RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 PCNTO95613 3336 aa12.33□□□□□ -0.44
APTX-223ENST00000479656 DENND3A2RUS2 1198 aa12.33□□□□□ -0.44
APTX-223ENST00000479656 MYADML2A6NDP7 307 aa12.33□□□□□ -0.44
APTX-223ENST00000479656 C6orf222P0C671 652 aaPredicted RBP12.33□□□□□ -0.44
APTX-223ENST00000479656 PRKAR2AP13861 404 aaKnown RBP12.33□□□□□ -0.44
APTX-223ENST00000479656 HSPA6P17066 643 aa12.33□□□□□ -0.44
APTX-223ENST00000479656 EEF1GP26641 437 aaKnown RBP12.33□□□□□ -0.44
APTX-223ENST00000479656 CDC25BP30305 580 aa12.33□□□□□ -0.44
APTX-223ENST00000479656 COPB1P53618 953 aaKnown RBP12.33□□□□□ -0.44
APTX-223ENST00000479656 MAP2K1Q02750 393 aaPredicted RBP12.33□□□□□ -0.44
APTX-223ENST00000479656 FSCN1Q16658 493 aaKnown RBP12.33□□□□□ -0.44
APTX-223ENST00000479656 EDRF1Q3B7T1 1238 aa12.33□□□□□ -0.44
APTX-223ENST00000479656 BRDTQ58F21 947 aaPredicted RBP12.33□□□□□ -0.44
APTX-223ENST00000479656 FILIP1Q7Z7B0 1213 aa12.33□□□□□ -0.44
APTX-223ENST00000479656 FAM114A1Q8IWE2 563 aa12.33□□□□□ -0.44
APTX-223ENST00000479656 METTL13Q8N6R0 699 aa12.33□□□□□ -0.44
APTX-223ENST00000479656 SLC17A8Q8NDX2 589 aa12.33□□□□□ -0.44
APTX-223ENST00000479656 KAT2BQ92831 832 aa12.33□□□□□ -0.44
APTX-223ENST00000479656 CTAGE1Q96RT6 745 aa12.33□□□□□ -0.44
APTX-223ENST00000479656 BEGAINQ9BUH8 593 aa12.33□□□□□ -0.44
APTX-223ENST00000479656 GBP3Q9H0R5 595 aa12.33□□□□□ -0.44
APTX-223ENST00000479656 TMEM206Q9H813 350 aa12.33□□□□□ -0.44
APTX-223ENST00000479656 INTS13Q9NVM9 706 aa12.33□□□□□ -0.44
APTX-223ENST00000479656 TBX20Q9UMR3 447 aa12.33□□□□□ -0.44
APTX-223ENST00000479656 UBE4BO95155 1302 aa12.33□□□□□ -0.44
APTX-223ENST00000479656 ADGRA3Q8IWK6 1321 aa12.33□□□□□ -0.44
APTX-223ENST00000479656 THSD7BQ9C0I4 1608 aa12.32□□□□□ -0.44
APTX-223ENST00000479656 A0A1B0GTH6 734 aa12.32□□□□□ -0.44
APTX-223ENST00000479656 CETN3O15182 167 aa12.32□□□□□ -0.44
APTX-223ENST00000479656 TEX33O43247 280 aa12.32□□□□□ -0.44
APTX-223ENST00000479656 C22orf31O95567 290 aa12.32□□□□□ -0.44
APTX-223ENST00000479656 PGK1P00558 417 aa12.32□□□□□ -0.44
APTX-223ENST00000479656 NR2F2P24468 414 aa12.32□□□□□ -0.44
APTX-223ENST00000479656 NAMPTP43490 491 aa12.32□□□□□ -0.44
APTX-223ENST00000479656 GJA9P57773 515 aa12.32□□□□□ -0.44
APTX-223ENST00000479656 ARHGEF6Q15052 776 aa12.32□□□□□ -0.44
APTX-223ENST00000479656 KIAA0753Q2KHM9 967 aa12.32□□□□□ -0.44
APTX-223ENST00000479656 FILIP1LQ4L180 1135 aa12.32□□□□□ -0.44
APTX-223ENST00000479656 TCP11Q8WWU5 503 aa12.32□□□□□ -0.44
APTX-223ENST00000479656 CEP63Q96MT8 703 aa12.32□□□□□ -0.44
APTX-223ENST00000479656 JPH2Q9BR39 696 aaPredicted RBP12.32□□□□□ -0.44
APTX-223ENST00000479656 TUBGCP2Q9BSJ2 902 aa12.32□□□□□ -0.44
APTX-223ENST00000479656 RTN4Q9NQC3 1192 aaKnown RBP12.32□□□□□ -0.44
APTX-223ENST00000479656 SETD4Q9NVD3 440 aa12.32□□□□□ -0.44
APTX-223ENST00000479656 SUCLA2Q9P2R7 463 aaPredicted RBP12.32□□□□□ -0.44
APTX-223ENST00000479656 KCNG1Q9UIX4 513 aa12.32□□□□□ -0.44
APTX-223ENST00000479656 LRRIQ4A6NIV6 560 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 TISP43B9A030 160 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 N4BP3O15049 544 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 GAS2O43903 313 aaKnown RBP12.31□□□□□ -0.44
APTX-223ENST00000479656 F2P00734 622 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 HMGCRP04035 888 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 NR3C1P04150 777 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 PTMAP06454 111 aaKnown RBP12.31□□□□□ -0.44
APTX-223ENST00000479656 GJB1P08034 283 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 RARBP10826 455 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 MTIF2P46199 727 aaKnown RBP12.31□□□□□ -0.44
APTX-223ENST00000479656 CLCN3P51790 818 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 PPFIA1Q13136 1202 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 CAPSQ13938 189 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 PPP2R5AQ15172 486 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 GRIK4Q16099 956 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 GNASQ5JWF2 1037 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 HS2ST1Q7LGA3 356 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 ZC3H3Q8IXZ2 948 aaKnown RBP12.31□□□□□ -0.44
APTX-223ENST00000479656 DEPTORQ8TB45 409 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 PXYLP1Q8TE99 480 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 AGPAT3Q9NRZ7 376 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 ARHGAP28Q9P2N2 729 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 COL1A2P08123 1366 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 MAGEB2O15479 319 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 TPM3P06753 285 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 SRGAP2CP0DJJ0 459 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 RPL13P26373 211 aaKnown RBP12.31□□□□□ -0.44
APTX-223ENST00000479656 PSEN2P49810 448 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 DNM2P50570 870 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 C1QTNF8P60827 252 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 LAMTOR4Q0VGL1 99 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 MFSD10Q14728 455 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 MARCH8Q5T0T0 291 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 MTHFD1LQ6UB35 978 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 TAS1R3Q7RTX0 852 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 RHPN2Q8IUC4 686 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 RETREG2Q8NC44 543 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 PSPC1Q8WXF1 523 aaKnown RBP12.31□□□□□ -0.44
APTX-223ENST00000479656 ZNF668Q96K58 619 aaPredicted RBP12.31□□□□□ -0.44
APTX-223ENST00000479656 TRIM17Q9Y577 477 aa12.31□□□□□ -0.44
APTX-223ENST00000479656 ANKRD63C9JTQ0 380 aa12.3□□□□□ -0.44
APTX-223ENST00000479656 K7ERI5 159 aa12.3□□□□□ -0.44
APTX-223ENST00000479656 HAS3O00219 553 aa12.3□□□□□ -0.44
APTX-223ENST00000479656 PES1O00541 588 aaKnown RBP12.3□□□□□ -0.44
APTX-223ENST00000479656 SMIM10L2AP0DMW4 78 aa12.3□□□□□ -0.44
APTX-223ENST00000479656 SMIM10L2BP0DMW5 78 aa12.3□□□□□ -0.44
APTX-223ENST00000479656 CASP4P49662 377 aa12.3□□□□□ -0.44
APTX-223ENST00000479656 PURAQ00577 322 aaKnown RBP12.3□□□□□ -0.44
APTX-223ENST00000479656 MXD4Q14582 209 aaPredicted RBP12.3□□□□□ -0.44
APTX-223ENST00000479656 CCDC40Q4G0X9 1142 aa12.3□□□□□ -0.44
APTX-223ENST00000479656 MAP3K21Q5TCX8 1036 aa12.3□□□□□ -0.44
APTX-223ENST00000479656 CEP135Q66GS9 1140 aa12.3□□□□□ -0.44
APTX-223ENST00000479656 TMC6Q7Z403 805 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms