RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 DNAJC19Q96DA6 116 aa17.6■□□□□ 0.41
COPS3-207ENST00000477299 GDF15Q99988 308 aa17.6■□□□□ 0.41
COPS3-207ENST00000477299 LBHD1Q9BQE6 289 aaPredicted RBP17.6■□□□□ 0.41
COPS3-207ENST00000477299 JPH2Q9BR39 696 aaPredicted RBP17.6■□□□□ 0.41
COPS3-207ENST00000477299 KIFC3Q9BVG8 833 aa17.6■□□□□ 0.41
COPS3-207ENST00000477299 IL23AQ9NPF7 189 aa17.6■□□□□ 0.41
COPS3-207ENST00000477299 USP20Q9Y2K6 914 aa17.6■□□□□ 0.41
COPS3-207ENST00000477299 ADGRA3Q8IWK6 1321 aa17.59■□□□□ 0.41
COPS3-207ENST00000477299 GOLGA6L4A6NEF3 574 aa17.59■□□□□ 0.41
COPS3-207ENST00000477299 ZNF202O95125 648 aa17.59■□□□□ 0.41
COPS3-207ENST00000477299 CXCL10P02778 98 aa17.59■□□□□ 0.41
COPS3-207ENST00000477299 GUCY2CP25092 1073 aa17.59■□□□□ 0.41
COPS3-207ENST00000477299 SYKP43405 635 aa17.59■□□□□ 0.41
COPS3-207ENST00000477299 CRYBB1P53674 252 aaPredicted RBP17.59■□□□□ 0.41
COPS3-207ENST00000477299 C9orf50Q5SZB4 431 aa17.59■□□□□ 0.41
COPS3-207ENST00000477299 FAM228AQ86W67 206 aa17.59■□□□□ 0.41
COPS3-207ENST00000477299 EXOC8Q8IYI6 725 aa17.59■□□□□ 0.41
COPS3-207ENST00000477299 FMR1NBQ8N0W7 255 aaPredicted RBP17.59■□□□□ 0.41
COPS3-207ENST00000477299 DDX12PQ92771 950 aa17.59■□□□□ 0.41
COPS3-207ENST00000477299 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.59■□□□□ 0.414e-6■□□□□ 10.2
COPS3-207ENST00000477299 BLZF1Q9H2G9 400 aa17.59■□□□□ 0.41
COPS3-207ENST00000477299 KBTBD4Q9NVX7 518 aa17.59■□□□□ 0.41
COPS3-207ENST00000477299 GAS2O43903 313 aaKnown RBP17.58■□□□□ 0.4
COPS3-207ENST00000477299 NR1I2O75469 434 aa17.58■□□□□ 0.4
COPS3-207ENST00000477299 EDN1P05305 212 aa17.58■□□□□ 0.4
COPS3-207ENST00000477299 PRR29P0C7W0 189 aa17.58■□□□□ 0.4
COPS3-207ENST00000477299 DARSP14868 501 aaKnown RBP17.58■□□□□ 0.4
COPS3-207ENST00000477299 PEX3P56589 373 aa17.58■□□□□ 0.4
COPS3-207ENST00000477299 PLEKHG4Q58EX7 1191 aa17.58■□□□□ 0.4
COPS3-207ENST00000477299 TMEM240Q5SV17 173 aa17.58■□□□□ 0.4
COPS3-207ENST00000477299 RTN4RL1Q86UN2 441 aaPredicted RBP17.58■□□□□ 0.4
COPS3-207ENST00000477299 PAGE5Q96GU1 130 aa17.58■□□□□ 0.4
COPS3-207ENST00000477299 SCLT1Q96NL6 688 aa17.58■□□□□ 0.4
COPS3-207ENST00000477299 TMX1Q9H3N1 280 aa17.58■□□□□ 0.4
COPS3-207ENST00000477299 LMBRD1Q9NUN5 540 aa17.58■□□□□ 0.4
COPS3-207ENST00000477299 PADI3Q9ULW8 664 aa17.58■□□□□ 0.4
COPS3-207ENST00000477299 LRRIQ4A6NIV6 560 aa17.57■□□□□ 0.4
COPS3-207ENST00000477299 TTLL13PA6NNM8 815 aa17.57■□□□□ 0.4
COPS3-207ENST00000477299 M0QZ92 97 aa17.57■□□□□ 0.4
COPS3-207ENST00000477299 KRT18P05783 430 aaKnown RBP17.57■□□□□ 0.4
COPS3-207ENST00000477299 SLFN14P0C7P3 912 aa17.57■□□□□ 0.4
COPS3-207ENST00000477299 EIF4BP23588 611 aaKnown RBP17.57■□□□□ 0.4
COPS3-207ENST00000477299 PTENP60484 403 aa17.57■□□□□ 0.4
COPS3-207ENST00000477299 PPIGQ13427 754 aaKnown RBP eCLIP17.57■□□□□ 0.4
COPS3-207ENST00000477299 CUL4BQ13620 913 aa17.57■□□□□ 0.4
COPS3-207ENST00000477299 KRBA2Q6ZNG9 492 aa17.57■□□□□ 0.4
COPS3-207ENST00000477299 OTOP2Q7RTS6 562 aa17.57■□□□□ 0.4
COPS3-207ENST00000477299 HPS3Q969F9 1004 aa17.57■□□□□ 0.4
COPS3-207ENST00000477299 ZHX3Q9H4I2 956 aa17.57■□□□□ 0.4
COPS3-207ENST00000477299 CXXC1Q9P0U4 656 aaPredicted RBP17.57■□□□□ 0.4
COPS3-207ENST00000477299 ST3GAL5Q9UNP4 418 aa17.57■□□□□ 0.4
COPS3-207ENST00000477299 GBF1Q92538 1859 aa17.56■□□□□ 0.4
COPS3-207ENST00000477299 ASAP2O43150 1006 aa17.56■□□□□ 0.4
COPS3-207ENST00000477299 MGEA5O60502 916 aa17.56■□□□□ 0.4
COPS3-207ENST00000477299 RPS6KA5O75582 802 aa17.56■□□□□ 0.4
COPS3-207ENST00000477299 NPTX2P47972 431 aa17.56■□□□□ 0.4
COPS3-207ENST00000477299 NFX1Q12986 1120 aaKnown RBP17.56■□□□□ 0.4
COPS3-207ENST00000477299 MXD4Q14582 209 aaPredicted RBP17.56■□□□□ 0.4
COPS3-207ENST00000477299 SHHQ15465 462 aa17.56■□□□□ 0.4
COPS3-207ENST00000477299 CHRDL2Q6WN34 429 aa17.56■□□□□ 0.4
COPS3-207ENST00000477299 TSHZ1Q6ZSZ6 1077 aa17.56■□□□□ 0.4
COPS3-207ENST00000477299 ZNF410Q86VK4 478 aa17.56■□□□□ 0.4
COPS3-207ENST00000477299 LINC01599Q8WXQ3 324 aa17.56■□□□□ 0.4
COPS3-207ENST00000477299 KIFAP3Q92845 792 aa17.56■□□□□ 0.4
COPS3-207ENST00000477299 ERCC4Q92889 916 aaPredicted RBP17.56■□□□□ 0.4
COPS3-207ENST00000477299 FGFBP2Q9BYJ0 223 aa17.56■□□□□ 0.4
COPS3-207ENST00000477299 IFIH1Q9BYX4 1025 aaKnown RBP17.56■□□□□ 0.4
COPS3-207ENST00000477299 GCOM2Q9BZD3 368 aaPredicted RBP17.56■□□□□ 0.4
COPS3-207ENST00000477299 TRIM9Q9C026 710 aa17.56■□□□□ 0.4
COPS3-207ENST00000477299 UBE2OQ9C0C9 1292 aaKnown RBP17.56■□□□□ 0.4
COPS3-207ENST00000477299 ERVK-5Q9HDB9 667 aa17.56■□□□□ 0.4
COPS3-207ENST00000477299 TBC1D7Q9P0N9 293 aa17.56■□□□□ 0.4
COPS3-207ENST00000477299 CCDC169A6NNP5 214 aa17.55■□□□□ 0.4
COPS3-207ENST00000477299 SLC16A4O15374 487 aa17.55■□□□□ 0.4
COPS3-207ENST00000477299 FGBP02675 491 aa17.55■□□□□ 0.4
COPS3-207ENST00000477299 NMT1P30419 496 aaKnown RBP17.55■□□□□ 0.4
COPS3-207ENST00000477299 RFC2P35250 354 aa17.55■□□□□ 0.4
COPS3-207ENST00000477299 MBTD1Q05BQ5 628 aa17.55■□□□□ 0.4
COPS3-207ENST00000477299 TAS1R3Q7RTX0 852 aa17.55■□□□□ 0.4
COPS3-207ENST00000477299 TMCO2Q7Z6W1 182 aaPredicted RBP17.55■□□□□ 0.4
COPS3-207ENST00000477299 MYCT1Q8N699 235 aa17.55■□□□□ 0.4
COPS3-207ENST00000477299 FIZ1Q96SL8 496 aa17.55■□□□□ 0.4
COPS3-207ENST00000477299 C7orf25Q9BPX7 421 aa17.55■□□□□ 0.4
COPS3-207ENST00000477299 TNMDQ9H2S6 317 aa17.55■□□□□ 0.4
COPS3-207ENST00000477299 PRO3102Q9H379 93 aa17.55■□□□□ 0.4
COPS3-207ENST00000477299 CUEDC2Q9H467 287 aa17.55■□□□□ 0.4
COPS3-207ENST00000477299 KCND2Q9NZV8 630 aa17.55■□□□□ 0.4
COPS3-207ENST00000477299 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.54■□□□□ 0.4
COPS3-207ENST00000477299 B4GALT5O43286 388 aa17.54■□□□□ 0.4
COPS3-207ENST00000477299 FAM13AO94988 1023 aa17.54■□□□□ 0.4
COPS3-207ENST00000477299 RPLP2P05387 115 aaKnown RBP17.54■□□□□ 0.4
COPS3-207ENST00000477299 PLS3P13797 630 aa17.54■□□□□ 0.4
COPS3-207ENST00000477299 IDEP14735 1019 aa17.54■□□□□ 0.4
COPS3-207ENST00000477299 ZNF131P52739 623 aa17.54■□□□□ 0.4
COPS3-207ENST00000477299 FAM160A1Q05DH4 1040 aa17.54■□□□□ 0.4
COPS3-207ENST00000477299 PAK2Q13177 524 aa17.54■□□□□ 0.4
COPS3-207ENST00000477299 AMHR2Q16671 573 aa17.54■□□□□ 0.4
COPS3-207ENST00000477299 CSPP1Q1MSJ5 1256 aa17.54■□□□□ 0.4
COPS3-207ENST00000477299 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.54■□□□□ 0.4
COPS3-207ENST00000477299 CDR2LQ86X02 465 aaPredicted RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms