RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 FIBCD1Q8N539 461 aa17.34■□□□□ 0.37
HMGA1-206ENST00000478214 RNF149Q8NC42 400 aa17.34■□□□□ 0.37
HMGA1-206ENST00000478214 MAFAQ8NHW3 353 aaPredicted RBP17.34■□□□□ 0.37
HMGA1-206ENST00000478214 ASAP3Q8TDY4 903 aa17.34■□□□□ 0.37
HMGA1-206ENST00000478214 ZNF689Q96CS4 500 aaPredicted RBP17.34■□□□□ 0.37
HMGA1-206ENST00000478214 MMTAG2Q9BU76 263 aaKnown RBP17.34■□□□□ 0.37
HMGA1-206ENST00000478214 INO80BQ9C086 356 aaPredicted RBP17.34■□□□□ 0.37
HMGA1-206ENST00000478214 GPRC5CQ9NQ84 441 aa17.34■□□□□ 0.37
HMGA1-206ENST00000478214 DDX19AQ9NUU7 478 aaKnown RBP17.34■□□□□ 0.37
HMGA1-206ENST00000478214 LRFN2Q9ULH4 789 aa17.34■□□□□ 0.37
HMGA1-206ENST00000478214 ARHGEF35A5YM69 484 aa17.33■□□□□ 0.36
HMGA1-206ENST00000478214 ASAP2O43150 1006 aa17.33■□□□□ 0.36
HMGA1-206ENST00000478214 BTG3Q14201 252 aaPredicted RBP17.33■□□□□ 0.36
HMGA1-206ENST00000478214 MXD4Q14582 209 aaPredicted RBP17.33■□□□□ 0.36
HMGA1-206ENST00000478214 SF3A1Q15459 793 aaKnown RBP17.33■□□□□ 0.36
HMGA1-206ENST00000478214 PADI6Q6TGC4 694 aa17.33■□□□□ 0.36
HMGA1-206ENST00000478214 CATSPER4Q7RTX7 472 aa17.33■□□□□ 0.36
HMGA1-206ENST00000478214 POLR3FQ9H1D9 316 aaPredicted RBP17.33■□□□□ 0.36
HMGA1-206ENST00000478214 MINDY3Q9H8M7 445 aa17.33■□□□□ 0.36
HMGA1-206ENST00000478214 PCDHB7Q9Y5E2 793 aa17.33■□□□□ 0.36
HMGA1-206ENST00000478214 EYSQ5T1H1 3165 aa17.33■□□□□ 0.36
HMGA1-206ENST00000478214 BMP15O95972 392 aa17.32■□□□□ 0.36
HMGA1-206ENST00000478214 HSP90AA1P07900 732 aaKnown RBP17.32■□□□□ 0.36
HMGA1-206ENST00000478214 GLRA2P23416 452 aa17.32■□□□□ 0.36
HMGA1-206ENST00000478214 GRB10Q13322 594 aa17.32■□□□□ 0.36
HMGA1-206ENST00000478214 CAPSQ13938 189 aa17.32■□□□□ 0.36
HMGA1-206ENST00000478214 ZRSR1Q15695 479 aaKnown RBP17.32■□□□□ 0.36
HMGA1-206ENST00000478214 PAN2Q504Q3 1202 aaKnown RBP17.32■□□□□ 0.36
HMGA1-206ENST00000478214 SRGAP1Q7Z6B7 1085 aa17.32■□□□□ 0.36
HMGA1-206ENST00000478214 SPRYD3Q8NCJ5 442 aa17.32■□□□□ 0.36
HMGA1-206ENST00000478214 GDPD5Q8WTR4 605 aa17.32■□□□□ 0.36
HMGA1-206ENST00000478214 BHMT2Q9H2M3 363 aa17.32■□□□□ 0.36
HMGA1-206ENST00000478214 PIN4Q9Y237 131 aaKnown RBP17.32■□□□□ 0.36
HMGA1-206ENST00000478214 CLIC4Q9Y696 253 aa17.32■□□□□ 0.36
HMGA1-206ENST00000478214 ARID2Q68CP9 1835 aa17.32■□□□□ 0.36
HMGA1-206ENST00000478214 TRANK1O15050 2925 aa17.31■□□□□ 0.36
HMGA1-206ENST00000478214 E9PMD0 336 aa17.31■□□□□ 0.36
HMGA1-206ENST00000478214 LPXNO60711 386 aa17.31■□□□□ 0.36
HMGA1-206ENST00000478214 LINC00271P0C7V0 271 aa17.31■□□□□ 0.36
HMGA1-206ENST00000478214 CYP11B2P19099 503 aa17.31■□□□□ 0.36
HMGA1-206ENST00000478214 PHKA2P46019 1235 aa17.31■□□□□ 0.36
HMGA1-206ENST00000478214 PTENP60484 403 aa17.31■□□□□ 0.36
HMGA1-206ENST00000478214 GRIN1Q05586 938 aa17.31■□□□□ 0.36
HMGA1-206ENST00000478214 EPC2Q52LR7 807 aa17.31■□□□□ 0.36
HMGA1-206ENST00000478214 FAM102BQ5T8I3 360 aa17.31■□□□□ 0.36
HMGA1-206ENST00000478214 ECHDC2Q86YB7 292 aa17.31■□□□□ 0.36
HMGA1-206ENST00000478214 TMEM192Q8IY95 271 aa17.31■□□□□ 0.36
HMGA1-206ENST00000478214 CMTR2Q8IYT2 770 aaKnown RBP17.31■□□□□ 0.36
HMGA1-206ENST00000478214 MCPH1Q8NEM0 835 aa17.31■□□□□ 0.36
HMGA1-206ENST00000478214 FBXO22Q8NEZ5 403 aa17.31■□□□□ 0.36
HMGA1-206ENST00000478214 ELAC1Q9H777 363 aaKnown RBP17.31■□□□□ 0.36
HMGA1-206ENST00000478214 CHST12Q9NRB3 414 aa17.31■□□□□ 0.36
HMGA1-206ENST00000478214 TMEM161AQ9NX61 479 aa17.31■□□□□ 0.36
HMGA1-206ENST00000478214 DNM3Q9UQ16 869 aa17.31■□□□□ 0.36
HMGA1-206ENST00000478214 COL4A6Q14031 1691 aa17.31■□□□□ 0.36
HMGA1-206ENST00000478214 EYA4O95677 639 aa17.3■□□□□ 0.36
HMGA1-206ENST00000478214 FGFR1P11362 822 aa17.3■□□□□ 0.36
HMGA1-206ENST00000478214 POU5F1BQ06416 359 aa17.3■□□□□ 0.36
HMGA1-206ENST00000478214 TFDP1Q14186 410 aa17.3■□□□□ 0.36
HMGA1-206ENST00000478214 PTPAQ15257 358 aa17.3■□□□□ 0.36
HMGA1-206ENST00000478214 TWF2Q6IBS0 349 aaKnown RBP17.3■□□□□ 0.36
HMGA1-206ENST00000478214 KCNK18Q7Z418 384 aa17.3■□□□□ 0.36
HMGA1-206ENST00000478214 RNF169Q8NCN4 708 aa17.3■□□□□ 0.36
HMGA1-206ENST00000478214 PPM1EQ8WY54 764 aa17.3■□□□□ 0.36
HMGA1-206ENST00000478214 SAMD11Q96NU1 681 aa17.3■□□□□ 0.36
HMGA1-206ENST00000478214 PNMA5Q96PV4 448 aa17.3■□□□□ 0.36
HMGA1-206ENST00000478214 ZSCAN16Q9H4T2 348 aaPredicted RBP17.3■□□□□ 0.36
HMGA1-206ENST00000478214 POLD4Q9HCU8 107 aa17.3■□□□□ 0.36
HMGA1-206ENST00000478214 RNF216Q9NWF9 866 aaPredicted RBP17.3■□□□□ 0.36
HMGA1-206ENST00000478214 DACT1Q9NYF0 836 aa17.3■□□□□ 0.36
HMGA1-206ENST00000478214 MTCH2Q9Y6C9 303 aa17.3■□□□□ 0.36
HMGA1-206ENST00000478214 MRPL42Q9Y6G3 142 aaKnown RBP17.3■□□□□ 0.36
HMGA1-206ENST00000478214 A0A0U1RQF3 1178 aa17.29■□□□□ 0.36
HMGA1-206ENST00000478214 TBKBP1A7MCY6 615 aa17.29■□□□□ 0.36
HMGA1-206ENST00000478214 HOXA11P31270 313 aaPredicted RBP17.29■□□□□ 0.36
HMGA1-206ENST00000478214 CTNNB1P35222 781 aa17.29■□□□□ 0.36
HMGA1-206ENST00000478214 CEBPZQ03701 1054 aaKnown RBP17.29■□□□□ 0.36
HMGA1-206ENST00000478214 CCDC85BQ15834 202 aaPredicted RBP17.29■□□□□ 0.36
HMGA1-206ENST00000478214 HYIQ5T013 277 aa17.29■□□□□ 0.36
HMGA1-206ENST00000478214 IFNLR1Q8IU57 520 aaPredicted RBP17.29■□□□□ 0.36
HMGA1-206ENST00000478214 BSNDQ8WZ55 320 aa17.29■□□□□ 0.36
HMGA1-206ENST00000478214 CLP1Q92989 425 aaKnown RBP17.29■□□□□ 0.36
HMGA1-206ENST00000478214 AK8Q96MA6 479 aa17.29■□□□□ 0.36
HMGA1-206ENST00000478214 PLIN2Q99541 437 aa17.29■□□□□ 0.36
HMGA1-206ENST00000478214 AGPAT5Q9NUQ2 364 aa17.29■□□□□ 0.36
HMGA1-206ENST00000478214 RNF19AQ9NV58 838 aa17.29■□□□□ 0.36
HMGA1-206ENST00000478214 PRUNE2Q8WUY3 3088 aa17.29■□□□□ 0.36
HMGA1-206ENST00000478214 LRRIQ4A6NIV6 560 aa17.28■□□□□ 0.36
HMGA1-206ENST00000478214 INO80B-WBP1J3KQ70 363 aa17.28■□□□□ 0.36
HMGA1-206ENST00000478214 GTPBP6O43824 516 aaPredicted RBP17.28■□□□□ 0.36
HMGA1-206ENST00000478214 ATF7P17544 494 aaPredicted RBP17.28■□□□□ 0.36
HMGA1-206ENST00000478214 POU3F3P20264 500 aaPredicted RBP17.28■□□□□ 0.36
HMGA1-206ENST00000478214 MARCKSP29966 332 aaPredicted RBP17.28■□□□□ 0.36
HMGA1-206ENST00000478214 BMPR1AP36894 532 aa17.28■□□□□ 0.36
HMGA1-206ENST00000478214 MBTD1Q05BQ5 628 aa17.28■□□□□ 0.36
HMGA1-206ENST00000478214 FOXD4L5Q5VV16 416 aaPredicted RBP17.28■□□□□ 0.36
HMGA1-206ENST00000478214 ZNF598Q86UK7 904 aaKnown RBP17.28■□□□□ 0.36
HMGA1-206ENST00000478214 CABP7Q86V35 215 aa17.28■□□□□ 0.36
HMGA1-206ENST00000478214 MICALL1Q8N3F8 863 aa17.28■□□□□ 0.36
HMGA1-206ENST00000478214 FOXD4L4Q8WXT5 416 aaPredicted RBP17.28■□□□□ 0.36
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