RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	SEPT6	Q14141	434 aa		5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	ADGRF1	Q5T601	910 aa		5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	CDCA2	Q69YH5	1023 aa	Predicted RBP	5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	SULT6B1	Q6IMI4	303 aa		5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	SLC30A9	Q6PML9	568 aa		5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	CPLX2	Q6PUV4	134 aa	Known RBP	5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	UBE3B	Q7Z3V4	1068 aa		5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	SPPL2C	Q8IUH8	684 aa		5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	DHX40	Q8IX18	779 aa	Known RBP	5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	ELOA2	Q8IYF1	753 aa	Predicted RBP	5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	OR8K1	Q8NGG5	319 aa		5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	CFAP61	Q8NHU2	1237 aa		5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	SMARCC2	Q8TAQ2	1214 aa		5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	CCDC51	Q96ER9	411 aa		5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	BICD1	Q96G01	975 aa		5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	BORCS6	Q96GS4	357 aa		5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	RMDN2	Q96LZ7	410 aa		5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	ALS2CR12	Q96Q35	445 aa		5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	G6PC3	Q9BUM1	346 aa		5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	UBA5	Q9GZZ9	404 aa		5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	BICC1	Q9H694	974 aa	Known RBP	5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	IRAK4	Q9NWZ3	460 aa		5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	GOLGA6A	Q9NYA3	693 aa		5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	HOOK1	Q9UJC3	728 aa	Known RBP	5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	RCOR1	Q9UKL0	485 aa		5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	CEP131	Q9UPN4	1083 aa		5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	PPP2R2C	Q9Y2T4	447 aa		5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	PCDHB5	Q9Y5E4	795 aa		5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	USP16	Q9Y5T5	823 aa		5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	CYP46A1	Q9Y6A2	500 aa		5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	RPS6KL1	Q9Y6S9	549 aa		5.24	□□□□□ -1.57
PTCD3-212	ENST00000477520	SPATA31A1	Q5TZJ5	1347 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	SPATA31A5	Q5VU36	1347 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	SPATA31A7	Q8IWB4	1347 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520		A0A1W2PQ27	194 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520		A0A1W2PQ64	194 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520		A0A1W2PQD8	194 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	CTAGE9	A4FU28	777 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	OR14I1	A6ND48	311 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	HIP1	O00291	1037 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	RAB11FIP3	O75154	756 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	WDHD1	O75717	1129 aa	Predicted RBP	5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	HMOX1	P09601	288 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	TOP1	P11387	765 aa	Known RBP	5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	ZKSCAN1	P17029	563 aa	Predicted RBP	5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	CCT5	P48643	541 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	CHRNE	Q04844	493 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	FAM160A1	Q05DH4	1040 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	EFEMP1	Q12805	493 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	NAA25	Q14CX7	972 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	ZXDC	Q2QGD7	858 aa	Predicted RBP	5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	AMOT	Q4VCS5	1084 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	PLEKHO1	Q53GL0	409 aa	Predicted RBP	5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	SLC6A19	Q695T7	634 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	CAPRIN2	Q6IMN6	1127 aa	Known RBP	5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	TTBK2	Q6IQ55	1244 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	ARMCX5	Q6P1M9	558 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	CEP85	Q6P2H3	762 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	CWC27	Q6UX04	472 aa	Known RBP	5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	TTLL7	Q6ZT98	887 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	TMC6	Q7Z403	805 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	NLRX1	Q86UT6	975 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	SESTD1	Q86VW0	696 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	ZNF513	Q8N8E2	541 aa	Predicted RBP	5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	COG1	Q8WTW3	980 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	LINC01599	Q8WXQ3	324 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	ACSF2	Q96CM8	615 aa	Predicted RBP	5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	SPAG5	Q96R06	1193 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	SH3GL2	Q99962	352 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	LLPH	Q9BRT6	129 aa	Known RBP	5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	CNTD2	Q9H8S5	307 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	TTF2	Q9UNY4	1162 aa	Known RBP	5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	SPG7	Q9UQ90	795 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	ZNF281	Q9Y2X9	895 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	RRP7A	Q9Y3A4	280 aa	Known RBP	5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	COL3A1	P02461	1466 aa	Predicted RBP	5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	BCL9L	Q86UU0	1499 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	KDM6A	O15550	1401 aa	Predicted RBP	5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	SALL3	Q9BXA9	1300 aa		5.23	□□□□□ -1.57
PTCD3-212	ENST00000477520	VWA3A	A6NCI4	1184 aa		5.22	□□□□□ -1.57
PTCD3-212	ENST00000477520	CFAP73	A6NFT4	308 aa		5.22	□□□□□ -1.57
PTCD3-212	ENST00000477520	NDUFAB1	O14561	156 aa		5.22	□□□□□ -1.57
PTCD3-212	ENST00000477520	PRC1	O43663	620 aa		5.22	□□□□□ -1.57
PTCD3-212	ENST00000477520	BUB1B	O60566	1050 aa	Predicted RBP	5.22	□□□□□ -1.57
PTCD3-212	ENST00000477520	SYF2	O95926	243 aa	Known RBP	5.22	□□□□□ -1.57
PTCD3-212	ENST00000477520	GSTA1	P08263	222 aa		5.22	□□□□□ -1.57
PTCD3-212	ENST00000477520	CNGA1	P29973	690 aa		5.22	□□□□□ -1.57
PTCD3-212	ENST00000477520	PRKAR2B	P31323	418 aa		5.22	□□□□□ -1.57
PTCD3-212	ENST00000477520	CCT4	P50991	539 aa	Known RBP	5.22	□□□□□ -1.57
PTCD3-212	ENST00000477520	RAB27A	P51159	221 aa		5.22	□□□□□ -1.57
PTCD3-212	ENST00000477520	CCNH	P51946	323 aa	Predicted RBP	5.22	□□□□□ -1.57
PTCD3-212	ENST00000477520	AK2	P54819	239 aa		5.22	□□□□□ -1.57
PTCD3-212	ENST00000477520	AKAP17A	Q02040	695 aa	Known RBP	5.22	□□□□□ -1.57
PTCD3-212	ENST00000477520	ITIH3	Q06033	890 aa		5.22	□□□□□ -1.57
PTCD3-212	ENST00000477520	XRCC4	Q13426	336 aa		5.22	□□□□□ -1.57
PTCD3-212	ENST00000477520	SEPT2	Q15019	361 aa		5.22	□□□□□ -1.57
PTCD3-212	ENST00000477520	CAMK4	Q16566	473 aa		5.22	□□□□□ -1.57
PTCD3-212	ENST00000477520	LRRC23	Q53EV4	343 aa	Predicted RBP	5.22	□□□□□ -1.57
PTCD3-212	ENST00000477520	LACTB2	Q53H82	288 aa	Predicted RBP	5.22	□□□□□ -1.57
PTCD3-212	ENST00000477520	CMPK2	Q5EBM0	449 aa		5.22	□□□□□ -1.57

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