW1Q9NV66 732 aaKnown RBP20.79■□□□□ 0.92
HSPG2-210ENST00000481644 VWA3AA6NCI4 1184 aa20.78■□□□□ 0.92
HSPG2-210ENST00000481644 INO80B-WBP1J3KQ70 363 aa20.78■□□□□ 0.92
HSPG2-210ENST00000481644 GRM6O15303 877 aa20.78■□□□□ 0.92
HSPG2-210ENST00000481644 CDC25AP30304 524 aa20.78■□□□□ 0.92
HSPG2-210ENST00000481644 RAB27AP51159 221 aa20.78■□□□□ 0.92
HSPG2-210ENST00000481644 TIGD5Q53EQ6 642 aa20.78■□□□□ 0.92
HSPG2-210ENST00000481644 NAALADL2Q58DX5 795 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms