RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 ZMYND12Q9H0C1 365 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 MRPL18Q9H0U6 180 aaKnown RBP5.62□□□□□ -1.51
PTCD3-213ENST00000480102 PXMP2Q9NR77 195 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 FRMPD2Q68DX3 1309 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-213ENST00000480102 SYNRGQ9UMZ2 1314 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 LAMA4Q16363 1823 aa5.62□□□□□ -1.51
PTCD3-213ENST00000480102 KIAA0100Q14667 2235 aaKnown RBP5.62□□□□□ -1.51
PTCD3-213ENST00000480102 A0A0U1RQG5 324 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-213ENST00000480102 ARVCFO00192 962 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 PDE2AO00408 941 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-213ENST00000480102 KIAA0355O15063 1070 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 FIBPO43427 364 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 CAND2O75155 1236 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 PPFIA4O75335 1185 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 CDKL5O76039 1030 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 SUPT20HL2P0C7V6 817 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 NOS3P29474 1203 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 GNA11P29992 359 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 PDIA3P30101 505 aaKnown RBP5.61□□□□□ -1.51
PTCD3-213ENST00000480102 HOXC8P31273 242 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 RBM25P49756 843 aaKnown RBP5.61□□□□□ -1.51
PTCD3-213ENST00000480102 METAP2P50579 478 aaKnown RBP eCLIP5.61□□□□□ -1.51
PTCD3-213ENST00000480102 ACLYP53396 1101 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 NEDD9Q14511 834 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 FSCN1Q16658 493 aaKnown RBP5.61□□□□□ -1.51
PTCD3-213ENST00000480102 PFKFB3Q16875 520 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-213ENST00000480102 NFRKBQ6P4R8 1299 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 CPLX2Q6PUV4 134 aaKnown RBP5.61□□□□□ -1.51
PTCD3-213ENST00000480102 METTL7BQ6UX53 244 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 SLC30A10Q6XR72 485 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 SLC39A5Q6ZMH5 540 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 NFXL1Q6ZNB6 911 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 RASGRP2Q7LDG7 609 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 TMEM102Q8N9M5 508 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-213ENST00000480102 GALNT11Q8NCW6 608 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 PPTC7Q8NI37 304 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 BICD2Q8TD16 824 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 WFDC12Q8WWY7 111 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 CRYGNQ8WXF5 182 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 CUL5Q93034 780 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 JAKMIP1Q96N16 626 aaKnown RBP5.61□□□□□ -1.51
PTCD3-213ENST00000480102 HHIPQ96QV1 700 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 PIGSQ96S52 555 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 FAM129BQ96TA1 746 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 KATNAL1Q9BW62 490 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 SSBP4Q9BWG4 385 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-213ENST00000480102 WDR11Q9BZH6 1224 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 PSTPIP2Q9H939 334 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 EHMT1Q9H9B1 1298 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 RIC8AQ9NPQ8 531 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 STK36Q9NRP7 1315 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 HOMER2Q9NSB8 354 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 COL20A1Q9P218 1284 aa5.61□□□□□ -1.51
PTCD3-213ENST00000480102 DDX41Q9UJV9 622 aaKnown RBP5.61□□□□□ -1.51
PTCD3-213ENST00000480102 AK9Q5TCS8 1911 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 BAZ2AQ9UIF9 1905 aaKnown RBP5.6□□□□□ -1.51
PTCD3-213ENST00000480102 KLF18A0A0U1RQI7 1052 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 A0A1W2PQ45 241 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-213ENST00000480102 A0A1W2PQY0 241 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 SOWAHDA6NJG2 315 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 GOLGA8AA7E2F4 631 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 GOLGA8BA8MQT2 603 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 H3BRJ5 948 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 TM4SF5O14894 197 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 FSCN2O14926 492 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 DEXIO95424 95 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 F2P00734 622 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 GH1P01241 217 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 ASGR1P07306 291 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 PFKMP08237 780 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 CYP3A4P08684 503 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 SCG2P13521 617 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 TAL1P17542 331 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-213ENST00000480102 CALML3P27482 149 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 CNGA1P29973 690 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 CCND2P30279 289 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 CIITAP33076 1130 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 SREBF1P36956 1147 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 SLC26A2P50443 739 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 PURAQ00577 322 aaKnown RBP5.6□□□□□ -1.51
PTCD3-213ENST00000480102 PGM5Q15124 567 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 LRIT3Q3SXY7 679 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 FOXD4L6Q3SYB3 417 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-213ENST00000480102 ARHGEF16Q5VV41 709 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 PEAR1Q5VY43 1037 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-213ENST00000480102 FAM117BQ6P1L5 589 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 MOXD1Q6UVY6 613 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 FOXD4L3Q6VB84 417 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-213ENST00000480102 Q6ZUG5 572 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 RPAINQ86UA6 219 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 TLK2Q86UE8 772 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 MICU3Q86XE3 530 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 TMEM130Q8N3G9 435 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 DAGLBQ8NCG7 672 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 CCDC148Q8NFR7 591 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 TNPO1Q92973 898 aaKnown RBP5.6□□□□□ -1.51
PTCD3-213ENST00000480102 BRF1Q92994 677 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 CITED4Q96RK1 184 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 OSMRQ99650 979 aa5.6□□□□□ -1.51
PTCD3-213ENST00000480102 AP5M1Q9H0R1 490 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms