RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 LSG1Q9H089 658 aaKnown RBP7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 GLT8D2Q9H1C3 349 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 TBC1D22BQ9NU19 505 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 RNF19AQ9NV58 838 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 DZANK1Q9NVP4 752 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 BARHL2Q9NY43 387 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 DACT1Q9NYF0 836 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 SEPT9Q9UHD8 586 aaPredicted RBP7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 PCDHA10Q9Y5I2 948 aa7.55□□□□□ -1.2
RTFDC1-206ENST00000477485 MYH15Q9Y2K3 1946 aa7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 CACNA1HO95180 2353 aa7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 WDR64B1ANS9 1081 aa7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 DHX15O43143 795 aaKnown RBP7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 EOMESO95936 686 aa7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 OATP04181 439 aa7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 MYBP10242 640 aa7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 ID4P47928 161 aa7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 GPC3P51654 580 aa7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 TBC1D8BQ0IIM8 1120 aa7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 MTERF2Q49AM1 385 aa7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 RNF20Q5VTR2 975 aa7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 FAM43BQ6ZT52 329 aaPredicted RBP7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 CCDC149Q6ZUS6 474 aa7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 SGMS1Q86VZ5 419 aa7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 ADSSL1Q8N142 457 aa7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 REXO1Q8N1G1 1221 aaKnown RBP7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 PLCD3Q8N3E9 789 aa7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 ESYT1Q9BSJ8 1104 aa7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 GCOM2Q9BZD3 368 aaPredicted RBP7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 C6orf50Q9HD87 102 aa7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 CYP26B1Q9NR63 512 aa7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 NRBP2Q9NSY0 501 aa7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 PIN4Q9Y237 131 aaKnown RBP7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 MAFBQ9Y5Q3 323 aaPredicted RBP7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 CFAP54Q96N23 3096 aa7.54□□□□□ -1.2
RTFDC1-206ENST00000477485 IGLV3-22A0A075B6J6 115 aa7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 PROB1E7EW31 1015 aa7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 C2CD2LO14523 706 aa7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 GAS7O60861 476 aa7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 CFHP08603 1231 aa7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 DARSP14868 501 aaKnown RBP7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 SFPQP23246 707 aaKnown RBP eCLIP7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 KLRC2P26717 231 aa7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 GBP2P32456 591 aaPredicted RBP7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 NBL1P41271 181 aa7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 CLK2P49760 499 aaKnown RBP7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 FOXK2Q01167 660 aa7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 AKAP17AQ02040 695 aaKnown RBP7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 GLB1LQ6UWU2 654 aa7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 CATSPER4Q7RTX7 472 aa7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 TMEM173Q86WV6 379 aaPredicted RBP7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 RHPN2Q8IUC4 686 aa7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 ZDHHC14Q8IZN3 488 aa7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 SIX5Q8N196 739 aa7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 CCDC12Q8WUD4 166 aaPredicted RBP7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 NLRP4Q96MN2 994 aa7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 FAM193BQ96PV7 902 aaPredicted RBP7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 SH2D3AQ9BRG2 576 aa7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 TEKT3Q9BXF9 490 aa7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 ZBP1Q9H171 429 aa7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 ADAMTS10Q9H324 1103 aa7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 SFXN1Q9H9B4 322 aa7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 DISC1Q9NRI5 854 aa7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 BRPF3Q9ULD4 1205 aa7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 FAM186AA6NE01 2351 aa7.53□□□□□ -1.2
RTFDC1-206ENST00000477485 PTPRZ1P23471 2315 aaPredicted RBP7.52□□□□□ -1.2
RTFDC1-206ENST00000477485 A0A087WZ62 844 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 A0A0U1RQF3 1178 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 TMEM150BA6NC51 233 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 CYP3A4P08684 503 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 CTSAP10619 480 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 SKIP12755 728 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 GNA11P29992 359 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 CDC27P30260 824 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 PHKA2P46019 1235 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 VASPP50552 380 aaPredicted RBP7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 DNM2P50570 870 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 CLCN5P51795 746 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 TDGQ13569 410 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 GIT2Q14161 759 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 NECTIN1Q15223 517 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 ANGPT1Q15389 498 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 UGCGQ16739 394 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 PFKFB3Q16875 520 aaPredicted RBP7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 NOMO2Q5JPE7 1267 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 SPECC1Q5M775 1068 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 LRCH2Q5VUJ6 765 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 CWF19L1Q69YN2 538 aaKnown RBP7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 OTOP3Q7RTS5 596 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 MIER3Q7Z3K6 550 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 DDX53Q86TM3 631 aaKnown RBP7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 PPFIBP1Q86W92 1011 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 FEZF2Q8TBJ5 459 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 URGCPQ8TCY9 931 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 GJA10Q969M2 543 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 IGSF21Q96ID5 467 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 CCDC136Q96JN2 1154 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 FDXACB1Q9BRP7 624 aaPredicted RBP7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 EMILIN2Q9BXX0 1053 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 TBC1D13Q9NVG8 400 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms