RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 IGBP1P78318 339 aa31.7■■■□□ 2.66
VEGFA-211ENST00000476772 TMC6Q7Z403 805 aa31.7■■■□□ 2.66
VEGFA-211ENST00000476772 VSTM4Q8IW00 320 aa31.7■■■□□ 2.66
VEGFA-211ENST00000476772 LRRC71Q8N4P6 559 aa31.7■■■□□ 2.66
VEGFA-211ENST00000476772 TUBGCP2Q9BSJ2 902 aa31.7■■■□□ 2.66
VEGFA-211ENST00000476772 SUGCTQ9HAC7 445 aa31.7■■■□□ 2.66
VEGFA-211ENST00000476772 SAGE1Q9NXZ1 904 aa31.7■■■□□ 2.66
VEGFA-211ENST00000476772 GOLGA6L6A8MZA4 724 aa31.69■■■□□ 2.66
VEGFA-211ENST00000476772 GAS2O43903 313 aaKnown RBP31.69■■■□□ 2.66
VEGFA-211ENST00000476772 CPT1AP50416 773 aa31.69■■■□□ 2.66
VEGFA-211ENST00000476772 CACNB2Q08289 660 aaPredicted RBP31.69■■■□□ 2.66
VEGFA-211ENST00000476772 MKRN4PQ13434 485 aaPredicted RBP31.69■■■□□ 2.66
VEGFA-211ENST00000476772 HS2ST1Q7LGA3 356 aa31.69■■■□□ 2.66
VEGFA-211ENST00000476772 HVCN1Q96D96 273 aa31.69■■■□□ 2.66
VEGFA-211ENST00000476772 JPH2Q9BR39 696 aaPredicted RBP31.69■■■□□ 2.66
VEGFA-211ENST00000476772 TBX20Q9UMR3 447 aa31.69■■■□□ 2.66
VEGFA-211ENST00000476772 DUSP11O75319 330 aaKnown RBP31.68■■■□□ 2.66
VEGFA-211ENST00000476772 PRKCSHP14314 528 aaPredicted RBP31.68■■■□□ 2.66
VEGFA-211ENST00000476772 NAMPTP43490 491 aa31.68■■■□□ 2.66
VEGFA-211ENST00000476772 BEX3Q00994 111 aa31.68■■■□□ 2.66
VEGFA-211ENST00000476772 PPP2R5AQ15172 486 aa31.68■■■□□ 2.66
VEGFA-211ENST00000476772 IER5Q5VY09 327 aa31.68■■■□□ 2.66
VEGFA-211ENST00000476772 TCP11Q8WWU5 503 aa31.68■■■□□ 2.66
VEGFA-211ENST00000476772 ZBTB10Q96DT7 871 aa31.68■■■□□ 2.66
VEGFA-211ENST00000476772 ERO1AQ96HE7 468 aa31.68■■■□□ 2.66
VEGFA-211ENST00000476772 AGPAT3Q9NRZ7 376 aa31.68■■■□□ 2.66
VEGFA-211ENST00000476772 ARHGAP28Q9P2N2 729 aa31.68■■■□□ 2.66
VEGFA-211ENST00000476772 COL1A2P08123 1366 aa31.68■■■□□ 2.66
VEGFA-211ENST00000476772 FKTNO75072 461 aa31.67■■■□□ 2.66
VEGFA-211ENST00000476772 C22orf31O95567 290 aa31.67■■■□□ 2.66
VEGFA-211ENST00000476772 CNGA1P29973 690 aa31.67■■■□□ 2.66
VEGFA-211ENST00000476772 NFIL3Q16649 462 aa31.67■■■□□ 2.66
VEGFA-211ENST00000476772 KCNG1Q9UIX4 513 aa31.67■■■□□ 2.66
VEGFA-211ENST00000476772 F2P00734 622 aa31.67■■■□□ 2.66
VEGFA-211ENST00000476772 RPL13P26373 211 aaKnown RBP31.67■■■□□ 2.66
VEGFA-211ENST00000476772 CCDC40Q4G0X9 1142 aa31.67■■■□□ 2.66
VEGFA-211ENST00000476772 MAP4K3Q8IVH8 894 aa31.67■■■□□ 2.66
VEGFA-211ENST00000476772 GOLGA5Q8TBA6 731 aa31.67■■■□□ 2.66
VEGFA-211ENST00000476772 ZNF296Q8WUU4 475 aaPredicted RBP31.67■■■□□ 2.66
VEGFA-211ENST00000476772 LRRIQ4A6NIV6 560 aa31.66■■■□□ 2.66
VEGFA-211ENST00000476772 GNA14O95837 355 aa31.66■■■□□ 2.66
VEGFA-211ENST00000476772 CAPSQ13938 189 aa31.66■■■□□ 2.66
VEGFA-211ENST00000476772 BRDTQ58F21 947 aaPredicted RBP31.66■■■□□ 2.66
VEGFA-211ENST00000476772 PRPF31Q8WWY3 499 aaKnown RBP31.66■■■□□ 2.66
VEGFA-211ENST00000476772 KAT2BQ92831 832 aa31.66■■■□□ 2.66
VEGFA-211ENST00000476772 PCNTO95613 3336 aa31.66■■■□□ 2.66
VEGFA-211ENST00000476772 LGALS16A8MUM7 142 aa31.65■■■□□ 2.66
VEGFA-211ENST00000476772 H0YCG3 227 aa31.65■■■□□ 2.66
VEGFA-211ENST00000476772 SEPT4O43236 478 aa31.65■■■□□ 2.66
VEGFA-211ENST00000476772 ADCY3O60266 1144 aa31.65■■■□□ 2.66
VEGFA-211ENST00000476772 GNRH1P01148 92 aa31.65■■■□□ 2.66
VEGFA-211ENST00000476772 PRKAR2AP13861 404 aaKnown RBP31.65■■■□□ 2.66
VEGFA-211ENST00000476772 PPFIA1Q13136 1202 aa31.65■■■□□ 2.66
VEGFA-211ENST00000476772 FSCN1Q16658 493 aaKnown RBP31.65■■■□□ 2.66
VEGFA-211ENST00000476772 EFCAB12Q6NXP0 572 aa31.65■■■□□ 2.66
VEGFA-211ENST00000476772 CCDC186Q7Z3E2 898 aa31.65■■■□□ 2.66
VEGFA-211ENST00000476772 PSPC1Q8WXF1 523 aaKnown RBP31.65■■■□□ 2.66
VEGFA-211ENST00000476772 NOC4LQ9BVI4 516 aaKnown RBP31.65■■■□□ 2.66
VEGFA-211ENST00000476772 EXOC7Q9UPT5 735 aa31.65■■■□□ 2.66
VEGFA-211ENST00000476772 TISP43B9A030 160 aa31.64■■■□□ 2.66
VEGFA-211ENST00000476772 TPM2P07951 284 aa31.64■■■□□ 2.66
VEGFA-211ENST00000476772 MYL3P08590 195 aa31.64■■■□□ 2.66
VEGFA-211ENST00000476772 CLCN3P51790 818 aa31.64■■■□□ 2.66
VEGFA-211ENST00000476772 MARSP56192 900 aaKnown RBP31.64■■■□□ 2.66
VEGFA-211ENST00000476772 MIIPQ5JXC2 388 aa31.64■■■□□ 2.66
VEGFA-211ENST00000476772 TAS1R3Q7RTX0 852 aa31.64■■■□□ 2.66
VEGFA-211ENST00000476772 METTL13Q8N6R0 699 aa31.64■■■□□ 2.66
VEGFA-211ENST00000476772 DEPTORQ8TB45 409 aa31.64■■■□□ 2.66
VEGFA-211ENST00000476772 RAET1EQ8TD07 263 aa31.64■■■□□ 2.66
VEGFA-211ENST00000476772 SIP14410 1827 aa31.64■■■□□ 2.66
VEGFA-211ENST00000476772 MYADML2A6NDP7 307 aa31.64■■■□□ 2.65
VEGFA-211ENST00000476772 PES1O00541 588 aaKnown RBP31.64■■■□□ 2.65
VEGFA-211ENST00000476772 KLRC1P26715 233 aa31.64■■■□□ 2.65
VEGFA-211ENST00000476772 CCND3P30281 292 aaPredicted RBP31.64■■■□□ 2.65
VEGFA-211ENST00000476772 PBX1P40424 430 aa31.64■■■□□ 2.65
VEGFA-211ENST00000476772 GRIK4Q16099 956 aa31.64■■■□□ 2.65
VEGFA-211ENST00000476772 SUCLA2Q9P2R7 463 aaPredicted RBP31.64■■■□□ 2.65
VEGFA-211ENST00000476772 IMPACTQ9P2X3 320 aa31.64■■■□□ 2.65
VEGFA-211ENST00000476772 AKAP3O75969 853 aa31.63■■■□□ 2.65
VEGFA-211ENST00000476772 CASP4P49662 377 aa31.63■■■□□ 2.65
VEGFA-211ENST00000476772 CHMP4BP1P59074 171 aa31.63■■■□□ 2.65
VEGFA-211ENST00000476772 UBXN1Q04323 297 aa31.63■■■□□ 2.65
VEGFA-211ENST00000476772 LAMTOR4Q0VGL1 99 aa31.63■■■□□ 2.65
VEGFA-211ENST00000476772 MAN2A1Q16706 1144 aa31.63■■■□□ 2.65
VEGFA-211ENST00000476772 KIAA0753Q2KHM9 967 aa31.63■■■□□ 2.65
VEGFA-211ENST00000476772 CEP135Q66GS9 1140 aa31.63■■■□□ 2.65
VEGFA-211ENST00000476772 RETREG2Q8NC44 543 aa31.63■■■□□ 2.65
VEGFA-211ENST00000476772 DMAC2Q9NW81 257 aa31.63■■■□□ 2.65
VEGFA-211ENST00000476772 EVPLQ92817 2033 aa31.62■■■□□ 2.65
VEGFA-211ENST00000476772 MAGEB2O15479 319 aa31.62■■■□□ 2.65
VEGFA-211ENST00000476772 HMGCRP04035 888 aa31.62■■■□□ 2.65
VEGFA-211ENST00000476772 C6orf222P0C671 652 aaPredicted RBP31.62■■■□□ 2.65
VEGFA-211ENST00000476772 ABCD1P33897 745 aa31.62■■■□□ 2.65
VEGFA-211ENST00000476772 CYP2J2P51589 502 aa31.62■■■□□ 2.65
VEGFA-211ENST00000476772 GJA9P57773 515 aa31.62■■■□□ 2.65
VEGFA-211ENST00000476772 MXD4Q14582 209 aaPredicted RBP31.62■■■□□ 2.65
VEGFA-211ENST00000476772 MFSD10Q14728 455 aa31.62■■■□□ 2.65
VEGFA-211ENST00000476772 KCNN1Q92952 543 aa31.62■■■□□ 2.65
VEGFA-211ENST00000476772 CGNQ9P2M7 1197 aaKnown RBP31.62■■■□□ 2.65
VEGFA-211ENST00000476772 SLC16A3O15427 465 aaKnown RBP31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms