RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 ROM1Q03395 351 aa6.33□□□□□ -1.4
LMBR1-216ENST00000477983 BMS1Q14692 1282 aaKnown RBP6.33□□□□□ -1.4
LMBR1-216ENST00000477983 NKD2Q969F2 451 aaPredicted RBP6.33□□□□□ -1.4
LMBR1-216ENST00000477983 CHFRQ96EP1 664 aa6.33□□□□□ -1.4
LMBR1-216ENST00000477983 TMEM176AQ96HP8 235 aa6.33□□□□□ -1.4
LMBR1-216ENST00000477983 C16orf92Q96LL3 132 aa6.33□□□□□ -1.4
LMBR1-216ENST00000477983 TRIM8Q9BZR9 551 aa6.33□□□□□ -1.4
LMBR1-216ENST00000477983 SAMD15Q9P1V8 674 aa6.33□□□□□ -1.4
LMBR1-216ENST00000477983 DENND2AQ9ULE3 1009 aa6.33□□□□□ -1.4
LMBR1-216ENST00000477983 SH3BP1Q9Y3L3 701 aa6.33□□□□□ -1.4
LMBR1-216ENST00000477983 ZNF608Q9ULD9 1512 aaPredicted RBP6.32□□□□□ -1.4
LMBR1-216ENST00000477983 CAPN14A8MX76 684 aa6.32□□□□□ -1.4
LMBR1-216ENST00000477983 TRAF5O00463 557 aa6.32□□□□□ -1.4
LMBR1-216ENST00000477983 GLRX3O76003 335 aaKnown RBP6.32□□□□□ -1.4
LMBR1-216ENST00000477983 RAPGEF3O95398 923 aa6.32□□□□□ -1.4
LMBR1-216ENST00000477983 CYP17A1P05093 508 aa6.32□□□□□ -1.4
LMBR1-216ENST00000477983 IGFALSP35858 605 aa6.32□□□□□ -1.4
LMBR1-216ENST00000477983 SLC6A3Q01959 620 aa6.32□□□□□ -1.4
LMBR1-216ENST00000477983 DGKDQ16760 1214 aa6.32□□□□□ -1.4
LMBR1-216ENST00000477983 ANKRD35Q8N283 1001 aa6.32□□□□□ -1.4
LMBR1-216ENST00000477983 CHST14Q8NCH0 376 aa6.32□□□□□ -1.4
LMBR1-216ENST00000477983 GPHA2Q96T91 129 aa6.32□□□□□ -1.4
LMBR1-216ENST00000477983 PBRM1Q86U86 1689 aa6.32□□□□□ -1.4
LMBR1-216ENST00000477983 VPS8Q8N3P4 1428 aa6.32□□□□□ -1.4
LMBR1-216ENST00000477983 ARAP1Q96P48 1450 aa6.31□□□□□ -1.4
LMBR1-216ENST00000477983 A0A1W2PRX2 142 aa6.31□□□□□ -1.4
LMBR1-216ENST00000477983 ASLP04424 464 aa6.31□□□□□ -1.4
LMBR1-216ENST00000477983 RRP1BQ14684 758 aaKnown RBP6.31□□□□□ -1.4
LMBR1-216ENST00000477983 ACAP1Q15027 740 aa6.31□□□□□ -1.4
LMBR1-216ENST00000477983 GAGE13Q4V321 117 aa6.31□□□□□ -1.4
LMBR1-216ENST00000477983 OR5AN1Q8NGI8 311 aa6.31□□□□□ -1.4
LMBR1-216ENST00000477983 HAPLN2Q9GZV7 340 aa6.31□□□□□ -1.4
LMBR1-216ENST00000477983 PARPBPQ9NWS1 579 aa6.31□□□□□ -1.4
LMBR1-216ENST00000477983 KCMF1Q9P0J7 381 aa6.31□□□□□ -1.4
LMBR1-216ENST00000477983 MAGEL2Q9UJ55 1249 aa6.31□□□□□ -1.4
LMBR1-216ENST00000477983 GRIN2BQ13224 1484 aa6.3□□□□□ -1.4
LMBR1-216ENST00000477983 ARHGAP35Q9NRY4 1499 aa6.3□□□□□ -1.4
LMBR1-216ENST00000477983 UBA6A0AVT1 1052 aaPredicted RBP6.3□□□□□ -1.4
LMBR1-216ENST00000477983 KRT37O76014 449 aa6.3□□□□□ -1.4
LMBR1-216ENST00000477983 MAKP20794 623 aa6.3□□□□□ -1.4
LMBR1-216ENST00000477983 STAT3P40763 770 aa6.3□□□□□ -1.4
LMBR1-216ENST00000477983 SQSTM1Q13501 440 aa6.3□□□□□ -1.4
LMBR1-216ENST00000477983 EPHA7Q15375 998 aa6.3□□□□□ -1.4
LMBR1-216ENST00000477983 TTC38Q5R3I4 469 aa6.3□□□□□ -1.4
LMBR1-216ENST00000477983 SLFN12LQ6IEE8 588 aa6.3□□□□□ -1.4
LMBR1-216ENST00000477983 BMP8AQ7Z5Y6 402 aa6.3□□□□□ -1.4
LMBR1-216ENST00000477983 NME9Q86XW9 330 aa6.3□□□□□ -1.4
LMBR1-216ENST00000477983 GCDHQ92947 438 aaPredicted RBP6.3□□□□□ -1.4
LMBR1-216ENST00000477983 MIEF2Q96C03 454 aa6.3□□□□□ -1.4
LMBR1-216ENST00000477983 MRFAP1L1Q96HT8 127 aa6.3□□□□□ -1.4
LMBR1-216ENST00000477983 CEP89Q96ST8 783 aa6.3□□□□□ -1.4
LMBR1-216ENST00000477983 IKZF4Q9H2S9 585 aa6.3□□□□□ -1.4
LMBR1-216ENST00000477983 MMRN2Q9H8L6 949 aa6.3□□□□□ -1.4
LMBR1-216ENST00000477983 PTPDC1A2A3K4 754 aa6.29□□□□□ -1.4
LMBR1-216ENST00000477983 FHAD1B1AJZ9 1412 aa6.29□□□□□ -1.4
LMBR1-216ENST00000477983 DNAJC8O75937 253 aaPredicted RBP6.29□□□□□ -1.4
LMBR1-216ENST00000477983 INHBCP55103 352 aa6.29□□□□□ -1.4
LMBR1-216ENST00000477983 FAM111BQ6SJ93 734 aa6.29□□□□□ -1.4
LMBR1-216ENST00000477983 CLEC14AQ86T13 490 aa6.29□□□□□ -1.4
LMBR1-216ENST00000477983 ANKRD53Q8N9V6 530 aa6.29□□□□□ -1.4
LMBR1-216ENST00000477983 PLA2G15Q8NCC3 412 aa6.29□□□□□ -1.4
LMBR1-216ENST00000477983 ZNF483Q8TF39 744 aaPredicted RBP6.29□□□□□ -1.4
LMBR1-216ENST00000477983 LARP4BQ92615 738 aaKnown RBP6.29□□□□□ -1.4
LMBR1-216ENST00000477983 B4GALT6Q9UBX8 382 aa6.29□□□□□ -1.4
LMBR1-216ENST00000477983 RBM8AQ9Y5S9 174 aaKnown RBP6.29□□□□□ -1.4
LMBR1-216ENST00000477983 CTTNBP2Q8WZ74 1663 aa6.29□□□□□ -1.4
LMBR1-216ENST00000477983 EIF4G3O43432 1585 aaKnown RBP6.28□□□□□ -1.4
LMBR1-216ENST00000477983 ADAMTS12P58397 1594 aa6.28□□□□□ -1.4
LMBR1-216ENST00000477983 BCAR1P56945 870 aa6.28□□□□□ -1.4
LMBR1-216ENST00000477983 BPIFB4P59827 614 aa6.28□□□□□ -1.4
LMBR1-216ENST00000477983 TCIRG1Q13488 830 aa6.28□□□□□ -1.4
LMBR1-216ENST00000477983 SMN1Q16637 294 aaKnown RBP6.28□□□□□ -1.4
LMBR1-216ENST00000477983 GAREM2Q75VX8 874 aa6.28□□□□□ -1.4
LMBR1-216ENST00000477983 KANSL1Q7Z3B3 1105 aa6.28□□□□□ -1.4
LMBR1-216ENST00000477983 KIAA1958Q8N8K9 716 aa6.28□□□□□ -1.4
LMBR1-216ENST00000477983 NEU4Q8WWR8 484 aaPredicted RBP6.28□□□□□ -1.4
LMBR1-216ENST00000477983 RPL10LQ96L21 214 aaKnown RBP6.28□□□□□ -1.4
LMBR1-216ENST00000477983 KANSL2Q9H9L4 492 aa6.28□□□□□ -1.4
LMBR1-216ENST00000477983 CABP5Q9NP86 173 aa6.28□□□□□ -1.4
LMBR1-216ENST00000477983 C11orf21Q9P2W6 132 aa6.28□□□□□ -1.4
LMBR1-216ENST00000477983 TNPO3Q9Y5L0 923 aaKnown RBP6.28□□□□□ -1.4
LMBR1-216ENST00000477983 SNAPC4Q5SXM2 1469 aa6.28□□□□□ -1.4
LMBR1-216ENST00000477983 H7C1D1 291 aa6.27□□□□□ -1.41
LMBR1-216ENST00000477983 OPA1O60313 960 aa6.27□□□□□ -1.41
LMBR1-216ENST00000477983 ADH4P08319 380 aa6.27□□□□□ -1.41
LMBR1-216ENST00000477983 VSIG10L2P0DP72 767 aa6.27□□□□□ -1.41
LMBR1-216ENST00000477983 SCNN1GP51170 649 aa6.27□□□□□ -1.41
LMBR1-216ENST00000477983 ADCY1Q08828 1119 aa6.27□□□□□ -1.41
LMBR1-216ENST00000477983 ZNF174Q15697 407 aa6.27□□□□□ -1.41
LMBR1-216ENST00000477983 LDLRAD3Q86YD5 345 aa6.27□□□□□ -1.41
LMBR1-216ENST00000477983 ULK2Q8IYT8 1036 aa6.27□□□□□ -1.41
LMBR1-216ENST00000477983 SH3TC2Q8TF17 1288 aa6.27□□□□□ -1.41
LMBR1-216ENST00000477983 DYDC2Q96IM9 177 aa6.27□□□□□ -1.41
LMBR1-216ENST00000477983 WDR92Q96MX6 357 aa6.27□□□□□ -1.41
LMBR1-216ENST00000477983 ORAI3Q9BRQ5 295 aa6.27□□□□□ -1.41
LMBR1-216ENST00000477983 PCIF1Q9H4Z3 704 aa6.27□□□□□ -1.41
LMBR1-216ENST00000477983 ZSWIM4Q9H7M6 989 aa6.27□□□□□ -1.41
LMBR1-216ENST00000477983 UBE2QL1A1L167 161 aa6.26□□□□□ -1.41
LMBR1-216ENST00000477983 CBX4O00257 560 aa6.26□□□□□ -1.41
LMBR1-216ENST00000477983 PPP1R12AO14974 1030 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms