RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 MAEAQ7L5Y9 396 aa22.38■■□□□ 1.17
COL13A1-208ENST00000479733 GDAP1Q8TB36 358 aa22.38■■□□□ 1.17
COL13A1-208ENST00000479733 CALUO43852 315 aaPredicted RBP22.38■■□□□ 1.17
COL13A1-208ENST00000479733 KRT16P08779 473 aa22.38■■□□□ 1.17
COL13A1-208ENST00000479733 GSTO1P78417 241 aa22.38■■□□□ 1.17
COL13A1-208ENST00000479733 NUGGCQ68CJ6 796 aa22.38■■□□□ 1.17
COL13A1-208ENST00000479733 CRELD2Q6UXH1 353 aaPredicted RBP22.38■■□□□ 1.17
COL13A1-208ENST00000479733 BZW1Q7L1Q6 419 aaKnown RBP22.38■■□□□ 1.17
COL13A1-208ENST00000479733 CATSPER3Q86XQ3 398 aa22.38■■□□□ 1.17
COL13A1-208ENST00000479733 ZC3H3Q8IXZ2 948 aaKnown RBP22.38■■□□□ 1.17
COL13A1-208ENST00000479733 MICAL1Q8TDZ2 1067 aa22.38■■□□□ 1.17
COL13A1-208ENST00000479733 ZNF570Q96NI8 536 aa22.38■■□□□ 1.17
COL13A1-208ENST00000479733 KCNK9Q9NPC2 374 aa22.38■■□□□ 1.17
COL13A1-208ENST00000479733 RASAL2Q9UJF2 1139 aa22.38■■□□□ 1.17
COL13A1-208ENST00000479733 TRAF3IP3Q9Y228 551 aa22.38■■□□□ 1.17
COL13A1-208ENST00000479733 CFAP73A6NFT4 308 aa22.37■■□□□ 1.17
COL13A1-208ENST00000479733 LRRN2O75325 713 aa22.37■■□□□ 1.17
COL13A1-208ENST00000479733 AGTP01019 485 aa22.37■■□□□ 1.17
COL13A1-208ENST00000479733 KCNJ1P48048 391 aa22.37■■□□□ 1.17
COL13A1-208ENST00000479733 NPEPPSP55786 919 aa22.37■■□□□ 1.17
COL13A1-208ENST00000479733 PICALMQ13492 652 aa22.37■■□□□ 1.17
COL13A1-208ENST00000479733 KCTD1Q719H9 257 aa22.37■■□□□ 1.17
COL13A1-208ENST00000479733 NBPF5PQ86XG9 351 aaPredicted RBP22.37■■□□□ 1.17
COL13A1-208ENST00000479733 KSR1Q8IVT5 923 aa22.37■■□□□ 1.17
COL13A1-208ENST00000479733 NOP53Q9NZM5 478 aaKnown RBP22.37■■□□□ 1.17
COL13A1-208ENST00000479733 DNAJC12Q9UKB3 198 aa22.37■■□□□ 1.17
COL13A1-208ENST00000479733 USP17L10C9JJH3 530 aa22.37■■□□□ 1.17
COL13A1-208ENST00000479733 HOXA7P31268 230 aaPredicted RBP22.37■■□□□ 1.17
COL13A1-208ENST00000479733 PPATQ06203 517 aa22.37■■□□□ 1.17
COL13A1-208ENST00000479733 ADCY2Q08462 1091 aa22.37■■□□□ 1.17
COL13A1-208ENST00000479733 AUHQ13825 339 aaKnown RBP22.37■■□□□ 1.17
COL13A1-208ENST00000479733 ZNF268Q14587 947 aaPredicted RBP22.37■■□□□ 1.17
COL13A1-208ENST00000479733 ERICH1Q86X53 443 aa22.37■■□□□ 1.17
COL13A1-208ENST00000479733 NAP1L3Q99457 506 aaPredicted RBP22.37■■□□□ 1.17
COL13A1-208ENST00000479733 RTFDC1Q9BY42 306 aaPredicted RBP22.37■■□□□ 1.17
COL13A1-208ENST00000479733 CARD9Q9H257 536 aa22.37■■□□□ 1.17
COL13A1-208ENST00000479733 TTC7AQ9ULT0 858 aaPredicted RBP22.37■■□□□ 1.17
COL13A1-208ENST00000479733 ANKRD63C9JTQ0 380 aa22.37■■□□□ 1.17
COL13A1-208ENST00000479733 ACSL3O95573 720 aa22.37■■□□□ 1.17
COL13A1-208ENST00000479733 SLC8A3P57103 927 aa22.37■■□□□ 1.17
COL13A1-208ENST00000479733 TTC27Q6P3X3 843 aa22.37■■□□□ 1.17
COL13A1-208ENST00000479733 SLC30A5Q8TAD4 765 aa22.37■■□□□ 1.17
COL13A1-208ENST00000479733 KCNV2Q8TDN2 545 aa22.37■■□□□ 1.17
COL13A1-208ENST00000479733 L3MBTL3Q96JM7 780 aaPredicted RBP22.37■■□□□ 1.17
COL13A1-208ENST00000479733 DNAJC17Q9NVM6 304 aaKnown RBP22.37■■□□□ 1.17
COL13A1-208ENST00000479733 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.37■■□□□ 1.17
COL13A1-208ENST00000479733 FAM187AA6NFU0 413 aa22.36■■□□□ 1.17
COL13A1-208ENST00000479733 TNFAIP3P21580 790 aa22.36■■□□□ 1.17
COL13A1-208ENST00000479733 SMARCA1P28370 1054 aa22.36■■□□□ 1.17
COL13A1-208ENST00000479733 SOX5P35711 763 aa22.36■■□□□ 1.17
COL13A1-208ENST00000479733 PDE6CP51160 858 aa22.36■■□□□ 1.17
COL13A1-208ENST00000479733 EXOC3L1Q86VI1 746 aa22.36■■□□□ 1.17
COL13A1-208ENST00000479733 MTRF1LQ9UGC7 380 aaKnown RBP22.36■■□□□ 1.17
COL13A1-208ENST00000479733 INTUQ9ULD6 942 aa22.36■■□□□ 1.17
COL13A1-208ENST00000479733 USP15Q9Y4E8 981 aaPredicted RBP22.36■■□□□ 1.17
COL13A1-208ENST00000479733 ALG6Q9Y672 507 aa22.36■■□□□ 1.17
COL13A1-208ENST00000479733 PNMA6FA0A0J9YX94 578 aa22.36■■□□□ 1.17
COL13A1-208ENST00000479733 UPP2O95045 317 aa22.36■■□□□ 1.17
COL13A1-208ENST00000479733 PPP4CP60510 307 aa22.36■■□□□ 1.17
COL13A1-208ENST00000479733 RIPK1Q13546 671 aa22.36■■□□□ 1.17
COL13A1-208ENST00000479733 HYIQ5T013 277 aa22.36■■□□□ 1.17
COL13A1-208ENST00000479733 COL23A1Q86Y22 540 aaPredicted RBP22.36■■□□□ 1.17
COL13A1-208ENST00000479733 ZDHHC14Q8IZN3 488 aa22.36■■□□□ 1.17
COL13A1-208ENST00000479733 PRELID2Q8N945 189 aa22.36■■□□□ 1.17
COL13A1-208ENST00000479733 FAM167BQ9BTA0 163 aa22.36■■□□□ 1.17
COL13A1-208ENST00000479733 DDX23Q9BUQ8 820 aaKnown RBP22.36■■□□□ 1.17
COL13A1-208ENST00000479733 PHLPP1O60346 1717 aa22.36■■□□□ 1.17
COL13A1-208ENST00000479733 MYH14Q7Z406 1995 aaKnown RBP22.35■■□□□ 1.17
COL13A1-208ENST00000479733 TCRBV7S2A1N4TA0A589 114 aa22.35■■□□□ 1.17
COL13A1-208ENST00000479733 RIPK2O43353 540 aa22.35■■□□□ 1.17
COL13A1-208ENST00000479733 LDHCP07864 332 aa22.35■■□□□ 1.17
COL13A1-208ENST00000479733 TMEM253P0C7T8 217 aa22.35■■□□□ 1.17
COL13A1-208ENST00000479733 LMNB1P20700 586 aa22.35■■□□□ 1.17
COL13A1-208ENST00000479733 SATB1Q01826 763 aa22.35■■□□□ 1.17
COL13A1-208ENST00000479733 DHX34Q14147 1143 aaKnown RBP22.35■■□□□ 1.17
COL13A1-208ENST00000479733 PRR16Q569H4 304 aa22.35■■□□□ 1.17
COL13A1-208ENST00000479733 DPP8Q6V1X1 898 aaPredicted RBP22.35■■□□□ 1.17
COL13A1-208ENST00000479733 CCDC105Q8IYK2 499 aa22.35■■□□□ 1.17
COL13A1-208ENST00000479733 MAB21L3Q8N8X9 362 aa22.35■■□□□ 1.17
COL13A1-208ENST00000479733 POP1Q99575 1024 aaKnown RBP22.35■■□□□ 1.17
COL13A1-208ENST00000479733 MTMR4Q9NYA4 1195 aa22.35■■□□□ 1.17
COL13A1-208ENST00000479733 SRP68Q9UHB9 627 aaKnown RBP22.35■■□□□ 1.17
COL13A1-208ENST00000479733 ASTN1O14525 1302 aa22.35■■□□□ 1.17
COL13A1-208ENST00000479733 AKR1B1P15121 316 aa22.35■■□□□ 1.17
COL13A1-208ENST00000479733 CCDC137Q6PK04 289 aaKnown RBP22.35■■□□□ 1.17
COL13A1-208ENST00000479733 ZNF622Q969S3 477 aaKnown RBP eCLIP22.35■■□□□ 1.17
COL13A1-208ENST00000479733 CTTNBP2NLQ9P2B4 639 aa22.35■■□□□ 1.17
COL13A1-208ENST00000479733 DNM3Q9UQ16 869 aa22.35■■□□□ 1.17
COL13A1-208ENST00000479733 PPP1R12AO14974 1030 aaPredicted RBP22.34■■□□□ 1.17
COL13A1-208ENST00000479733 VCAM1P19320 739 aa22.34■■□□□ 1.17
COL13A1-208ENST00000479733 PTGIRP43119 386 aa22.34■■□□□ 1.17
COL13A1-208ENST00000479733 SPDYCQ5MJ68 293 aa22.34■■□□□ 1.17
COL13A1-208ENST00000479733 CLEC4GQ6UXB4 293 aa22.34■■□□□ 1.17
COL13A1-208ENST00000479733 OLIG1Q8TAK6 271 aa22.34■■□□□ 1.17
COL13A1-208ENST00000479733 KCNMB3Q9NPA1 279 aa22.34■■□□□ 1.17
COL13A1-208ENST00000479733 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.34■■□□□ 1.17
COL13A1-208ENST00000479733 TMEM120BA0PK00 339 aa22.34■■□□□ 1.17
COL13A1-208ENST00000479733 PDXKO00764 312 aa22.34■■□□□ 1.17
COL13A1-208ENST00000479733 TRIM49P0CI25 452 aa22.34■■□□□ 1.17
COL13A1-208ENST00000479733 TRIM49CP0CI26 452 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms