RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 NDUFV1P49821 464 aa13.59□□□□□ -0.23
SQSTM1-207ENST00000481335 PCBP1Q15365 356 aaKnown RBP eCLIP13.59□□□□□ -0.231e-6■□□□□ 8.3
SQSTM1-207ENST00000481335 OTUD6AQ7L8S5 288 aa13.59□□□□□ -0.23
SQSTM1-207ENST00000481335 ZNF598Q86UK7 904 aaKnown RBP13.59□□□□□ -0.23
SQSTM1-207ENST00000481335 SMRP1Q8NCR6 262 aa13.59□□□□□ -0.23
SQSTM1-207ENST00000481335 MRPS27Q92552 414 aaKnown RBP13.59□□□□□ -0.23
SQSTM1-207ENST00000481335 HAS1Q92839 578 aa13.59□□□□□ -0.23
SQSTM1-207ENST00000481335 MSLNLQ96KJ4 702 aa13.59□□□□□ -0.23
SQSTM1-207ENST00000481335 ZNF558Q96NG5 402 aa13.59□□□□□ -0.23
SQSTM1-207ENST00000481335 EPHX3Q9H6B9 360 aa13.59□□□□□ -0.23
SQSTM1-207ENST00000481335 DHX33Q9H6R0 707 aaKnown RBP13.59□□□□□ -0.23
SQSTM1-207ENST00000481335 NGRNQ9NPE2 291 aaKnown RBP13.59□□□□□ -0.23
SQSTM1-207ENST00000481335 SUCLA2Q9P2R7 463 aaPredicted RBP13.59□□□□□ -0.23
SQSTM1-207ENST00000481335 ASAP2O43150 1006 aa13.58□□□□□ -0.24
SQSTM1-207ENST00000481335 MARCH6O60337 910 aa13.58□□□□□ -0.24
SQSTM1-207ENST00000481335 IRS1P35568 1242 aa13.58□□□□□ -0.24
SQSTM1-207ENST00000481335 PHKA2P46019 1235 aa13.58□□□□□ -0.24
SQSTM1-207ENST00000481335 POLGP54098 1239 aaPredicted RBP13.58□□□□□ -0.24
SQSTM1-207ENST00000481335 KRT17Q04695 432 aa13.58□□□□□ -0.24
SQSTM1-207ENST00000481335 SPIRE1Q08AE8 756 aa13.58□□□□□ -0.24
SQSTM1-207ENST00000481335 DRP2Q13474 957 aa13.58□□□□□ -0.24
SQSTM1-207ENST00000481335 TRIM29Q14134 588 aa13.58□□□□□ -0.24
SQSTM1-207ENST00000481335 ME3Q16798 604 aa13.58□□□□□ -0.24
SQSTM1-207ENST00000481335 KCNT2Q6UVM3 1135 aa13.58□□□□□ -0.24
SQSTM1-207ENST00000481335 SRGAP1Q7Z6B7 1085 aa13.58□□□□□ -0.24
SQSTM1-207ENST00000481335 ADGRD2Q7Z7M1 963 aa13.58□□□□□ -0.24
SQSTM1-207ENST00000481335 POTEDQ86YR6 584 aa13.58□□□□□ -0.24
SQSTM1-207ENST00000481335 RHPN2Q8IUC4 686 aa13.58□□□□□ -0.24
SQSTM1-207ENST00000481335 NSUN7Q8NE18 718 aaKnown RBP13.58□□□□□ -0.24
SQSTM1-207ENST00000481335 TCP11Q8WWU5 503 aa13.58□□□□□ -0.24
SQSTM1-207ENST00000481335 PSPC1Q8WXF1 523 aaKnown RBP13.58□□□□□ -0.24
SQSTM1-207ENST00000481335 TNFRSF25Q93038 417 aa13.58□□□□□ -0.24
SQSTM1-207ENST00000481335 LXNQ9BS40 222 aa13.58□□□□□ -0.24
SQSTM1-207ENST00000481335 ZSWIM4Q9H7M6 989 aa13.58□□□□□ -0.24
SQSTM1-207ENST00000481335 CD320Q9NPF0 282 aa13.58□□□□□ -0.24
SQSTM1-207ENST00000481335 RNF19AQ9NV58 838 aa13.58□□□□□ -0.24
SQSTM1-207ENST00000481335 STK39Q9UEW8 545 aa13.58□□□□□ -0.24
SQSTM1-207ENST00000481335 COL4A3BPQ9Y5P4 624 aa13.58□□□□□ -0.24
SQSTM1-207ENST00000481335 A0A087WZ62 844 aa13.57□□□□□ -0.24
SQSTM1-207ENST00000481335 ZNF623O75123 536 aa13.57□□□□□ -0.24
SQSTM1-207ENST00000481335 LYPLA2O95372 231 aa13.57□□□□□ -0.24
SQSTM1-207ENST00000481335 FDPSP14324 419 aaKnown RBP13.57□□□□□ -0.24
SQSTM1-207ENST00000481335 ATF7P17544 494 aaPredicted RBP13.57□□□□□ -0.24
SQSTM1-207ENST00000481335 IBSPP21815 317 aaPredicted RBP13.57□□□□□ -0.24
SQSTM1-207ENST00000481335 YWHABP31946 246 aaKnown RBP13.57□□□□□ -0.24
SQSTM1-207ENST00000481335 NRIP1P48552 1158 aa13.57□□□□□ -0.24
SQSTM1-207ENST00000481335 DLX2Q07687 328 aaPredicted RBP13.57□□□□□ -0.24
SQSTM1-207ENST00000481335 BMS1Q14692 1282 aaKnown RBP13.57□□□□□ -0.24
SQSTM1-207ENST00000481335 DUSP6Q16828 381 aa13.57□□□□□ -0.24
SQSTM1-207ENST00000481335 CLLU1OSQ5K130 101 aa13.57□□□□□ -0.24
SQSTM1-207ENST00000481335 TWF2Q6IBS0 349 aaKnown RBP13.57□□□□□ -0.24
SQSTM1-207ENST00000481335 TMEM184AQ6ZMB5 413 aa13.57□□□□□ -0.24
SQSTM1-207ENST00000481335 OXER1Q8TDS5 423 aa13.57□□□□□ -0.24
SQSTM1-207ENST00000481335 MICAL1Q8TDZ2 1067 aa13.57□□□□□ -0.24
SQSTM1-207ENST00000481335 CEP170P1Q96L14 293 aa13.57□□□□□ -0.24
SQSTM1-207ENST00000481335 FDXACB1Q9BRP7 624 aaPredicted RBP13.57□□□□□ -0.24
SQSTM1-207ENST00000481335 LRFN3Q9BTN0 628 aa13.57□□□□□ -0.24
SQSTM1-207ENST00000481335 IGFLR1Q9H665 355 aa13.57□□□□□ -0.24
SQSTM1-207ENST00000481335 TLE6Q9H808 572 aa13.57□□□□□ -0.24
SQSTM1-207ENST00000481335 HCN4Q9Y3Q4 1203 aa13.57□□□□□ -0.24
SQSTM1-207ENST00000481335 TMEM150BA6NC51 233 aa13.56□□□□□ -0.24
SQSTM1-207ENST00000481335 PRR33A8MZF0 331 aa13.56□□□□□ -0.24
SQSTM1-207ENST00000481335 DCXO43602 365 aa13.56□□□□□ -0.24
SQSTM1-207ENST00000481335 GTF2F1P35269 517 aaKnown RBP eCLIP13.56□□□□□ -0.249e-8■■■■■ 28.6
SQSTM1-207ENST00000481335 NEK4P51957 841 aa13.56□□□□□ -0.24
SQSTM1-207ENST00000481335 NR5A1Q13285 461 aa13.56□□□□□ -0.24
SQSTM1-207ENST00000481335 ORC2Q13416 577 aaPredicted RBP13.56□□□□□ -0.24
SQSTM1-207ENST00000481335 PLA2G4FQ68DD2 849 aa13.56□□□□□ -0.24
SQSTM1-207ENST00000481335 LRRC55Q6ZSA7 311 aa13.56□□□□□ -0.24
SQSTM1-207ENST00000481335 CATSPER4Q7RTX7 472 aa13.56□□□□□ -0.24
SQSTM1-207ENST00000481335 PGBD4Q96DM1 585 aa13.56□□□□□ -0.24
SQSTM1-207ENST00000481335 NLRP4Q96MN2 994 aa13.56□□□□□ -0.24
SQSTM1-207ENST00000481335 IFT122Q9HBG6 1241 aa13.56□□□□□ -0.24
SQSTM1-207ENST00000481335 GJB4Q9NTQ9 266 aa13.56□□□□□ -0.24
SQSTM1-207ENST00000481335 AGPAT5Q9NUQ2 364 aa13.56□□□□□ -0.24
SQSTM1-207ENST00000481335 FAM105AQ9NUU6 356 aa13.56□□□□□ -0.24
SQSTM1-207ENST00000481335 SPG21Q9NZD8 308 aa13.56□□□□□ -0.24
SQSTM1-207ENST00000481335 CLEC1BQ9P126 229 aa13.56□□□□□ -0.24
SQSTM1-207ENST00000481335 PCDHA12Q9UN75 941 aa13.56□□□□□ -0.24
SQSTM1-207ENST00000481335 PIN4Q9Y237 131 aaKnown RBP13.56□□□□□ -0.24
SQSTM1-207ENST00000481335 LINC01565O15544 149 aa13.55□□□□□ -0.24
SQSTM1-207ENST00000481335 NEMFO60524 1076 aa13.55□□□□□ -0.24
SQSTM1-207ENST00000481335 LARGE1O95461 756 aa13.55□□□□□ -0.24
SQSTM1-207ENST00000481335 GLP2RO95838 553 aa13.55□□□□□ -0.24
SQSTM1-207ENST00000481335 ALDH7A1P49419 539 aaKnown RBP13.55□□□□□ -0.24
SQSTM1-207ENST00000481335 POU5F1BQ06416 359 aa13.55□□□□□ -0.24
SQSTM1-207ENST00000481335 GIT2Q14161 759 aa13.55□□□□□ -0.24
SQSTM1-207ENST00000481335 MXD4Q14582 209 aaPredicted RBP13.55□□□□□ -0.24
SQSTM1-207ENST00000481335 EMC2Q15006 297 aa13.55□□□□□ -0.24
SQSTM1-207ENST00000481335 CALCRLQ16602 461 aa13.55□□□□□ -0.24
SQSTM1-207ENST00000481335 EARS2Q5JPH6 523 aaKnown RBP13.55□□□□□ -0.24
SQSTM1-207ENST00000481335 NCAPH2Q6IBW4 605 aa13.55□□□□□ -0.24
SQSTM1-207ENST00000481335 GLB1LQ6UWU2 654 aa13.55□□□□□ -0.24
SQSTM1-207ENST00000481335 DIS3L2Q8IYB7 885 aaKnown RBP13.55□□□□□ -0.24
SQSTM1-207ENST00000481335 SLC39A11Q8N1S5 342 aa13.55□□□□□ -0.24
SQSTM1-207ENST00000481335 KHSRPQ92945 711 aaKnown RBP eCLIP13.55□□□□□ -0.24
SQSTM1-207ENST00000481335 ZNF668Q96K58 619 aaPredicted RBP13.55□□□□□ -0.24
SQSTM1-207ENST00000481335 MTRQ99707 1265 aa13.55□□□□□ -0.24
SQSTM1-207ENST00000481335 TCF25Q9BQ70 676 aa13.55□□□□□ -0.24
SQSTM1-207ENST00000481335 SH2D3AQ9BRG2 576 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms