RNA–Protein interactions for RNA: ENST00000481628.1

CLIP4-210, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-210ENST00000481628 REC8O95072 547 aa10.26□□□□□ -0.77
CLIP4-210ENST00000481628 TDP2O95551 362 aa10.26□□□□□ -0.77
CLIP4-210ENST00000481628 IBSPP21815 317 aaPredicted RBP10.26□□□□□ -0.77
CLIP4-210ENST00000481628 TECP42680 631 aa10.26□□□□□ -0.77
CLIP4-210ENST00000481628 KRT17Q04695 432 aa10.26□□□□□ -0.77
CLIP4-210ENST00000481628 DRP2Q13474 957 aa10.26□□□□□ -0.77
CLIP4-210ENST00000481628 SMC1AQ14683 1233 aaKnown RBP10.26□□□□□ -0.77
CLIP4-210ENST00000481628 PTPN21Q16825 1174 aa10.26□□□□□ -0.77
CLIP4-210ENST00000481628 GALNT17Q6IS24 598 aa10.26□□□□□ -0.77
CLIP4-210ENST00000481628 TRMT1LQ7Z2T5 733 aaKnown RBP10.26□□□□□ -0.77
CLIP4-210ENST00000481628 ZNF410Q86VK4 478 aa10.26□□□□□ -0.77
CLIP4-210ENST00000481628 FBXL6Q8N531 539 aa10.26□□□□□ -0.77
CLIP4-210ENST00000481628 MRPL43Q8N983 215 aaKnown RBP10.26□□□□□ -0.77
CLIP4-210ENST00000481628 PRSS33Q8NF86 280 aa10.26□□□□□ -0.77
CLIP4-210ENST00000481628 GCOM2Q9BZD3 368 aaPredicted RBP10.26□□□□□ -0.77
CLIP4-210ENST00000481628 NCOA5Q9HCD5 579 aaKnown RBP10.26□□□□□ -0.77
CLIP4-210ENST00000481628 ZSWIM6Q9HCJ5 1215 aa10.26□□□□□ -0.77
CLIP4-210ENST00000481628 ENTPD7Q9NQZ7 604 aa10.26□□□□□ -0.77
CLIP4-210ENST00000481628 HCFC2Q9Y5Z7 792 aa10.26□□□□□ -0.77
CLIP4-210ENST00000481628 WDFY4Q6ZS81 3184 aa10.25□□□□□ -0.77
CLIP4-210ENST00000481628 CHMP2AO43633 222 aa10.25□□□□□ -0.77
CLIP4-210ENST00000481628 ZNF623O75123 536 aa10.25□□□□□ -0.77
CLIP4-210ENST00000481628 MAFO75444 373 aaPredicted RBP10.25□□□□□ -0.77
CLIP4-210ENST00000481628 DEXIO95424 95 aa10.25□□□□□ -0.77
CLIP4-210ENST00000481628 SKIP12755 728 aa10.25□□□□□ -0.77
CLIP4-210ENST00000481628 FGFR4P22455 802 aa10.25□□□□□ -0.77
CLIP4-210ENST00000481628 SFPQP23246 707 aaKnown RBP eCLIP10.25□□□□□ -0.77
CLIP4-210ENST00000481628 PBX3P40426 434 aa10.25□□□□□ -0.77
CLIP4-210ENST00000481628 PHKA2P46019 1235 aa10.25□□□□□ -0.77
CLIP4-210ENST00000481628 POLGP54098 1239 aaPredicted RBP10.25□□□□□ -0.77
CLIP4-210ENST00000481628 PTPN5P54829 565 aa10.25□□□□□ -0.77
CLIP4-210ENST00000481628 NLRP5P59047 1200 aa10.25□□□□□ -0.77
CLIP4-210ENST00000481628 ITIH3Q06033 890 aa10.25□□□□□ -0.77
CLIP4-210ENST00000481628 TPRNQ4KMQ1 711 aa10.25□□□□□ -0.77
CLIP4-210ENST00000481628 RUFY3Q7L099 469 aa10.25□□□□□ -0.77
CLIP4-210ENST00000481628 MIER3Q7Z3K6 550 aa10.25□□□□□ -0.77
CLIP4-210ENST00000481628 TMC7Q7Z402 723 aa10.25□□□□□ -0.77
CLIP4-210ENST00000481628 TRIM22Q8IYM9 498 aa10.25□□□□□ -0.77
CLIP4-210ENST00000481628 BLIDQ8IZY5 108 aa10.25□□□□□ -0.77
CLIP4-210ENST00000481628 HELQQ8TDG4 1101 aa10.25□□□□□ -0.77
CLIP4-210ENST00000481628 NLRP7Q8WX94 980 aa10.25□□□□□ -0.77
CLIP4-210ENST00000481628 PBXIP1Q96AQ6 731 aa10.25□□□□□ -0.77
CLIP4-210ENST00000481628 ZNF274Q96GC6 653 aaPredicted RBP10.25□□□□□ -0.77
CLIP4-210ENST00000481628 RPGRIP1Q96KN7 1286 aa10.25□□□□□ -0.77
CLIP4-210ENST00000481628 NECTIN4Q96NY8 510 aa10.25□□□□□ -0.77
CLIP4-210ENST00000481628 TM6SF1Q9BZW5 370 aa10.25□□□□□ -0.77
CLIP4-210ENST00000481628 ZBP1Q9H171 429 aa10.25□□□□□ -0.77
CLIP4-210ENST00000481628 SEPT9Q9UHD8 586 aaPredicted RBP10.25□□□□□ -0.77
CLIP4-210ENST00000481628 PPME1Q9Y570 386 aa10.25□□□□□ -0.77
CLIP4-210ENST00000481628 ZDBF2Q9HCK1 2354 aa10.24□□□□□ -0.77
CLIP4-210ENST00000481628 DENND4AQ7Z401 1863 aa10.24□□□□□ -0.77
CLIP4-210ENST00000481628 A0A087WZ62 844 aa10.24□□□□□ -0.77
CLIP4-210ENST00000481628 CLASP2O75122 1294 aaKnown RBP10.24□□□□□ -0.77
CLIP4-210ENST00000481628 RAB27AP51159 221 aa10.24□□□□□ -0.77
CLIP4-210ENST00000481628 NUBP1P53384 320 aa10.24□□□□□ -0.77
CLIP4-210ENST00000481628 BCAR1P56945 870 aa10.24□□□□□ -0.77
CLIP4-210ENST00000481628 PSMC5P62195 406 aa10.24□□□□□ -0.77
CLIP4-210ENST00000481628 CCT2P78371 535 aaKnown RBP10.24□□□□□ -0.77
CLIP4-210ENST00000481628 SSRP1Q08945 709 aaKnown RBP10.24□□□□□ -0.77
CLIP4-210ENST00000481628 PPP2R5CQ13362 524 aa10.24□□□□□ -0.77
CLIP4-210ENST00000481628 GIT2Q14161 759 aa10.24□□□□□ -0.77
CLIP4-210ENST00000481628 MTERF2Q49AM1 385 aa10.24□□□□□ -0.77
CLIP4-210ENST00000481628 ANO5Q75V66 913 aa10.24□□□□□ -0.77
CLIP4-210ENST00000481628 SUGP1Q8IWZ8 645 aaKnown RBP10.24□□□□□ -0.77
CLIP4-210ENST00000481628 GJA10Q969M2 543 aa10.24□□□□□ -0.77
CLIP4-210ENST00000481628 ZNF668Q96K58 619 aaPredicted RBP10.24□□□□□ -0.77
CLIP4-210ENST00000481628 SCLT1Q96NL6 688 aa10.24□□□□□ -0.77
CLIP4-210ENST00000481628 JPH2Q9BR39 696 aaPredicted RBP10.24□□□□□ -0.77
CLIP4-210ENST00000481628 FDXACB1Q9BRP7 624 aaPredicted RBP10.24□□□□□ -0.77
CLIP4-210ENST00000481628 INO80BQ9C086 356 aaPredicted RBP10.24□□□□□ -0.77
CLIP4-210ENST00000481628 ADAM7Q9H2U9 754 aa10.24□□□□□ -0.77
CLIP4-210ENST00000481628 KCNMB3Q9NPA1 279 aa10.24□□□□□ -0.77
CLIP4-210ENST00000481628 FAM105AQ9NUU6 356 aa10.24□□□□□ -0.77
CLIP4-210ENST00000481628 DZANK1Q9NVP4 752 aa10.24□□□□□ -0.77
CLIP4-210ENST00000481628 VAV3Q9UKW4 847 aa10.24□□□□□ -0.77
CLIP4-210ENST00000481628 TMEM150BA6NC51 233 aa10.23□□□□□ -0.77
CLIP4-210ENST00000481628 SLC37A4O43826 429 aa10.23□□□□□ -0.77
CLIP4-210ENST00000481628 CTSAP10619 480 aa10.23□□□□□ -0.77
CLIP4-210ENST00000481628 GCFC2P16383 781 aaKnown RBP10.23□□□□□ -0.77
CLIP4-210ENST00000481628 MTHFRP42898 656 aa10.23□□□□□ -0.77
CLIP4-210ENST00000481628 ALDH7A1P49419 539 aaKnown RBP10.23□□□□□ -0.77
CLIP4-210ENST00000481628 DNM2P50570 870 aa10.23□□□□□ -0.77
CLIP4-210ENST00000481628 TCF15Q12870 199 aa10.23□□□□□ -0.77
CLIP4-210ENST00000481628 NONOQ15233 471 aaKnown RBP eCLIP10.23□□□□□ -0.77
CLIP4-210ENST00000481628 IER5LQ5T953 404 aa10.23□□□□□ -0.77
CLIP4-210ENST00000481628 PPP4R3AQ6IN85 833 aa10.23□□□□□ -0.77
CLIP4-210ENST00000481628 KIAA1841Q6NSI8 718 aa10.23□□□□□ -0.77
CLIP4-210ENST00000481628 LLGL2Q6P1M3 1020 aa10.23□□□□□ -0.77
CLIP4-210ENST00000481628 KRT25Q7Z3Z0 450 aa10.23□□□□□ -0.77
CLIP4-210ENST00000481628 DDX53Q86TM3 631 aaKnown RBP10.23□□□□□ -0.77
CLIP4-210ENST00000481628 TMEM173Q86WV6 379 aaPredicted RBP10.23□□□□□ -0.77
CLIP4-210ENST00000481628 RNF169Q8NCN4 708 aa10.23□□□□□ -0.77
CLIP4-210ENST00000481628 TMEM169Q96HH4 297 aa10.23□□□□□ -0.77
CLIP4-210ENST00000481628 IGSF21Q96ID5 467 aa10.23□□□□□ -0.77
CLIP4-210ENST00000481628 FAM20AQ96MK3 541 aa10.23□□□□□ -0.77
CLIP4-210ENST00000481628 POMKQ9H5K3 350 aa10.23□□□□□ -0.77
CLIP4-210ENST00000481628 DHX33Q9H6R0 707 aaKnown RBP10.23□□□□□ -0.77
CLIP4-210ENST00000481628 NRDE2Q9H7Z3 1164 aa10.23□□□□□ -0.77
CLIP4-210ENST00000481628 IFT122Q9HBG6 1241 aa10.23□□□□□ -0.77
CLIP4-210ENST00000481628 AGPAT5Q9NUQ2 364 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms