RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 REV3LO60673 3130 aa16.77■□□□□ 0.27
TDP2-205ENST00000480495 NCK2O43639 380 aa16.76■□□□□ 0.27
TDP2-205ENST00000480495 CSDE1O75534 798 aaKnown RBP16.76■□□□□ 0.27
TDP2-205ENST00000480495 FGFR1P11362 822 aa16.76■□□□□ 0.27
TDP2-205ENST00000480495 XRCC6P12956 609 aaKnown RBP eCLIP16.76■□□□□ 0.27
TDP2-205ENST00000480495 MCM2P49736 904 aa16.76■□□□□ 0.27
TDP2-205ENST00000480495 KCNQ1P51787 676 aa16.76■□□□□ 0.27
TDP2-205ENST00000480495 CSPP1Q1MSJ5 1256 aa16.76■□□□□ 0.27
TDP2-205ENST00000480495 TTC38Q5R3I4 469 aa16.76■□□□□ 0.27
TDP2-205ENST00000480495 SPOUT1Q5T280 376 aaKnown RBP16.76■□□□□ 0.27
TDP2-205ENST00000480495 KSR1Q8IVT5 923 aa16.76■□□□□ 0.27
TDP2-205ENST00000480495 KLHL23Q8NBE8 558 aa16.76■□□□□ 0.27
TDP2-205ENST00000480495 SPPL3Q8TCT6 385 aa16.76■□□□□ 0.27
TDP2-205ENST00000480495 PRPF31Q8WWY3 499 aaKnown RBP16.76■□□□□ 0.27
TDP2-205ENST00000480495 RSPH1Q8WYR4 309 aa16.76■□□□□ 0.27
TDP2-205ENST00000480495 TMEM143Q96AN5 459 aa16.76■□□□□ 0.27
TDP2-205ENST00000480495 UHRF1Q96T88 793 aaPredicted RBP16.76■□□□□ 0.27
TDP2-205ENST00000480495 MTRQ99707 1265 aa16.76■□□□□ 0.27
TDP2-205ENST00000480495 IFT122Q9HBG6 1241 aa16.76■□□□□ 0.27
TDP2-205ENST00000480495 POTEMA6NI47 508 aa16.75■□□□□ 0.27
TDP2-205ENST00000480495 ZBTB39O15060 712 aa16.75■□□□□ 0.27
TDP2-205ENST00000480495 DGAT1O75907 488 aa16.75■□□□□ 0.27
TDP2-205ENST00000480495 ITGB1P05556 798 aa16.75■□□□□ 0.27
TDP2-205ENST00000480495 OR52Z1P0C646 297 aa16.75■□□□□ 0.27
TDP2-205ENST00000480495 SKIP12755 728 aa16.75■□□□□ 0.27
TDP2-205ENST00000480495 U2AF2P26368 475 aaKnown RBP eCLIP16.75■□□□□ 0.27
TDP2-205ENST00000480495 LAMTOR4Q0VGL1 99 aa16.75■□□□□ 0.27
TDP2-205ENST00000480495 COL19A1Q14993 1142 aa16.75■□□□□ 0.27
TDP2-205ENST00000480495 ZNF174Q15697 407 aa16.75■□□□□ 0.27
TDP2-205ENST00000480495 CATSPER4Q7RTX7 472 aa16.75■□□□□ 0.27
TDP2-205ENST00000480495 SRGAP1Q7Z6B7 1085 aa16.75■□□□□ 0.27
TDP2-205ENST00000480495 ZNF598Q86UK7 904 aaKnown RBP16.75■□□□□ 0.27
TDP2-205ENST00000480495 ABI1Q8IZP0 508 aa16.75■□□□□ 0.27
TDP2-205ENST00000480495 ERMNQ8TAM6 284 aa16.75■□□□□ 0.27
TDP2-205ENST00000480495 CCDC43Q96MW1 224 aaKnown RBP16.75■□□□□ 0.27
TDP2-205ENST00000480495 TBC1D32Q96NH3 1257 aa16.75■□□□□ 0.27
TDP2-205ENST00000480495 CASD1Q96PB1 797 aa16.75■□□□□ 0.27
TDP2-205ENST00000480495 TUFT1Q9NNX1 390 aa16.75■□□□□ 0.27
TDP2-205ENST00000480495 ALG13Q9NP73 1137 aaKnown RBP16.75■□□□□ 0.27
TDP2-205ENST00000480495 RNF19AQ9NV58 838 aa16.75■□□□□ 0.27
TDP2-205ENST00000480495 TYW1Q9NV66 732 aaKnown RBP16.75■□□□□ 0.27
TDP2-205ENST00000480495 TTC28Q96AY4 2481 aa16.74■□□□□ 0.27
TDP2-205ENST00000480495 TNFRSF10AO00220 468 aa16.74■□□□□ 0.27
TDP2-205ENST00000480495 SRGAP2CP0DJJ0 459 aa16.74■□□□□ 0.27
TDP2-205ENST00000480495 LAG3P18627 525 aa16.74■□□□□ 0.27
TDP2-205ENST00000480495 UBE3AQ05086 875 aa16.74■□□□□ 0.27
TDP2-205ENST00000480495 MXD4Q14582 209 aaPredicted RBP16.74■□□□□ 0.27
TDP2-205ENST00000480495 LEXMQ3ZCV2 418 aa16.74■□□□□ 0.27
TDP2-205ENST00000480495 TWF2Q6IBS0 349 aaKnown RBP16.74■□□□□ 0.27
TDP2-205ENST00000480495 FERMT3Q86UX7 667 aa16.74■□□□□ 0.27
TDP2-205ENST00000480495 COLGALT1Q8NBJ5 622 aa16.74■□□□□ 0.27
TDP2-205ENST00000480495 RNF169Q8NCN4 708 aa16.74■□□□□ 0.27
TDP2-205ENST00000480495 PPP2R3CQ969Q6 453 aa16.74■□□□□ 0.27
TDP2-205ENST00000480495 PABPC5Q96DU9 382 aaKnown RBP16.74■□□□□ 0.27
TDP2-205ENST00000480495 TMX3Q96JJ7 454 aa16.74■□□□□ 0.27
TDP2-205ENST00000480495 POLR3CQ9BUI4 534 aaPredicted RBP16.74■□□□□ 0.27
TDP2-205ENST00000480495 CWH43Q9H720 699 aa16.74■□□□□ 0.27
TDP2-205ENST00000480495 PIN4Q9Y237 131 aaKnown RBP16.74■□□□□ 0.27
TDP2-205ENST00000480495 SPATA31C1P0DKV0 1188 aa16.73■□□□□ 0.27
TDP2-205ENST00000480495 KCNA5P22460 613 aa16.73■□□□□ 0.27
TDP2-205ENST00000480495 TECP42680 631 aa16.73■□□□□ 0.27
TDP2-205ENST00000480495 PHKA2P46019 1235 aa16.73■□□□□ 0.27
TDP2-205ENST00000480495 RARRES1P49788 294 aa16.73■□□□□ 0.27
TDP2-205ENST00000480495 RAB27AP51159 221 aa16.73■□□□□ 0.27
TDP2-205ENST00000480495 POU5F1BQ06416 359 aa16.73■□□□□ 0.27
TDP2-205ENST00000480495 CAMK1Q14012 370 aa16.73■□□□□ 0.27
TDP2-205ENST00000480495 PCBP1Q15365 356 aaKnown RBP eCLIP16.73■□□□□ 0.27
TDP2-205ENST00000480495 LRRC43Q8N309 656 aa16.73■□□□□ 0.27
TDP2-205ENST00000480495 RNF149Q8NC42 400 aa16.73■□□□□ 0.27
TDP2-205ENST00000480495 POF1BQ8WVV4 589 aa16.73■□□□□ 0.27
TDP2-205ENST00000480495 XPNPEP1Q9NQW7 623 aa16.73■□□□□ 0.27
TDP2-205ENST00000480495 BMP2KQ9NSY1 1161 aaPredicted RBP16.73■□□□□ 0.27
TDP2-205ENST00000480495 AGPAT5Q9NUQ2 364 aa16.73■□□□□ 0.27
TDP2-205ENST00000480495 SPTBN5Q9NRC6 3674 aaKnown RBP16.73■□□□□ 0.27
TDP2-205ENST00000480495 VCANP13611 3396 aa16.72■□□□□ 0.27
TDP2-205ENST00000480495 ZNF623O75123 536 aa16.72■□□□□ 0.27
TDP2-205ENST00000480495 ATF7P17544 494 aaPredicted RBP16.72■□□□□ 0.27
TDP2-205ENST00000480495 MUTP22033 750 aa16.72■□□□□ 0.27
TDP2-205ENST00000480495 DNAJB1P25685 340 aa16.72■□□□□ 0.27
TDP2-205ENST00000480495 TFDP1Q14186 410 aa16.72■□□□□ 0.27
TDP2-205ENST00000480495 PUS10Q3MIT2 529 aaKnown RBP16.72■□□□□ 0.27
TDP2-205ENST00000480495 CLLU1OSQ5K130 101 aa16.72■□□□□ 0.27
TDP2-205ENST00000480495 CATSPER3Q86XQ3 398 aa16.72■□□□□ 0.27
TDP2-205ENST00000480495 THNSL1Q8IYQ7 743 aa16.72■□□□□ 0.27
TDP2-205ENST00000480495 PIGOQ8TEQ8 1089 aa16.72■□□□□ 0.27
TDP2-205ENST00000480495 NACC1Q96RE7 527 aa16.72■□□□□ 0.27
TDP2-205ENST00000480495 MRPL9Q9BYD2 267 aaKnown RBP16.72■□□□□ 0.27
TDP2-205ENST00000480495 DBR1Q9UK59 544 aaKnown RBP16.72■□□□□ 0.27
TDP2-205ENST00000480495 FNDC1Q4ZHG4 1894 aaPredicted RBP16.71■□□□□ 0.27
TDP2-205ENST00000480495 FGF18O76093 207 aa16.71■□□□□ 0.27
TDP2-205ENST00000480495 CD2BP2O95400 341 aaKnown RBP16.71■□□□□ 0.27
TDP2-205ENST00000480495 RPA1P27694 616 aa16.71■□□□□ 0.27
TDP2-205ENST00000480495 PPM1AP35813 382 aa16.71■□□□□ 0.27
TDP2-205ENST00000480495 ARL2P36404 184 aa16.71■□□□□ 0.27
TDP2-205ENST00000480495 FXR2P51116 673 aaKnown RBP eCLIP16.71■□□□□ 0.27
TDP2-205ENST00000480495 PTENP60484 403 aa16.71■□□□□ 0.27
TDP2-205ENST00000480495 HYAL1Q12794 435 aa16.71■□□□□ 0.27
TDP2-205ENST00000480495 CTC1Q2NKJ3 1217 aa16.71■□□□□ 0.27
TDP2-205ENST00000480495 HAUS3Q68CZ6 603 aa16.71■□□□□ 0.27
TDP2-205ENST00000480495 PDE12Q6L8Q7 609 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms