RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 TBX3O15119 743 aa25.58■■□□□ 1.69
C9orf3-216ENST00000478603 JAK2O60674 1132 aa25.58■■□□□ 1.69
C9orf3-216ENST00000478603 P4HBP07237 508 aaKnown RBP25.58■■□□□ 1.69
C9orf3-216ENST00000478603 ATF7P17544 494 aaPredicted RBP25.58■■□□□ 1.69
C9orf3-216ENST00000478603 PBX3P40426 434 aa25.58■■□□□ 1.69
C9orf3-216ENST00000478603 ERVFC1P60507 584 aa25.58■■□□□ 1.69
C9orf3-216ENST00000478603 UBE3AQ05086 875 aa25.58■■□□□ 1.69
C9orf3-216ENST00000478603 ZP2Q05996 745 aa25.58■■□□□ 1.69
C9orf3-216ENST00000478603 NCAPH2Q6IBW4 605 aa25.58■■□□□ 1.69
C9orf3-216ENST00000478603 ZNF598Q86UK7 904 aaKnown RBP25.58■■□□□ 1.69
C9orf3-216ENST00000478603 EFHBQ8N7U6 833 aa25.58■■□□□ 1.69
C9orf3-216ENST00000478603 NLRP4Q96MN2 994 aa25.58■■□□□ 1.69
C9orf3-216ENST00000478603 NAP1L4Q99733 375 aaKnown RBP25.58■■□□□ 1.69
C9orf3-216ENST00000478603 C11orf16Q9NQ32 467 aa25.58■■□□□ 1.69
C9orf3-216ENST00000478603 CD207Q9UJ71 328 aa25.58■■□□□ 1.69
C9orf3-216ENST00000478603 ARID2Q68CP9 1835 aa25.58■■□□□ 1.68
C9orf3-216ENST00000478603 C5orf42Q9H799 3197 aa25.58■■□□□ 1.68
C9orf3-216ENST00000478603 PER2O15055 1255 aa25.57■■□□□ 1.68
C9orf3-216ENST00000478603 CDC42EP1Q00587 391 aa25.57■■□□□ 1.68
C9orf3-216ENST00000478603 EPHA7Q15375 998 aa25.57■■□□□ 1.68
C9orf3-216ENST00000478603 SMAD2Q15796 467 aaKnown RBP25.57■■□□□ 1.68
C9orf3-216ENST00000478603 LRRC43Q8N309 656 aa25.57■■□□□ 1.68
C9orf3-216ENST00000478603 HELQQ8TDG4 1101 aa25.57■■□□□ 1.68
C9orf3-216ENST00000478603 CEP170P1Q96L14 293 aa25.57■■□□□ 1.68
C9orf3-216ENST00000478603 LXNQ9BS40 222 aa25.57■■□□□ 1.68
C9orf3-216ENST00000478603 TLE6Q9H808 572 aa25.57■■□□□ 1.68
C9orf3-216ENST00000478603 BMP2KQ9NSY1 1161 aaPredicted RBP25.57■■□□□ 1.68
C9orf3-216ENST00000478603 DACT1Q9NYF0 836 aa25.57■■□□□ 1.68
C9orf3-216ENST00000478603 RGL1Q9NZL6 768 aa25.57■■□□□ 1.68
C9orf3-216ENST00000478603 CLEC1BQ9P126 229 aa25.57■■□□□ 1.68
C9orf3-216ENST00000478603 GLP2RO95838 553 aa25.56■■□□□ 1.68
C9orf3-216ENST00000478603 SFPQP23246 707 aaKnown RBP eCLIP25.56■■□□□ 1.68
C9orf3-216ENST00000478603 SPIRE1Q08AE8 756 aa25.56■■□□□ 1.68
C9orf3-216ENST00000478603 SMAD4Q13485 552 aaKnown RBP25.56■■□□□ 1.68
C9orf3-216ENST00000478603 CSPP1Q1MSJ5 1256 aa25.56■■□□□ 1.68
C9orf3-216ENST00000478603 TMEM31Q5JXX7 168 aa25.56■■□□□ 1.68
C9orf3-216ENST00000478603 KCNT2Q6UVM3 1135 aa25.56■■□□□ 1.68
C9orf3-216ENST00000478603 ZNF410Q86VK4 478 aa25.56■■□□□ 1.68
C9orf3-216ENST00000478603 ADHFE1Q8IWW8 467 aa25.56■■□□□ 1.68
C9orf3-216ENST00000478603 DYDC2Q96IM9 177 aa25.56■■□□□ 1.68
C9orf3-216ENST00000478603 MSLNLQ96KJ4 702 aa25.56■■□□□ 1.68
C9orf3-216ENST00000478603 BRMS1Q9HCU9 246 aa25.56■■□□□ 1.68
C9orf3-216ENST00000478603 PRKAG3Q9UGI9 489 aa25.56■■□□□ 1.68
C9orf3-216ENST00000478603 BARX2Q9UMQ3 279 aaPredicted RBP25.56■■□□□ 1.68
C9orf3-216ENST00000478603 DKC1O60832 514 aaKnown RBP eCLIP25.55■■□□□ 1.682e-9■□□□□ 11.2
C9orf3-216ENST00000478603 EOMESO95936 686 aa25.55■■□□□ 1.68
C9orf3-216ENST00000478603 RBM10P98175 930 aaKnown RBP25.55■■□□□ 1.68
C9orf3-216ENST00000478603 CYP4A11Q02928 519 aa25.55■■□□□ 1.68
C9orf3-216ENST00000478603 ST3GAL1Q11201 340 aa25.55■■□□□ 1.68
C9orf3-216ENST00000478603 CTTNQ14247 550 aaKnown RBP25.55■■□□□ 1.68
C9orf3-216ENST00000478603 LONRF3Q496Y0 759 aa25.55■■□□□ 1.68
C9orf3-216ENST00000478603 MRPS27Q92552 414 aaKnown RBP25.55■■□□□ 1.68
C9orf3-216ENST00000478603 TMEM143Q96AN5 459 aa25.55■■□□□ 1.68
C9orf3-216ENST00000478603 ZNF558Q96NG5 402 aa25.55■■□□□ 1.68
C9orf3-216ENST00000478603 JPH2Q9BR39 696 aaPredicted RBP25.55■■□□□ 1.68
C9orf3-216ENST00000478603 CHST12Q9NRB3 414 aa25.55■■□□□ 1.68
C9orf3-216ENST00000478603 PIN4Q9Y237 131 aaKnown RBP25.55■■□□□ 1.68
C9orf3-216ENST00000478603 BTBD18B2RXH4 712 aa25.54■■□□□ 1.68
C9orf3-216ENST00000478603 WNT7AO00755 349 aa25.54■■□□□ 1.68
C9orf3-216ENST00000478603 FSCN2O14926 492 aa25.54■■□□□ 1.68
C9orf3-216ENST00000478603 ZBTB39O15060 712 aa25.54■■□□□ 1.68
C9orf3-216ENST00000478603 BAG4O95429 457 aaKnown RBP25.54■■□□□ 1.68
C9orf3-216ENST00000478603 YWHABP31946 246 aaKnown RBP25.54■■□□□ 1.68
C9orf3-216ENST00000478603 PHKA2P46019 1235 aa25.54■■□□□ 1.68
C9orf3-216ENST00000478603 POLGP54098 1239 aaPredicted RBP25.54■■□□□ 1.68
C9orf3-216ENST00000478603 PLPP4Q5VZY2 271 aa25.54■■□□□ 1.68
C9orf3-216ENST00000478603 TWF2Q6IBS0 349 aaKnown RBP25.54■■□□□ 1.68
C9orf3-216ENST00000478603 C4orf19Q8IY42 314 aa25.54■■□□□ 1.68
C9orf3-216ENST00000478603 SLFN12Q8IYM2 578 aa25.54■■□□□ 1.68
C9orf3-216ENST00000478603 SLC7A3Q8WY07 619 aa25.54■■□□□ 1.68
C9orf3-216ENST00000478603 LPPQ93052 612 aa25.54■■□□□ 1.68
C9orf3-216ENST00000478603 INO80BQ9C086 356 aaPredicted RBP25.54■■□□□ 1.68
C9orf3-216ENST00000478603 DHX33Q9H6R0 707 aaKnown RBP25.54■■□□□ 1.68
C9orf3-216ENST00000478603 COL4A3BPQ9Y5P4 624 aa25.54■■□□□ 1.68
C9orf3-216ENST00000478603 C19orf67A6NJJ6 358 aa25.53■■□□□ 1.68
C9orf3-216ENST00000478603 PLCB3Q01970 1234 aa25.53■■□□□ 1.68
C9orf3-216ENST00000478603 CATSPER4Q7RTX7 472 aa25.53■■□□□ 1.68
C9orf3-216ENST00000478603 DIS3L2Q8IYB7 885 aaKnown RBP25.53■■□□□ 1.68
C9orf3-216ENST00000478603 IFT122Q9HBG6 1241 aa25.53■■□□□ 1.68
C9orf3-216ENST00000478603 LZTS1Q9Y250 596 aa25.53■■□□□ 1.68
C9orf3-216ENST00000478603 GPR37L1O60883 481 aa25.52■■□□□ 1.68
C9orf3-216ENST00000478603 DUSP6Q16828 381 aa25.52■■□□□ 1.68
C9orf3-216ENST00000478603 TPH2Q8IWU9 490 aa25.52■■□□□ 1.68
C9orf3-216ENST00000478603 VN1R2Q8NFZ6 395 aa25.52■■□□□ 1.68
C9orf3-216ENST00000478603 PRPF31Q8WWY3 499 aaKnown RBP25.52■■□□□ 1.68
C9orf3-216ENST00000478603 TCF25Q9BQ70 676 aa25.52■■□□□ 1.68
C9orf3-216ENST00000478603 PUF60Q9UHX1 559 aaKnown RBP25.52■■□□□ 1.68
C9orf3-216ENST00000478603 MEIS3P2A8K0S8 358 aa25.51■■□□□ 1.67
C9orf3-216ENST00000478603 EYA4O95677 639 aa25.51■■□□□ 1.67
C9orf3-216ENST00000478603 SRGAP2CP0DJJ0 459 aa25.51■■□□□ 1.67
C9orf3-216ENST00000478603 RFC5P40937 340 aa25.51■■□□□ 1.67
C9orf3-216ENST00000478603 COASYQ13057 564 aa25.51■■□□□ 1.67
C9orf3-216ENST00000478603 CALCRLQ16602 461 aa25.51■■□□□ 1.67
C9orf3-216ENST00000478603 XKR9Q5GH70 373 aa25.51■■□□□ 1.67
C9orf3-216ENST00000478603 SMRP1Q8NCR6 262 aa25.51■■□□□ 1.67
C9orf3-216ENST00000478603 PSPC1Q8WXF1 523 aaKnown RBP25.51■■□□□ 1.67
C9orf3-216ENST00000478603 ZSWIM4Q9H7M6 989 aa25.51■■□□□ 1.67
C9orf3-216ENST00000478603 ENTPD7Q9NQZ7 604 aa25.51■■□□□ 1.67
C9orf3-216ENST00000478603 FAM105AQ9NUU6 356 aa25.51■■□□□ 1.67
C9orf3-216ENST00000478603 SPG21Q9NZD8 308 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms