RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.27■□□□□ 0.04
NPHP4-208ENST00000478423 KCTD6Q8NC69 237 aa15.27■□□□□ 0.04
NPHP4-208ENST00000478423 AGBL1Q96MI9 1066 aa15.27■□□□□ 0.04
NPHP4-208ENST00000478423 ZDHHC15Q96MV8 337 aa15.27■□□□□ 0.04
NPHP4-208ENST00000478423 TOPORSQ9NS56 1045 aaPredicted RBP15.27■□□□□ 0.04
NPHP4-208ENST00000478423 AGPAT5Q9NUQ2 364 aa15.27■□□□□ 0.04
NPHP4-208ENST00000478423 KLHL14Q9P2G3 628 aa15.27■□□□□ 0.04
NPHP4-208ENST00000478423 C19orf81C9J6K1 198 aa15.27■□□□□ 0.04
NPHP4-208ENST00000478423 TOB1P50616 345 aaPredicted RBP15.27■□□□□ 0.04
NPHP4-208ENST00000478423 NFRKBQ6P4R8 1299 aa15.27■□□□□ 0.04
NPHP4-208ENST00000478423 METTL23Q86XA0 190 aa15.27■□□□□ 0.04
NPHP4-208ENST00000478423 ARHGEF2Q92974 986 aaKnown RBP15.27■□□□□ 0.04
NPHP4-208ENST00000478423 MMP19Q99542 508 aa15.27■□□□□ 0.04
NPHP4-208ENST00000478423 CDO1Q16878 200 aa15.27■□□□□ 0.03
NPHP4-208ENST00000478423 PDXDC1Q6P996 788 aa15.27■□□□□ 0.03
NPHP4-208ENST00000478423 FBXL13Q8NEE6 735 aa15.27■□□□□ 0.03
NPHP4-208ENST00000478423 RBAKQ9NYW8 714 aaPredicted RBP15.27■□□□□ 0.03
NPHP4-208ENST00000478423 AGO2Q9UKV8 859 aaKnown RBP15.27■□□□□ 0.03
NPHP4-208ENST00000478423 FER1L4A9Z1Z3 1794 aa15.27■□□□□ 0.03
NPHP4-208ENST00000478423 NCK2O43639 380 aa15.27■□□□□ 0.03
NPHP4-208ENST00000478423 INHBAP08476 426 aa15.27■□□□□ 0.03
NPHP4-208ENST00000478423 WHAMMQ8TF30 809 aa15.27■□□□□ 0.03
NPHP4-208ENST00000478423 DGAT1O75907 488 aa15.26■□□□□ 0.03
NPHP4-208ENST00000478423 ZNF18P17022 549 aa15.26■□□□□ 0.03
NPHP4-208ENST00000478423 ARHGEF6Q15052 776 aa15.26■□□□□ 0.03
NPHP4-208ENST00000478423 EMBQ6PCB8 327 aa15.26■□□□□ 0.03
NPHP4-208ENST00000478423 ARMCX2Q7L311 632 aa15.26■□□□□ 0.03
NPHP4-208ENST00000478423 SIX6OS1Q8N1H7 587 aa15.26■□□□□ 0.03
NPHP4-208ENST00000478423 PPFIBP2Q8ND30 876 aa15.26■□□□□ 0.03
NPHP4-208ENST00000478423 AGBL3Q8NEM8 1001 aa15.26■□□□□ 0.03
NPHP4-208ENST00000478423 GGPS1O95749 300 aa15.26■□□□□ 0.03
NPHP4-208ENST00000478423 ECE1P42892 770 aa15.26■□□□□ 0.03
NPHP4-208ENST00000478423 FXR2P51116 673 aaKnown RBP eCLIP15.26■□□□□ 0.03
NPHP4-208ENST00000478423 XKR3Q5GH77 459 aa15.26■□□□□ 0.03
NPHP4-208ENST00000478423 FASTKD5Q7L8L6 764 aaKnown RBP15.26■□□□□ 0.03
NPHP4-208ENST00000478423 GPATCH11Q8N954 259 aa15.26■□□□□ 0.03
NPHP4-208ENST00000478423 MRPL4Q9BYD3 311 aaKnown RBP15.26■□□□□ 0.03
NPHP4-208ENST00000478423 EPC1Q9H2F5 836 aa15.26■□□□□ 0.03
NPHP4-208ENST00000478423 LMBRD2Q68DH5 695 aaPredicted RBP15.26■□□□□ 0.03
NPHP4-208ENST00000478423 TWF2Q6IBS0 349 aaKnown RBP15.26■□□□□ 0.03
NPHP4-208ENST00000478423 RNF149Q8NC42 400 aa15.26■□□□□ 0.03
NPHP4-208ENST00000478423 OSBPL9Q96SU4 736 aa15.26■□□□□ 0.03
NPHP4-208ENST00000478423 C2orf40Q9H1Z8 148 aa15.26■□□□□ 0.03
NPHP4-208ENST00000478423 DNAJC17Q9NVM6 304 aaKnown RBP15.26■□□□□ 0.03
NPHP4-208ENST00000478423 KDM4FA0A1W2PPD8 638 aa15.25■□□□□ 0.03
NPHP4-208ENST00000478423 SLC37A4O43826 429 aa15.25■□□□□ 0.03
NPHP4-208ENST00000478423 TXNP10599 105 aaKnown RBP15.25■□□□□ 0.03
NPHP4-208ENST00000478423 SAT1P21673 171 aa15.25■□□□□ 0.03
NPHP4-208ENST00000478423 PSMA2P25787 234 aa15.25■□□□□ 0.03
NPHP4-208ENST00000478423 ATP11AP98196 1134 aa15.25■□□□□ 0.03
NPHP4-208ENST00000478423 DARS2Q6PI48 645 aaKnown RBP15.25■□□□□ 0.03
NPHP4-208ENST00000478423 ATG4CQ96DT6 458 aa15.25■□□□□ 0.03
NPHP4-208ENST00000478423 HEMGNQ9BXL5 484 aa15.25■□□□□ 0.03
NPHP4-208ENST00000478423 PACSIN2Q9UNF0 486 aaPredicted RBP15.25■□□□□ 0.03
NPHP4-208ENST00000478423 SNX24Q9Y343 169 aa15.25■□□□□ 0.03
NPHP4-208ENST00000478423 WTIPA6NIX2 430 aaPredicted RBP15.25■□□□□ 0.03
NPHP4-208ENST00000478423 CIB2O75838 187 aa15.25■□□□□ 0.03
NPHP4-208ENST00000478423 TC2NQ8N9U0 490 aa15.25■□□□□ 0.03
NPHP4-208ENST00000478423 MYL3P08590 195 aa15.25■□□□□ 0.03
NPHP4-208ENST00000478423 ACTN1P12814 892 aa15.25■□□□□ 0.03
NPHP4-208ENST00000478423 ST3GAL1Q11201 340 aa15.25■□□□□ 0.03
NPHP4-208ENST00000478423 ZNF211Q13398 564 aaPredicted RBP15.25■□□□□ 0.03
NPHP4-208ENST00000478423 DSTYKQ6XUX3 929 aa15.25■□□□□ 0.03
NPHP4-208ENST00000478423 GPD1LQ8N335 351 aa15.25■□□□□ 0.03
NPHP4-208ENST00000478423 DAGLBQ8NCG7 672 aa15.25■□□□□ 0.03
NPHP4-208ENST00000478423 CDKL2Q92772 493 aa15.25■□□□□ 0.03
NPHP4-208ENST00000478423 ZWILCHQ9H900 591 aa15.25■□□□□ 0.03
NPHP4-208ENST00000478423 IQCA1LA6NCM1 817 aa15.25■□□□□ 0.03
NPHP4-208ENST00000478423 DDTLA6NHG4 134 aaPredicted RBP15.25■□□□□ 0.03
NPHP4-208ENST00000478423 CCT5P48643 541 aa15.25■□□□□ 0.03
NPHP4-208ENST00000478423 RPS6P62753 249 aaKnown RBP15.25■□□□□ 0.03
NPHP4-208ENST00000478423 PDE1BQ01064 536 aa15.25■□□□□ 0.03
NPHP4-208ENST00000478423 SLMAPQ14BN4 828 aa15.24■□□□□ 0.03
NPHP4-208ENST00000478423 ZC2HC1CQ53FD0 456 aaPredicted RBP15.24■□□□□ 0.03
NPHP4-208ENST00000478423 PPP6R3Q5H9R7 873 aaPredicted RBP15.24■□□□□ 0.03
NPHP4-208ENST00000478423 VGLL2Q8N8G2 317 aa15.24■□□□□ 0.03
NPHP4-208ENST00000478423 RIT2Q99578 217 aa15.24■□□□□ 0.03
NPHP4-208ENST00000478423 SYNGAP1Q96PV0 1343 aa15.24■□□□□ 0.03
NPHP4-208ENST00000478423 MYBP10242 640 aa15.24■□□□□ 0.03
NPHP4-208ENST00000478423 TNFAIP2Q03169 654 aa15.24■□□□□ 0.03
NPHP4-208ENST00000478423 EDRF1Q3B7T1 1238 aa15.24■□□□□ 0.03
NPHP4-208ENST00000478423 BBS9Q3SYG4 887 aa15.24■□□□□ 0.03
NPHP4-208ENST00000478423 AFAP1L2Q8N4X5 818 aa15.24■□□□□ 0.03
NPHP4-208ENST00000478423 TMEM143Q96AN5 459 aa15.24■□□□□ 0.03
NPHP4-208ENST00000478423 MXRA8Q9BRK3 442 aa15.24■□□□□ 0.03
NPHP4-208ENST00000478423 DDX47Q9H0S4 455 aaKnown RBP15.24■□□□□ 0.03
NPHP4-208ENST00000478423 KCNH7Q9NS40 1196 aa15.24■□□□□ 0.03
NPHP4-208ENST00000478423 TBK1Q9UHD2 729 aa15.24■□□□□ 0.03
NPHP4-208ENST00000478423 RICTORQ6R327 1708 aa15.24■□□□□ 0.03
NPHP4-208ENST00000478423 LPXNO60711 386 aa15.24■□□□□ 0.03
NPHP4-208ENST00000478423 SOX5P35711 763 aa15.24■□□□□ 0.03
NPHP4-208ENST00000478423 NNTQ13423 1086 aa15.24■□□□□ 0.03
NPHP4-208ENST00000478423 HPSEQ9Y251 543 aa15.24■□□□□ 0.03
NPHP4-208ENST00000478423 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.24■□□□□ 0.036e-6■■■■■ 34.1
NPHP4-208ENST00000478423 CTNND1O60716 968 aaKnown RBP15.23■□□□□ 0.03
NPHP4-208ENST00000478423 IL1R1P14778 569 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 TBXAS1P24557 533 aaPredicted RBP15.23■□□□□ 0.03
NPHP4-208ENST00000478423 GPC3P51654 580 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 CATSPER3Q86XQ3 398 aa15.23■□□□□ 0.03
NPHP4-208ENST00000478423 ZNF564Q8TBZ8 553 aaPredicted RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms