RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 HSPA1LP34931 641 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 DGKZQ13574 1117 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 SLC29A2Q14542 456 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 NAB2Q15742 525 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 PTGISQ16647 500 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 KNOP1Q1ED39 458 aaKnown RBP10.56□□□□□ -0.72
CMC1-209ENST00000477739 SPRED3Q2MJR0 410 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 HGSNATQ68CP4 663 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 MCTP2Q6DN12 878 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 APOBEC3HQ6NTF7 200 aaKnown RBP10.56□□□□□ -0.72
CMC1-209ENST00000477739 L3MBTL1Q9Y468 752 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 ECM29Q5VYK3 1845 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 ABCB11O95342 1321 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 GUCY2CP25092 1073 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 PON1P27169 355 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 GABPAQ06546 454 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 ORC2Q13416 577 aaPredicted RBP10.56□□□□□ -0.72
CMC1-209ENST00000477739 BIRC3Q13489 604 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 CCDC13Q8IYE1 715 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 RBM46Q8TBY0 533 aaKnown RBP10.56□□□□□ -0.72
CMC1-209ENST00000477739 KRT35Q92764 455 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 MASTLQ96GX5 879 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 CSRNP1Q96S65 589 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 NAP1L4Q99733 375 aaKnown RBP10.56□□□□□ -0.72
CMC1-209ENST00000477739 GLT8D2Q9H1C3 349 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 SAMD15Q9P1V8 674 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 CTNNAL1Q9UBT7 734 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 CNOT8Q9UFF9 292 aaKnown RBP10.56□□□□□ -0.72
CMC1-209ENST00000477739 EML1O00423 815 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 CALUO43852 315 aaPredicted RBP10.56□□□□□ -0.72
CMC1-209ENST00000477739 FTLP02792 175 aaPredicted RBP10.56□□□□□ -0.72
CMC1-209ENST00000477739 RPL13P26373 211 aaKnown RBP10.56□□□□□ -0.72
CMC1-209ENST00000477739 FAM102BQ5T8I3 360 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 ZNF449Q6P9G9 518 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 PODNQ7Z5L7 613 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 ZSWIM2Q8NEG5 633 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 SUGT1Q9Y2Z0 365 aa10.56□□□□□ -0.72
CMC1-209ENST00000477739 GMNCA6NCL1 334 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 FAM86B1E9PN63 330 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 FAM86B2P0C5J1 330 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 CHN1P15882 459 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 DYNLT1P63172 113 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 PSMD2Q13200 908 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 IFI16Q16666 785 aaKnown RBP10.55□□□□□ -0.72
CMC1-209ENST00000477739 ALS2CLQ60I27 953 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 NUGGCQ68CJ6 796 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 PPP4R3AQ6IN85 833 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 COL23A1Q86Y22 540 aaPredicted RBP10.55□□□□□ -0.72
CMC1-209ENST00000477739 ARFGAP2Q8N6H7 521 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 SEMA4AQ9H3S1 761 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 VIPAS39Q9H9C1 493 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 CENPFP49454 3210 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 IGSF9BQ9UPX0 1349 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 TESPA1A2RU30 521 aaPredicted RBP10.55□□□□□ -0.72
CMC1-209ENST00000477739 ECE2O60344 883 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 SPAG7O75391 227 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 GJB6O95452 261 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 ATF7P17544 494 aaPredicted RBP10.55□□□□□ -0.72
CMC1-209ENST00000477739 MYL7Q01449 175 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 MYO1EQ12965 1108 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 CALCOCO2Q13137 446 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 SEMA3FQ13275 785 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 AOC3Q16853 763 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 HHIPL2Q6UWX4 724 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 RAPGEF5Q92565 580 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 DHX38Q92620 1227 aaKnown RBP10.55□□□□□ -0.72
CMC1-209ENST00000477739 C9orf72Q96LT7 481 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 EPN3Q9H201 632 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 ERVK-5Q9HDB9 667 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 INTUQ9ULD6 942 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 PI4K2BG5E9Z4 385 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 FOXN3O00409 490 aaPredicted RBP10.55□□□□□ -0.72
CMC1-209ENST00000477739 CYP26A1O43174 497 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 PPIP5K2O43314 1243 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 ALAS1P13196 640 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 CHRNA5P30532 468 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 PSMC4P43686 418 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 RUFY4Q6ZNE9 571 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 SLFN12Q8IYM2 578 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 SLC17A8Q8NDX2 589 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 ZNF653Q96CK0 615 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 DNAJC19Q96DA6 116 aa10.55□□□□□ -0.72
CMC1-209ENST00000477739 NEBLO76041 1014 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 BMP3P12645 472 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 EIF2AK2P19525 551 aaKnown RBP10.54□□□□□ -0.72
CMC1-209ENST00000477739 DLG4P78352 724 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 ZNF844Q08AG5 666 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 CBWD6Q4V339 395 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 SEZ6Q53EL9 994 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 CBWD3Q5JTY5 395 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 CBWD5Q5RIA9 395 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 CCDC91Q7Z6B0 441 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 SRRM1Q8IYB3 904 aaKnown RBP10.54□□□□□ -0.72
CMC1-209ENST00000477739 MICAL1Q8TDZ2 1067 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 HVCN1Q96D96 273 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 PURBQ96QR8 312 aaKnown RBP10.54□□□□□ -0.72
CMC1-209ENST00000477739 EIF2AK1Q9BQI3 630 aaKnown RBP10.54□□□□□ -0.72
CMC1-209ENST00000477739 KLC4Q9NSK0 619 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 ODF2LQ9ULJ1 636 aa10.54□□□□□ -0.72
CMC1-209ENST00000477739 GRIN2DO15399 1336 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms