RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 KYQ8NBH2 561 aa6.91□□□□□ -1.3
CCDC171-207ENST00000478913 HIPK4Q8NE63 616 aa6.91□□□□□ -1.3
CCDC171-207ENST00000478913 ZCRB1Q8TBF4 217 aaKnown RBP6.91□□□□□ -1.3
CCDC171-207ENST00000478913 ZSWIM3Q96MP5 696 aa6.91□□□□□ -1.3
CCDC171-207ENST00000478913 PWWP2AQ96N64 755 aa6.91□□□□□ -1.3
CCDC171-207ENST00000478913 GBP4Q96PP9 640 aa6.91□□□□□ -1.3
CCDC171-207ENST00000478913 IFT22Q9H7X7 185 aa6.91□□□□□ -1.3
CCDC171-207ENST00000478913 DLL4Q9NR61 685 aa6.91□□□□□ -1.3
CCDC171-207ENST00000478913 TOMM22Q9NS69 142 aa6.91□□□□□ -1.3
CCDC171-207ENST00000478913 SPO11Q9Y5K1 396 aa6.91□□□□□ -1.3
CCDC171-207ENST00000478913 CNTNAP1P78357 1384 aa6.91□□□□□ -1.3
CCDC171-207ENST00000478913 ZNF839A8K0R7 811 aa6.9□□□□□ -1.3
CCDC171-207ENST00000478913 CYP17A1P05093 508 aa6.9□□□□□ -1.3
CCDC171-207ENST00000478913 NCLP19338 710 aaKnown RBP6.9□□□□□ -1.3
CCDC171-207ENST00000478913 PFKPQ01813 784 aa6.9□□□□□ -1.3
CCDC171-207ENST00000478913 ADAM9Q13443 819 aa6.9□□□□□ -1.3
CCDC171-207ENST00000478913 SMAD4Q13485 552 aaKnown RBP6.9□□□□□ -1.3
CCDC171-207ENST00000478913 PTPROQ16827 1216 aa6.9□□□□□ -1.3
CCDC171-207ENST00000478913 TXNRD1Q16881 649 aa6.9□□□□□ -1.3
CCDC171-207ENST00000478913 SKIDA1Q1XH10 827 aa6.9□□□□□ -1.3
CCDC171-207ENST00000478913 CATSPEREQ5SY80 951 aa6.9□□□□□ -1.3
CCDC171-207ENST00000478913 TTLL6Q8N841 843 aa6.9□□□□□ -1.3
CCDC171-207ENST00000478913 FNIP1Q8TF40 1166 aa6.9□□□□□ -1.3
CCDC171-207ENST00000478913 ASB15Q8WXK1 588 aa6.9□□□□□ -1.3
CCDC171-207ENST00000478913 ERCC4Q92889 916 aaPredicted RBP6.9□□□□□ -1.3
CCDC171-207ENST00000478913 CLIC6Q96NY7 704 aa6.9□□□□□ -1.3
CCDC171-207ENST00000478913 WRNIP1Q96S55 665 aa6.9□□□□□ -1.3
CCDC171-207ENST00000478913 ELF4Q99607 663 aaPredicted RBP6.9□□□□□ -1.3
CCDC171-207ENST00000478913 EPB41L4AQ9HCS5 686 aaPredicted RBP6.9□□□□□ -1.3
CCDC171-207ENST00000478913 SLC39A2Q9NP94 309 aa6.9□□□□□ -1.3
CCDC171-207ENST00000478913 SPTLC3Q9NUV7 552 aa6.9□□□□□ -1.3
CCDC171-207ENST00000478913 WASF3Q9UPY6 502 aa6.9□□□□□ -1.3
CCDC171-207ENST00000478913 APOBEC2Q9Y235 224 aaKnown RBP6.9□□□□□ -1.3
CCDC171-207ENST00000478913 COL4A3BPQ9Y5P4 624 aa6.9□□□□□ -1.3
CCDC171-207ENST00000478913 C1orf167Q5SNV9 1468 aa6.9□□□□□ -1.31
CCDC171-207ENST00000478913 CICQ96RK0 1608 aaPredicted RBP6.9□□□□□ -1.31
CCDC171-207ENST00000478913 RASSF10A6NK89 507 aa6.89□□□□□ -1.31
CCDC171-207ENST00000478913 NEMP1O14524 444 aa6.89□□□□□ -1.31
CCDC171-207ENST00000478913 ZEB2O60315 1214 aa6.89□□□□□ -1.31
CCDC171-207ENST00000478913 BRINP1O60477 761 aa6.89□□□□□ -1.31
CCDC171-207ENST00000478913 BPIP17213 487 aa6.89□□□□□ -1.31
CCDC171-207ENST00000478913 PTGS1P23219 599 aa6.89□□□□□ -1.31
CCDC171-207ENST00000478913 MC4RP32245 332 aa6.89□□□□□ -1.31
CCDC171-207ENST00000478913 FNTBP49356 437 aa6.89□□□□□ -1.31
CCDC171-207ENST00000478913 ATP13A4Q4VNC1 1196 aa6.89□□□□□ -1.31
CCDC171-207ENST00000478913 LINC00482Q8N8I6 264 aa6.89□□□□□ -1.31
CCDC171-207ENST00000478913 DTX3Q8N9I9 347 aa6.89□□□□□ -1.31
CCDC171-207ENST00000478913 ATL2Q8NHH9 583 aa6.89□□□□□ -1.31
CCDC171-207ENST00000478913 IGDCC4Q8TDY8 1250 aa6.89□□□□□ -1.31
CCDC171-207ENST00000478913 SCYL1Q96KG9 808 aa6.89□□□□□ -1.31
CCDC171-207ENST00000478913 FAM126AQ9BYI3 521 aaPredicted RBP6.89□□□□□ -1.31
CCDC171-207ENST00000478913 ARHGAP20Q9P2F6 1191 aa6.89□□□□□ -1.31
CCDC171-207ENST00000478913 MCM8Q9UJA3 840 aa6.89□□□□□ -1.31
CCDC171-207ENST00000478913 ASB1Q9Y576 335 aa6.89□□□□□ -1.31
CCDC171-207ENST00000478913 MARF1Q9Y4F3 1742 aaKnown RBP6.89□□□□□ -1.31
CCDC171-207ENST00000478913 PKD1L2Q7Z442 2459 aa6.88□□□□□ -1.31
CCDC171-207ENST00000478913 CROCC2H7BZ55 1655 aa6.88□□□□□ -1.31
CCDC171-207ENST00000478913 NUAK1O60285 661 aa6.88□□□□□ -1.31
CCDC171-207ENST00000478913 IBSPP21815 317 aaPredicted RBP6.88□□□□□ -1.31
CCDC171-207ENST00000478913 PTX3P26022 381 aaPredicted RBP6.88□□□□□ -1.31
CCDC171-207ENST00000478913 MAP2K1Q02750 393 aaPredicted RBP6.88□□□□□ -1.31
CCDC171-207ENST00000478913 E2F7Q96AV8 911 aa6.88□□□□□ -1.31
CCDC171-207ENST00000478913 EMC7Q9NPA0 242 aa6.88□□□□□ -1.31
CCDC171-207ENST00000478913 INCENPQ9NQS7 918 aa6.88□□□□□ -1.31
CCDC171-207ENST00000478913 UCKL1Q9NWZ5 548 aa6.88□□□□□ -1.31
CCDC171-207ENST00000478913 BTBD7Q9P203 1132 aa6.88□□□□□ -1.31
CCDC171-207ENST00000478913 CROTQ9UKG9 612 aa6.88□□□□□ -1.31
CCDC171-207ENST00000478913 CACNA1GO43497 2377 aa6.88□□□□□ -1.31
CCDC171-207ENST00000478913 RPRD2Q5VT52 1461 aaKnown RBP6.87□□□□□ -1.31
CCDC171-207ENST00000478913 NOS1P29475 1434 aa6.87□□□□□ -1.31
CCDC171-207ENST00000478913 DHX29Q7Z478 1369 aaKnown RBP6.87□□□□□ -1.31
CCDC171-207ENST00000478913 PRAMEF22A3QJZ6 481 aa6.87□□□□□ -1.31
CCDC171-207ENST00000478913 CYP7B1O75881 506 aa6.87□□□□□ -1.31
CCDC171-207ENST00000478913 THBS2P35442 1172 aa6.87□□□□□ -1.31
CCDC171-207ENST00000478913 ID4P47928 161 aa6.87□□□□□ -1.31
CCDC171-207ENST00000478913 GLRBP48167 497 aa6.87□□□□□ -1.31
CCDC171-207ENST00000478913 AFF3P51826 1226 aaKnown RBP6.87□□□□□ -1.31
CCDC171-207ENST00000478913 STAT4Q14765 748 aa6.87□□□□□ -1.31
CCDC171-207ENST00000478913 PHF19Q5T6S3 580 aa6.87□□□□□ -1.31
CCDC171-207ENST00000478913 PRAMEF18Q5VWM3 479 aa6.87□□□□□ -1.31
CCDC171-207ENST00000478913 CIAPIN1Q6FI81 312 aa6.87□□□□□ -1.31
CCDC171-207ENST00000478913 ZZZ3Q8IYH5 903 aa6.87□□□□□ -1.31
CCDC171-207ENST00000478913 PCDH12Q9NPG4 1184 aa6.87□□□□□ -1.31
CCDC171-207ENST00000478913 ZFP69BQ9UJL9 534 aa6.87□□□□□ -1.31
CCDC171-207ENST00000478913 ATP8A1Q9Y2Q0 1164 aa6.87□□□□□ -1.31
CCDC171-207ENST00000478913 NPHP3Q7Z494 1330 aa6.86□□□□□ -1.31
CCDC171-207ENST00000478913 CHD2O14647 1828 aaKnown RBP6.86□□□□□ -1.31
CCDC171-207ENST00000478913 TGM5O43548 720 aa6.86□□□□□ -1.31
CCDC171-207ENST00000478913 FBXO21O94952 628 aa6.86□□□□□ -1.31
CCDC171-207ENST00000478913 EYA4O95677 639 aa6.86□□□□□ -1.31
CCDC171-207ENST00000478913 POU3F3P20264 500 aaPredicted RBP6.86□□□□□ -1.31
CCDC171-207ENST00000478913 TMPRSS15P98073 1019 aa6.86□□□□□ -1.31
CCDC171-207ENST00000478913 AMPD3Q01432 767 aa6.86□□□□□ -1.31
CCDC171-207ENST00000478913 IDI1Q13907 227 aa6.86□□□□□ -1.31
CCDC171-207ENST00000478913 EPHA7Q15375 998 aa6.86□□□□□ -1.31
CCDC171-207ENST00000478913 DDB1Q16531 1140 aa6.86□□□□□ -1.31
CCDC171-207ENST00000478913 ESRP1Q6NXG1 681 aaKnown RBP6.86□□□□□ -1.31
CCDC171-207ENST00000478913 TTLL7Q6ZT98 887 aa6.86□□□□□ -1.31
CCDC171-207ENST00000478913 SAPCD2Q86UD0 394 aa6.86□□□□□ -1.31
CCDC171-207ENST00000478913 DDX42Q86XP3 938 aaKnown RBP eCLIP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms