RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 TMEM105Q8N8V8 129 aa7.28□□□□□ -1.24
LINC00173-202ENST00000477702 CAGE1Q8TC20 777 aa7.28□□□□□ -1.24
LINC00173-202ENST00000477702 ZNF512BQ96KM6 892 aaPredicted RBP7.28□□□□□ -1.24
LINC00173-202ENST00000477702 CCDC17Q96LX7 622 aa7.28□□□□□ -1.24
LINC00173-202ENST00000477702 SAMD11Q96NU1 681 aa7.28□□□□□ -1.24
LINC00173-202ENST00000477702 YME1L1Q96TA2 773 aa7.28□□□□□ -1.24
LINC00173-202ENST00000477702 ADAM19Q9H013 955 aa7.28□□□□□ -1.24
LINC00173-202ENST00000477702 CCDC8Q9H0W5 538 aaPredicted RBP7.28□□□□□ -1.24
LINC00173-202ENST00000477702 C12orf49Q9H741 205 aa7.28□□□□□ -1.24
LINC00173-202ENST00000477702 ACAD9Q9H845 621 aa7.28□□□□□ -1.24
LINC00173-202ENST00000477702 ARMT1Q9H993 441 aa7.28□□□□□ -1.24
LINC00173-202ENST00000477702 VTA1Q9NP79 307 aa7.28□□□□□ -1.24
LINC00173-202ENST00000477702 SMC4Q9NTJ3 1288 aa7.28□□□□□ -1.24
LINC00173-202ENST00000477702 DBNLQ9UJU6 430 aaKnown RBP7.28□□□□□ -1.24
LINC00173-202ENST00000477702 ISY1Q9ULR0 285 aaKnown RBP7.28□□□□□ -1.24
LINC00173-202ENST00000477702 SOX13Q9UN79 622 aa7.28□□□□□ -1.24
LINC00173-202ENST00000477702 SCN10AQ9Y5Y9 1956 aa7.28□□□□□ -1.24
LINC00173-202ENST00000477702 FAM229AH3BQW9 127 aa7.27□□□□□ -1.25
LINC00173-202ENST00000477702 LINC01387J3KSC0 135 aa7.27□□□□□ -1.25
LINC00173-202ENST00000477702 EFCAB14O75071 495 aa7.27□□□□□ -1.25
LINC00173-202ENST00000477702 USP17L7P0C7H9 530 aa7.27□□□□□ -1.25
LINC00173-202ENST00000477702 ALAS1P13196 640 aa7.27□□□□□ -1.25
LINC00173-202ENST00000477702 PDE6AP16499 860 aa7.27□□□□□ -1.25
LINC00173-202ENST00000477702 CDC27P30260 824 aa7.27□□□□□ -1.25
LINC00173-202ENST00000477702 CTNNB1P35222 781 aa7.27□□□□□ -1.25
LINC00173-202ENST00000477702 RRP1P56182 461 aaKnown RBP7.27□□□□□ -1.25
LINC00173-202ENST00000477702 SNAP25P60880 206 aa7.27□□□□□ -1.25
LINC00173-202ENST00000477702 PTPN11Q06124 597 aaPredicted RBP7.27□□□□□ -1.25
LINC00173-202ENST00000477702 COL9A2Q14055 689 aaPredicted RBP7.27□□□□□ -1.25
LINC00173-202ENST00000477702 MBTPS1Q14703 1052 aa7.27□□□□□ -1.25
LINC00173-202ENST00000477702 CBX2Q14781 532 aaPredicted RBP7.27□□□□□ -1.25
LINC00173-202ENST00000477702 BRDTQ58F21 947 aaPredicted RBP7.27□□□□□ -1.25
LINC00173-202ENST00000477702 KIAA2013Q8IYS2 634 aa7.27□□□□□ -1.25
LINC00173-202ENST00000477702 STK11IPQ8N1F8 1099 aa7.27□□□□□ -1.25
LINC00173-202ENST00000477702 C3orf58Q8NDZ4 430 aa7.27□□□□□ -1.25
LINC00173-202ENST00000477702 COPS5Q92905 334 aa7.27□□□□□ -1.25
LINC00173-202ENST00000477702 PLVAPQ9BX97 442 aa7.27□□□□□ -1.25
LINC00173-202ENST00000477702 KIAA1522Q9P206 1035 aaPredicted RBP7.27□□□□□ -1.25
LINC00173-202ENST00000477702 NOB1Q9ULX3 412 aaKnown RBP7.27□□□□□ -1.25
LINC00173-202ENST00000477702 USP15Q9Y4E8 981 aaPredicted RBP7.27□□□□□ -1.25
LINC00173-202ENST00000477702 AK5Q9Y6K8 562 aa7.27□□□□□ -1.25
LINC00173-202ENST00000477702 ZFYVE26Q68DK2 2539 aa7.27□□□□□ -1.25
LINC00173-202ENST00000477702 FAM208BQ5VWN6 2430 aa7.26□□□□□ -1.25
LINC00173-202ENST00000477702 IGSF3O75054 1194 aa7.26□□□□□ -1.25
LINC00173-202ENST00000477702 EYA4O95677 639 aa7.26□□□□□ -1.25
LINC00173-202ENST00000477702 CTSHP09668 335 aa7.26□□□□□ -1.25
LINC00173-202ENST00000477702 SP100P23497 879 aaPredicted RBP7.26□□□□□ -1.25
LINC00173-202ENST00000477702 OAZ1P54368 228 aa7.26□□□□□ -1.25
LINC00173-202ENST00000477702 ADAM15Q13444 863 aa7.26□□□□□ -1.25
LINC00173-202ENST00000477702 PTPN21Q16825 1174 aa7.26□□□□□ -1.25
LINC00173-202ENST00000477702 ST3GAL2Q16842 350 aa7.26□□□□□ -1.25
LINC00173-202ENST00000477702 MUM1L1Q5H9M0 696 aa7.26□□□□□ -1.25
LINC00173-202ENST00000477702 ZNF618Q5T7W0 954 aa7.26□□□□□ -1.25
LINC00173-202ENST00000477702 SLC9C2Q5TAH2 1124 aa7.26□□□□□ -1.25
LINC00173-202ENST00000477702 C12orf60Q5U649 245 aa7.26□□□□□ -1.25
LINC00173-202ENST00000477702 NSMFQ6X4W1 530 aa7.26□□□□□ -1.25
LINC00173-202ENST00000477702 WFDC8Q8IUA0 241 aa7.26□□□□□ -1.25
LINC00173-202ENST00000477702 DBF4BQ8NFT6 615 aa7.26□□□□□ -1.25
LINC00173-202ENST00000477702 KCNG4Q8TDN1 519 aa7.26□□□□□ -1.25
LINC00173-202ENST00000477702 BSNDQ8WZ55 320 aa7.26□□□□□ -1.25
LINC00173-202ENST00000477702 WNT8BQ93098 351 aa7.26□□□□□ -1.25
LINC00173-202ENST00000477702 MSLNLQ96KJ4 702 aa7.26□□□□□ -1.25
LINC00173-202ENST00000477702 RIPOR3Q96MK2 946 aa7.26□□□□□ -1.25
LINC00173-202ENST00000477702 GPR108Q9NPR9 543 aa7.26□□□□□ -1.25
LINC00173-202ENST00000477702 CLEC1BQ9P126 229 aa7.26□□□□□ -1.25
LINC00173-202ENST00000477702 CLIP2Q9UDT6 1046 aa7.26□□□□□ -1.25
LINC00173-202ENST00000477702 MYH8P13535 1937 aa7.26□□□□□ -1.25
LINC00173-202ENST00000477702 ZNF532Q9HCE3 1301 aa7.26□□□□□ -1.25
LINC00173-202ENST00000477702 MICAL3Q7RTP6 2002 aa7.25□□□□□ -1.25
LINC00173-202ENST00000477702 KPNA6O60684 536 aa7.25□□□□□ -1.25
LINC00173-202ENST00000477702 FBXO24O75426 580 aa7.25□□□□□ -1.25
LINC00173-202ENST00000477702 GNAI3P08754 354 aa7.25□□□□□ -1.25
LINC00173-202ENST00000477702 EIF4BP23588 611 aaKnown RBP7.25□□□□□ -1.25
LINC00173-202ENST00000477702 ICAM3P32942 547 aa7.25□□□□□ -1.25
LINC00173-202ENST00000477702 ZNF200P98182 395 aaPredicted RBP7.25□□□□□ -1.25
LINC00173-202ENST00000477702 MRPL58Q14197 206 aaKnown RBP7.25□□□□□ -1.25
LINC00173-202ENST00000477702 PUM1Q14671 1186 aaKnown RBP eCLIP7.25□□□□□ -1.25
LINC00173-202ENST00000477702 ZNF423Q2M1K9 1284 aa7.25□□□□□ -1.25
LINC00173-202ENST00000477702 MCTP2Q6DN12 878 aa7.25□□□□□ -1.25
LINC00173-202ENST00000477702 DTHD1Q6ZMT9 781 aa7.25□□□□□ -1.25
LINC00173-202ENST00000477702 C16orf86Q6ZW13 317 aa7.25□□□□□ -1.25
LINC00173-202ENST00000477702 ADGRD2Q7Z7M1 963 aa7.25□□□□□ -1.25
LINC00173-202ENST00000477702 LRRC47Q8N1G4 583 aaKnown RBP7.25□□□□□ -1.25
LINC00173-202ENST00000477702 SMRP1Q8NCR6 262 aa7.25□□□□□ -1.25
LINC00173-202ENST00000477702 CYP39A1Q9NYL5 469 aa7.25□□□□□ -1.25
LINC00173-202ENST00000477702 VTI1BQ9UEU0 232 aa7.25□□□□□ -1.25
LINC00173-202ENST00000477702 FEM1BQ9UK73 627 aa7.25□□□□□ -1.25
LINC00173-202ENST00000477702 BARX2Q9UMQ3 279 aaPredicted RBP7.25□□□□□ -1.25
LINC00173-202ENST00000477702 GPR179Q6PRD1 2367 aa7.25□□□□□ -1.25
LINC00173-202ENST00000477702 ATG2AQ2TAZ0 1938 aa7.25□□□□□ -1.25
LINC00173-202ENST00000477702 RAD50Q92878 1312 aa7.25□□□□□ -1.25
LINC00173-202ENST00000477702 OTOGLQ3ZCN5 2332 aa7.24□□□□□ -1.25
LINC00173-202ENST00000477702 TMEM232C9JQI7 657 aa7.24□□□□□ -1.25
LINC00173-202ENST00000477702 SORBS3O60504 671 aa7.24□□□□□ -1.25
LINC00173-202ENST00000477702 DEAF1O75398 565 aaPredicted RBP7.24□□□□□ -1.25
LINC00173-202ENST00000477702 MBD4O95243 580 aa7.24□□□□□ -1.25
LINC00173-202ENST00000477702 PARNO95453 639 aaKnown RBP7.24□□□□□ -1.25
LINC00173-202ENST00000477702 ARP10275 920 aa7.24□□□□□ -1.25
LINC00173-202ENST00000477702 ITPKAP23677 461 aa7.24□□□□□ -1.25
LINC00173-202ENST00000477702 PDE4BQ07343 736 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms