RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 RTEL1Q9NZ71 1219 aa13.73□□□□□ -0.21
USP11-208ENST00000480104 GPSM3Q9Y4H4 160 aa13.73□□□□□ -0.21
USP11-208ENST00000480104 F5P12259 2224 aa13.73□□□□□ -0.21
USP11-208ENST00000480104 EIF4E1BA6NMX2 242 aaKnown RBP13.72□□□□□ -0.21
USP11-208ENST00000480104 GPR182O15218 404 aa13.72□□□□□ -0.21
USP11-208ENST00000480104 NCAM2O15394 837 aa13.72□□□□□ -0.21
USP11-208ENST00000480104 ZC3H11AO75152 810 aaKnown RBP eCLIP13.72□□□□□ -0.21
USP11-208ENST00000480104 ZFYP08048 801 aaPredicted RBP13.72□□□□□ -0.21
USP11-208ENST00000480104 PLCB4Q15147 1175 aa13.72□□□□□ -0.21
USP11-208ENST00000480104 CYP26C1Q6V0L0 522 aa13.72□□□□□ -0.21
USP11-208ENST00000480104 FAM228AQ86W67 206 aa13.72□□□□□ -0.21
USP11-208ENST00000480104 FAM160A2Q8N612 972 aaPredicted RBP13.72□□□□□ -0.21
USP11-208ENST00000480104 HELQQ8TDG4 1101 aa13.72□□□□□ -0.21
USP11-208ENST00000480104 IGSF21Q96ID5 467 aa13.72□□□□□ -0.21
USP11-208ENST00000480104 JMJD4Q9H9V9 463 aa13.72□□□□□ -0.21
USP11-208ENST00000480104 VAT1LQ9HCJ6 419 aa13.72□□□□□ -0.21
USP11-208ENST00000480104 MAP3K20Q9NYL2 800 aaKnown RBP13.72□□□□□ -0.21
USP11-208ENST00000480104 ADAMTS20P59510 1910 aa13.72□□□□□ -0.21
USP11-208ENST00000480104 SMIM35A0A1B0GVV1 85 aa13.71□□□□□ -0.21
USP11-208ENST00000480104 GSTTP1A0A1W2PQM5 241 aa13.71□□□□□ -0.21
USP11-208ENST00000480104 PPP1R11O60927 126 aaPredicted RBP13.71□□□□□ -0.21
USP11-208ENST00000480104 SSBP05455 408 aaKnown RBP eCLIP13.71□□□□□ -0.21
USP11-208ENST00000480104 FGRP09769 529 aa13.71□□□□□ -0.21
USP11-208ENST00000480104 PPP2R5DQ14738 602 aa13.71□□□□□ -0.21
USP11-208ENST00000480104 ODR4Q5SWX8 454 aa13.71□□□□□ -0.21
USP11-208ENST00000480104 ECHDC2Q86YB7 292 aa13.71□□□□□ -0.21
USP11-208ENST00000480104 NME8Q8N427 588 aa13.71□□□□□ -0.21
USP11-208ENST00000480104 PPP1R16BQ96T49 567 aa13.71□□□□□ -0.21
USP11-208ENST00000480104 SENP7Q9BQF6 1050 aa13.71□□□□□ -0.21
USP11-208ENST00000480104 CHRDQ9H2X0 955 aa13.71□□□□□ -0.21
USP11-208ENST00000480104 SMARCAD1Q9H4L7 1026 aa13.71□□□□□ -0.21
USP11-208ENST00000480104 CACNA2D2Q9NY47 1150 aa13.71□□□□□ -0.21
USP11-208ENST00000480104 ANAPC4Q9UJX5 808 aa13.71□□□□□ -0.21
USP11-208ENST00000480104 MYH15Q9Y2K3 1946 aa13.7□□□□□ -0.22
USP11-208ENST00000480104 ASXL3Q9C0F0 2248 aa13.7□□□□□ -0.22
USP11-208ENST00000480104 CHURC1-FNTBB4DL54 471 aa13.7□□□□□ -0.22
USP11-208ENST00000480104 STAM2O75886 525 aa13.7□□□□□ -0.22
USP11-208ENST00000480104 ZNF806P0C7X5 589 aa13.7□□□□□ -0.22
USP11-208ENST00000480104 FNTBP49356 437 aa13.7□□□□□ -0.22
USP11-208ENST00000480104 PFKPQ01813 784 aa13.7□□□□□ -0.22
USP11-208ENST00000480104 ADCY1Q08828 1119 aa13.7□□□□□ -0.22
USP11-208ENST00000480104 ZKSCAN2Q63HK3 967 aa13.7□□□□□ -0.22
USP11-208ENST00000480104 SEPT1Q8WYJ6 367 aa13.7□□□□□ -0.22
USP11-208ENST00000480104 NELL2Q99435 816 aa13.7□□□□□ -0.22
USP11-208ENST00000480104 AMNQ9BXJ7 453 aa13.7□□□□□ -0.22
USP11-208ENST00000480104 MRPL9Q9BYD2 267 aaKnown RBP13.7□□□□□ -0.22
USP11-208ENST00000480104 FRMPD4Q14CM0 1322 aa13.69□□□□□ -0.22
USP11-208ENST00000480104 GCOM1H8Y6P7 765 aaPredicted RBP13.69□□□□□ -0.22
USP11-208ENST00000480104 POLR2MP0CAP2 368 aa13.69□□□□□ -0.22
USP11-208ENST00000480104 RLBP1P12271 317 aa13.69□□□□□ -0.22
USP11-208ENST00000480104 COL28A1Q2UY09 1125 aa13.69□□□□□ -0.22
USP11-208ENST00000480104 ZNF852Q6ZMS4 543 aa13.69□□□□□ -0.22
USP11-208ENST00000480104 PHKBQ93100 1093 aa13.69□□□□□ -0.22
USP11-208ENST00000480104 TTC14Q96N46 770 aa13.69□□□□□ -0.22
USP11-208ENST00000480104 OSMRQ99650 979 aa13.69□□□□□ -0.22
USP11-208ENST00000480104 ARRDC1-AS1Q9H2J1 176 aa13.69□□□□□ -0.22
USP11-208ENST00000480104 PIDD1Q9HB75 910 aa13.69□□□□□ -0.22
USP11-208ENST00000480104 SHISA7A6NL88 538 aa13.68□□□□□ -0.22
USP11-208ENST00000480104 AXIN1O15169 862 aa13.68□□□□□ -0.22
USP11-208ENST00000480104 LILRB3O75022 631 aa13.68□□□□□ -0.22
USP11-208ENST00000480104 CCR3P51677 355 aa13.68□□□□□ -0.22
USP11-208ENST00000480104 KIZQ2M2Z5 673 aa13.68□□□□□ -0.22
USP11-208ENST00000480104 KIAA1211LQ6NV74 962 aa13.68□□□□□ -0.22
USP11-208ENST00000480104 MTHFD1LQ6UB35 978 aa13.68□□□□□ -0.22
USP11-208ENST00000480104 FTSJ3Q8IY81 847 aaKnown RBP13.68□□□□□ -0.22
USP11-208ENST00000480104 PCYT2Q99447 389 aa13.68□□□□□ -0.22
USP11-208ENST00000480104 SMOC1Q9H4F8 434 aa13.68□□□□□ -0.22
USP11-208ENST00000480104 MRPS17Q9Y2R5 130 aaKnown RBP13.68□□□□□ -0.22
USP11-208ENST00000480104 PIEZO2Q9H5I5 2752 aa13.68□□□□□ -0.22
USP11-208ENST00000480104 GREB1Q4ZG55 1949 aa13.68□□□□□ -0.22
USP11-208ENST00000480104 APC2O95996 2303 aa13.67□□□□□ -0.22
USP11-208ENST00000480104 ATP9AO75110 1047 aa13.67□□□□□ -0.22
USP11-208ENST00000480104 RAB11FIP3O75154 756 aa13.67□□□□□ -0.22
USP11-208ENST00000480104 GLUD1P00367 558 aa13.67□□□□□ -0.22
USP11-208ENST00000480104 KCNA2P16389 499 aa13.67□□□□□ -0.22
USP11-208ENST00000480104 SATB1Q01826 763 aa13.67□□□□□ -0.22
USP11-208ENST00000480104 ASPRV1Q53RT3 343 aa13.67□□□□□ -0.22
USP11-208ENST00000480104 SH3PXD2AQ5TCZ1 1133 aa13.67□□□□□ -0.22
USP11-208ENST00000480104 TSHZ3Q63HK5 1081 aa13.67□□□□□ -0.22
USP11-208ENST00000480104 RNF43Q68DV7 783 aa13.67□□□□□ -0.22
USP11-208ENST00000480104 ELMSAN1Q6PJG2 1045 aa13.67□□□□□ -0.22
USP11-208ENST00000480104 MAMSTRQ6ZN01 415 aa13.67□□□□□ -0.22
USP11-208ENST00000480104 CEP68Q76N32 757 aa13.67□□□□□ -0.22
USP11-208ENST00000480104 ZNF598Q86UK7 904 aaKnown RBP13.67□□□□□ -0.22
USP11-208ENST00000480104 PROSER1Q86XN7 944 aa13.67□□□□□ -0.22
USP11-208ENST00000480104 KIAA0319LQ8IZA0 1049 aa13.67□□□□□ -0.22
USP11-208ENST00000480104 ZNF687Q8N1G0 1237 aa13.67□□□□□ -0.22
USP11-208ENST00000480104 SAMD3Q8N6K7 520 aa13.67□□□□□ -0.22
USP11-208ENST00000480104 GIMAP8Q8ND71 665 aaPredicted RBP13.67□□□□□ -0.22
USP11-208ENST00000480104 GLIS3Q8NEA6 775 aa13.67□□□□□ -0.22
USP11-208ENST00000480104 KXD1Q9BQD3 176 aa13.67□□□□□ -0.22
USP11-208ENST00000480104 NDRG2Q9UN36 371 aaKnown RBP13.67□□□□□ -0.22
USP11-208ENST00000480104 ZFP37Q9Y6Q3 630 aaPredicted RBP13.67□□□□□ -0.22
USP11-208ENST00000480104 MYH6P13533 1939 aa13.66□□□□□ -0.22
USP11-208ENST00000480104 ACACAQ13085 2346 aa13.66□□□□□ -0.22
USP11-208ENST00000480104 C2CD2LO14523 706 aa13.66□□□□□ -0.22
USP11-208ENST00000480104 PAPLNO95428 1278 aa13.66□□□□□ -0.22
USP11-208ENST00000480104 GALTP07902 379 aa13.66□□□□□ -0.22
USP11-208ENST00000480104 FSHRP23945 695 aa13.66□□□□□ -0.22
USP11-208ENST00000480104 CNR2P34972 360 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms