RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 KLHL14Q9P2G3 628 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 CNOT7Q9UIV1 285 aaKnown RBP10.61□□□□□ -0.71
COL13A1-207ENST00000478219 PCDHA3Q9Y5H8 950 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 NUMBLQ9Y6R0 609 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 WTIPA6NIX2 430 aaPredicted RBP10.61□□□□□ -0.71
COL13A1-207ENST00000478219 DDX3XO00571 662 aaKnown RBP eCLIP10.61□□□□□ -0.71
COL13A1-207ENST00000478219 NVLO15381 856 aaKnown RBP10.61□□□□□ -0.71
COL13A1-207ENST00000478219 ATP9AO75110 1047 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 BAG3O95817 575 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 KRT13P13646 458 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 GSTT1P30711 240 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 PPP1R2P41236 205 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 SERPINB4P48594 390 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 CACNA2D1P54289 1103 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 TMEM62Q0P6H9 643 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 MAPK7Q13164 816 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 MYBPC3Q14896 1274 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 PARP6Q2NL67 630 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 C1QTNF12Q5T7M4 302 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 RNF43Q68DV7 783 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 RBBP8NLQ8NC74 664 aaPredicted RBP10.61□□□□□ -0.71
COL13A1-207ENST00000478219 DDX12PQ92771 950 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 BICD1Q96G01 975 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 POP1Q99575 1024 aaKnown RBP10.61□□□□□ -0.71
COL13A1-207ENST00000478219 NDNQ99608 321 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 MAGEF1Q9HAY2 307 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 NENFQ9UMX5 172 aa10.61□□□□□ -0.71
COL13A1-207ENST00000478219 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.61□□□□□ -0.71
COL13A1-207ENST00000478219 USP17L12C9JPN9 530 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 USP17L21D6R901 530 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 IRS4O14654 1257 aaPredicted RBP10.6□□□□□ -0.71
COL13A1-207ENST00000478219 CYTH3O43739 400 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 ECEL1O95672 775 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 CYP2D6P10635 497 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 CETPP11597 493 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 ETS2P15036 469 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 SKIV2L2P42285 1042 aaKnown RBP10.6□□□□□ -0.71
COL13A1-207ENST00000478219 TXKP42681 527 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 AMPD3Q01432 767 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 CACNB1Q02641 598 aaPredicted RBP10.6□□□□□ -0.71
COL13A1-207ENST00000478219 ECM1Q16610 540 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 EXOC3L4Q17RC7 722 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 HEATR3Q7Z4Q2 680 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 APBB1IPQ7Z5R6 666 aaPredicted RBP10.6□□□□□ -0.71
COL13A1-207ENST00000478219 VSIG1Q86XK7 387 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 ATP8A2Q9NTI2 1148 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 DNAJC17Q9NVM6 304 aaKnown RBP10.6□□□□□ -0.71
COL13A1-207ENST00000478219 DNAAF2Q9NVR5 837 aaKnown RBP10.6□□□□□ -0.71
COL13A1-207ENST00000478219 SEC63Q9UGP8 760 aaKnown RBP10.6□□□□□ -0.71
COL13A1-207ENST00000478219 POTEMA6NI47 508 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 E7ENQ6 273 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 FGFR1OPO95684 399 aaKnown RBP10.6□□□□□ -0.71
COL13A1-207ENST00000478219 TAC1P20366 129 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 KCNA3P22001 575 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 MARCKSL1P49006 195 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 GALCP54803 685 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 INHBCP55103 352 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 FKBP3Q00688 224 aaKnown RBP10.6□□□□□ -0.71
COL13A1-207ENST00000478219 IRGCQ6NXR0 463 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 DSTYKQ6XUX3 929 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 BICDL1Q6ZP65 573 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 TAOK1Q7L7X3 1001 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 OLIG1Q8TAK6 271 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 U2AF1L4Q8WU68 220 aaKnown RBP10.6□□□□□ -0.71
COL13A1-207ENST00000478219 LARP4BQ92615 738 aaKnown RBP10.6□□□□□ -0.71
COL13A1-207ENST00000478219 RIOK1Q9BRS2 568 aaKnown RBP10.6□□□□□ -0.71
COL13A1-207ENST00000478219 TMEM109Q9BVC6 243 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 SLCO1B3Q9NPD5 702 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 TBK1Q9UHD2 729 aa10.6□□□□□ -0.71
COL13A1-207ENST00000478219 MAGEB6P1A0A0J9YX57 407 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 NPHP3-ACAD11A0A0J9YXS1 232 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 TCRBV7S2A1N4TA0A589 114 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 UBTFL6P0CB48 400 aaPredicted RBP10.59□□□□□ -0.71
COL13A1-207ENST00000478219 UCHL3P15374 230 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 ABCB4P21439 1286 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 KCNH2Q12809 1159 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 MTFR1Q15390 333 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 TSNAXIP1Q2TAA8 658 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 MFSD5Q6N075 450 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 BTNL9Q6UXG8 535 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 ZC3H18Q86VM9 953 aaKnown RBP10.59□□□□□ -0.71
COL13A1-207ENST00000478219 KBTBD2Q8IY47 623 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 PRELID2Q8N945 189 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 SLC35G2Q8TBE7 412 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 SCG3Q8WXD2 468 aaKnown RBP10.59□□□□□ -0.71
COL13A1-207ENST00000478219 GJA10Q969M2 543 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 AK8Q96MA6 479 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 PLEKHG4BQ96PX9 1271 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 MIPEPQ99797 713 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 ARMCX3Q9UH62 379 aaPredicted RBP10.59□□□□□ -0.71
COL13A1-207ENST00000478219 AMFRQ9UKV5 643 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 PTPN22Q9Y2R2 807 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 PLCH1Q4KWH8 1693 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 KAT6BQ8WYB5 2073 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 TP73O15350 636 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 H2AFZP0C0S5 128 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 BRAFP15056 766 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 MAGEA10P43363 369 aaPredicted RBP10.59□□□□□ -0.71
COL13A1-207ENST00000478219 KCNJ1P48048 391 aa10.59□□□□□ -0.71
COL13A1-207ENST00000478219 MCL1Q07820 350 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms