RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 GYPCP04921 128 aa15.87■□□□□ 0.13
COL4A6-206ENST00000477085 ADKP55263 362 aaKnown RBP15.87■□□□□ 0.13
COL4A6-206ENST00000477085 FCGRTP55899 365 aa15.87■□□□□ 0.13
COL4A6-206ENST00000477085 GSDMDP57764 484 aa15.87■□□□□ 0.13
COL4A6-206ENST00000477085 RBL2Q08999 1139 aa15.87■□□□□ 0.13
COL4A6-206ENST00000477085 ALCAMQ13740 583 aa15.87■□□□□ 0.13
COL4A6-206ENST00000477085 MAN2A1Q16706 1144 aa15.87■□□□□ 0.13
COL4A6-206ENST00000477085 CCDC155Q8N6L0 562 aa15.87■□□□□ 0.13
COL4A6-206ENST00000477085 TC2NQ8N9U0 490 aa15.87■□□□□ 0.13
COL4A6-206ENST00000477085 TRPV1Q8NER1 839 aa15.87■□□□□ 0.13
COL4A6-206ENST00000477085 ACCSQ96QU6 501 aa15.87■□□□□ 0.13
COL4A6-206ENST00000477085 RRAGDQ9NQL2 400 aaPredicted RBP15.87■□□□□ 0.13
COL4A6-206ENST00000477085 ERAP1Q9NZ08 941 aa15.87■□□□□ 0.13
COL4A6-206ENST00000477085 CENPFP49454 3210 aa15.87■□□□□ 0.13
COL4A6-206ENST00000477085 ANKRD63C9JTQ0 380 aa15.87■□□□□ 0.13
COL4A6-206ENST00000477085 DYNC1LI2O43237 492 aaPredicted RBP15.87■□□□□ 0.13
COL4A6-206ENST00000477085 GNA14O95837 355 aa15.87■□□□□ 0.13
COL4A6-206ENST00000477085 VEGFBP49765 207 aa15.87■□□□□ 0.13
COL4A6-206ENST00000477085 DNM2P50570 870 aa15.87■□□□□ 0.13
COL4A6-206ENST00000477085 SMTNP53814 917 aa15.87■□□□□ 0.13
COL4A6-206ENST00000477085 TBC1D8BQ0IIM8 1120 aa15.87■□□□□ 0.13
COL4A6-206ENST00000477085 IRF5Q13568 498 aa15.87■□□□□ 0.13
COL4A6-206ENST00000477085 CCDC40Q4G0X9 1142 aa15.87■□□□□ 0.13
COL4A6-206ENST00000477085 SYCP3Q8IZU3 236 aa15.87■□□□□ 0.13
COL4A6-206ENST00000477085 C17orf53Q8N3J3 647 aaPredicted RBP15.87■□□□□ 0.13
COL4A6-206ENST00000477085 ZSWIM2Q8NEG5 633 aa15.87■□□□□ 0.13
COL4A6-206ENST00000477085 TMEM206Q9H813 350 aa15.87■□□□□ 0.13
COL4A6-206ENST00000477085 ARHGAP28Q9P2N2 729 aa15.87■□□□□ 0.13
COL4A6-206ENST00000477085 A0A1W2PQC6 194 aa15.86■□□□□ 0.13
COL4A6-206ENST00000477085 PES1O00541 588 aaKnown RBP15.86■□□□□ 0.13
COL4A6-206ENST00000477085 HBP1O60381 514 aa15.86■□□□□ 0.13
COL4A6-206ENST00000477085 ADSSP30520 456 aa15.86■□□□□ 0.13
COL4A6-206ENST00000477085 FLT3LGP49771 235 aa15.86■□□□□ 0.13
COL4A6-206ENST00000477085 FXR1P51114 621 aaKnown RBP eCLIP15.86■□□□□ 0.13
COL4A6-206ENST00000477085 SLC39A4Q6P5W5 647 aa15.86■□□□□ 0.13
COL4A6-206ENST00000477085 FRMD5Q7Z6J6 570 aa15.86■□□□□ 0.13
COL4A6-206ENST00000477085 SLC9A9Q8IVB4 645 aa15.86■□□□□ 0.13
COL4A6-206ENST00000477085 MAP4K3Q8IVH8 894 aa15.86■□□□□ 0.13
COL4A6-206ENST00000477085 LRRC71Q8N4P6 559 aa15.86■□□□□ 0.13
COL4A6-206ENST00000477085 TMEM174Q8WUU8 243 aa15.86■□□□□ 0.13
COL4A6-206ENST00000477085 CPLX3Q8WVH0 158 aa15.86■□□□□ 0.13
COL4A6-206ENST00000477085 PRPF31Q8WWY3 499 aaKnown RBP15.86■□□□□ 0.13
COL4A6-206ENST00000477085 TRIB2Q92519 343 aa15.86■□□□□ 0.13
COL4A6-206ENST00000477085 CBWD1Q9BRT8 395 aa15.86■□□□□ 0.13
COL4A6-206ENST00000477085 TMX1Q9H3N1 280 aa15.86■□□□□ 0.13
COL4A6-206ENST00000477085 RNF186Q9NXI6 227 aa15.86■□□□□ 0.13
COL4A6-206ENST00000477085 TRPC6Q9Y210 931 aa15.86■□□□□ 0.13
COL4A6-206ENST00000477085 USP20Q9Y2K6 914 aa15.86■□□□□ 0.13
COL4A6-206ENST00000477085 MGAMO43451 1857 aa15.86■□□□□ 0.13
COL4A6-206ENST00000477085 A6NJR5 290 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 TRPA1O75762 1119 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 XRCC5P13010 732 aaKnown RBP15.85■□□□□ 0.13
COL4A6-206ENST00000477085 INSRRP14616 1297 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 RPL13P26373 211 aaKnown RBP15.85■□□□□ 0.13
COL4A6-206ENST00000477085 CYP2J2P51589 502 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 PRKCZQ05513 592 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 SYCP1Q15431 976 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 HS2ST1Q7LGA3 356 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 TMEM139Q8IV31 216 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 SLC17A8Q8NDX2 589 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 IFT74Q96LB3 600 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 PCIF1Q9H4Z3 704 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 SUGCTQ9HAC7 445 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 SIK3Q9Y2K2 1263 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 PPME1Q9Y570 386 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 H3BRB1 525 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 SLC16A3O15427 465 aaKnown RBP15.85■□□□□ 0.13
COL4A6-206ENST00000477085 EDN1P05305 212 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 GJB1P08034 283 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 CASP14P31944 242 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 KCNMA1Q12791 1236 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 TRIM32Q13049 653 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 CAPSQ13938 189 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 REM2Q8IYK8 340 aaPredicted RBP15.85■□□□□ 0.13
COL4A6-206ENST00000477085 CCDC150Q8NCX0 1101 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 KIAA1524Q8TCG1 905 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 KCNN1Q92952 543 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 ERGIC2Q96RQ1 377 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 CFHR5Q9BXR6 569 aa15.85■□□□□ 0.13
COL4A6-206ENST00000477085 TUT1Q9H6E5 874 aaKnown RBP15.85■□□□□ 0.13
COL4A6-206ENST00000477085 C22orf31O95567 290 aa15.84■□□□□ 0.13
COL4A6-206ENST00000477085 SKILP12757 684 aa15.84■□□□□ 0.13
COL4A6-206ENST00000477085 SFPQP23246 707 aaKnown RBP eCLIP15.84■□□□□ 0.13
COL4A6-206ENST00000477085 NAMPTP43490 491 aa15.84■□□□□ 0.13
COL4A6-206ENST00000477085 SP3Q02447 781 aa15.84■□□□□ 0.13
COL4A6-206ENST00000477085 DGKDQ16760 1214 aa15.84■□□□□ 0.13
COL4A6-206ENST00000477085 IER5Q5VY09 327 aa15.84■□□□□ 0.13
COL4A6-206ENST00000477085 TLK2Q86UE8 772 aa15.84■□□□□ 0.13
COL4A6-206ENST00000477085 C12orf56Q8IXR9 622 aa15.84■□□□□ 0.13
COL4A6-206ENST00000477085 GOLGA5Q8TBA6 731 aa15.84■□□□□ 0.13
COL4A6-206ENST00000477085 KAT2BQ92831 832 aa15.84■□□□□ 0.13
COL4A6-206ENST00000477085 HVCN1Q96D96 273 aa15.84■□□□□ 0.13
COL4A6-206ENST00000477085 TTYH3Q9C0H2 523 aa15.84■□□□□ 0.13
COL4A6-206ENST00000477085 ARMCX3Q9UH62 379 aaPredicted RBP15.84■□□□□ 0.13
COL4A6-206ENST00000477085 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.84■□□□□ 0.13
COL4A6-206ENST00000477085 EPHB6O15197 1021 aa15.83■□□□□ 0.12
COL4A6-206ENST00000477085 CNGA1P29973 690 aa15.83■□□□□ 0.12
COL4A6-206ENST00000477085 IGBP1P78318 339 aa15.83■□□□□ 0.12
COL4A6-206ENST00000477085 KCNH2Q12809 1159 aa15.83■□□□□ 0.12
COL4A6-206ENST00000477085 MYBPC2Q14324 1141 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms