RNA–Protein interactions for RNA: ENST00000476743.5

MSL3-213, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-213ENST00000476743 LARP1BQ659C4 914 aaKnown RBP15.3■□□□□ 0.04
MSL3-213ENST00000476743 FERMT3Q86UX7 667 aa15.3■□□□□ 0.04
MSL3-213ENST00000476743 IFNLR1Q8IU57 520 aaPredicted RBP15.3■□□□□ 0.04
MSL3-213ENST00000476743 ERMNQ8TAM6 284 aa15.3■□□□□ 0.04
MSL3-213ENST00000476743 NACC1Q96RE7 527 aa15.3■□□□□ 0.04
MSL3-213ENST00000476743 SPTBN5Q9NRC6 3674 aaKnown RBP15.3■□□□□ 0.04
MSL3-213ENST00000476743 LRFN2Q9ULH4 789 aa15.3■□□□□ 0.04
MSL3-213ENST00000476743 XIRP2A4UGR9 3374 aa15.3■□□□□ 0.04
MSL3-213ENST00000476743 A0A0U1RQF3 1178 aa15.29■□□□□ 0.04
MSL3-213ENST00000476743 CSDE1O75534 798 aaKnown RBP15.29■□□□□ 0.04
MSL3-213ENST00000476743 ATP2C1P98194 919 aaPredicted RBP15.29■□□□□ 0.04
MSL3-213ENST00000476743 POU5F1BQ06416 359 aa15.29■□□□□ 0.04
MSL3-213ENST00000476743 MXD4Q14582 209 aaPredicted RBP15.29■□□□□ 0.04
MSL3-213ENST00000476743 HAUS3Q68CZ6 603 aa15.29■□□□□ 0.04
MSL3-213ENST00000476743 MCTP1Q6DN14 999 aa15.29■□□□□ 0.04
MSL3-213ENST00000476743 SRGAP1Q7Z6B7 1085 aa15.29■□□□□ 0.04
MSL3-213ENST00000476743 ZNF598Q86UK7 904 aaKnown RBP15.29■□□□□ 0.04
MSL3-213ENST00000476743 ECHDC2Q86YB7 292 aa15.29■□□□□ 0.04
MSL3-213ENST00000476743 PIGOQ8TEQ8 1089 aa15.29■□□□□ 0.04
MSL3-213ENST00000476743 INTS4Q96HW7 963 aaKnown RBP15.29■□□□□ 0.04
MSL3-213ENST00000476743 NLRP4Q96MN2 994 aa15.29■□□□□ 0.04
MSL3-213ENST00000476743 PLVAPQ9BX97 442 aa15.29■□□□□ 0.04
MSL3-213ENST00000476743 ATP6V0A4Q9HBG4 840 aa15.29■□□□□ 0.04
MSL3-213ENST00000476743 RNF19AQ9NV58 838 aa15.29■□□□□ 0.04
MSL3-213ENST00000476743 DACT1Q9NYF0 836 aa15.29■□□□□ 0.04
MSL3-213ENST00000476743 STK24Q9Y6E0 443 aa15.29■□□□□ 0.04
MSL3-213ENST00000476743 MRPL42Q9Y6G3 142 aaKnown RBP15.29■□□□□ 0.04
MSL3-213ENST00000476743 EOMESO95936 686 aa15.28■□□□□ 0.04
MSL3-213ENST00000476743 CTNNB1P35222 781 aa15.28■□□□□ 0.04
MSL3-213ENST00000476743 ARL2P36404 184 aa15.28■□□□□ 0.04
MSL3-213ENST00000476743 GATMP50440 423 aa15.28■□□□□ 0.04
MSL3-213ENST00000476743 GPM6BQ13491 265 aa15.28■□□□□ 0.04
MSL3-213ENST00000476743 CCDC85BQ15834 202 aaPredicted RBP15.28■□□□□ 0.04
MSL3-213ENST00000476743 IL17AQ16552 155 aa15.28■□□□□ 0.04
MSL3-213ENST00000476743 POTEGQ6S5H5 508 aa15.28■□□□□ 0.04
MSL3-213ENST00000476743 PPM1EQ8WY54 764 aa15.28■□□□□ 0.04
MSL3-213ENST00000476743 P2RX5Q93086 422 aa15.28■□□□□ 0.04
MSL3-213ENST00000476743 MRPL38Q96DV4 380 aaKnown RBP15.28■□□□□ 0.04
MSL3-213ENST00000476743 NFKBIZQ9BYH8 718 aa15.28■□□□□ 0.04
MSL3-213ENST00000476743 PRDM6Q9NQX0 595 aa15.28■□□□□ 0.04
MSL3-213ENST00000476743 BMP2KQ9NSY1 1161 aaPredicted RBP15.28■□□□□ 0.04
MSL3-213ENST00000476743 AGPAT5Q9NUQ2 364 aa15.28■□□□□ 0.04
MSL3-213ENST00000476743 LRWD1Q9UFC0 647 aa15.28■□□□□ 0.04
MSL3-213ENST00000476743 VCANP13611 3396 aa15.28■□□□□ 0.04
MSL3-213ENST00000476743 A0A087WWV3 80 aa15.27■□□□□ 0.04
MSL3-213ENST00000476743 HOXA2O43364 376 aa15.27■□□□□ 0.04
MSL3-213ENST00000476743 ATF7P17544 494 aaPredicted RBP15.27■□□□□ 0.04
MSL3-213ENST00000476743 PTENP60484 403 aa15.27■□□□□ 0.04
MSL3-213ENST00000476743 PCBP1Q15365 356 aaKnown RBP eCLIP15.27■□□□□ 0.04
MSL3-213ENST00000476743 ECM1Q16610 540 aa15.27■□□□□ 0.04
MSL3-213ENST00000476743 NAALADL2Q58DX5 795 aa15.27■□□□□ 0.04
MSL3-213ENST00000476743 FAM102BQ5T8I3 360 aa15.27■□□□□ 0.04
MSL3-213ENST00000476743 RNF149Q8NC42 400 aa15.27■□□□□ 0.04
MSL3-213ENST00000476743 ASAP3Q8TDY4 903 aa15.27■□□□□ 0.04
MSL3-213ENST00000476743 SNX21Q969T3 373 aa15.27■□□□□ 0.04
MSL3-213ENST00000476743 C11orf84Q9BUA3 381 aaPredicted RBP15.27■□□□□ 0.04
MSL3-213ENST00000476743 RAB34Q9BZG1 259 aa15.27■□□□□ 0.04
MSL3-213ENST00000476743 TMEM117Q9H0C3 514 aa15.27■□□□□ 0.04
MSL3-213ENST00000476743 LMAN2LQ9H0V9 348 aa15.27■□□□□ 0.04
MSL3-213ENST00000476743 MINDY3Q9H8M7 445 aa15.27■□□□□ 0.04
MSL3-213ENST00000476743 TBKBP1A7MCY6 615 aa15.26■□□□□ 0.03
MSL3-213ENST00000476743 ZNF623O75123 536 aa15.26■□□□□ 0.03
MSL3-213ENST00000476743 SRGAP2CP0DJJ0 459 aa15.26■□□□□ 0.03
MSL3-213ENST00000476743 FGFR1P11362 822 aa15.26■□□□□ 0.03
MSL3-213ENST00000476743 PDCP20941 246 aa15.26■□□□□ 0.03
MSL3-213ENST00000476743 GLRA2P23416 452 aa15.26■□□□□ 0.03
MSL3-213ENST00000476743 CCT6AP40227 531 aaKnown RBP15.26■□□□□ 0.03
MSL3-213ENST00000476743 PHKA2P46019 1235 aa15.26■□□□□ 0.03
MSL3-213ENST00000476743 CAPSQ13938 189 aa15.26■□□□□ 0.03
MSL3-213ENST00000476743 TFDP1Q14186 410 aa15.26■□□□□ 0.03
MSL3-213ENST00000476743 PTPROQ16827 1216 aa15.26■□□□□ 0.03
MSL3-213ENST00000476743 PAN2Q504Q3 1202 aaKnown RBP15.26■□□□□ 0.03
MSL3-213ENST00000476743 ARL6IP4Q66PJ3 421 aaKnown RBP15.26■□□□□ 0.03
MSL3-213ENST00000476743 DTHD1Q6ZMT9 781 aa15.26■□□□□ 0.03
MSL3-213ENST00000476743 CATSPER4Q7RTX7 472 aa15.26■□□□□ 0.03
MSL3-213ENST00000476743 BRAPQ7Z569 592 aa15.26■□□□□ 0.03
MSL3-213ENST00000476743 MICALL1Q8N3F8 863 aa15.26■□□□□ 0.03
MSL3-213ENST00000476743 MCPH1Q8NEM0 835 aa15.26■□□□□ 0.03
MSL3-213ENST00000476743 ATXN2LQ8WWM7 1075 aaKnown RBP15.26■□□□□ 0.03
MSL3-213ENST00000476743 RSPH1Q8WYR4 309 aa15.26■□□□□ 0.03
MSL3-213ENST00000476743 CCDC43Q96MW1 224 aaKnown RBP15.26■□□□□ 0.03
MSL3-213ENST00000476743 CASD1Q96PB1 797 aa15.26■□□□□ 0.03
MSL3-213ENST00000476743 MMTAG2Q9BU76 263 aaKnown RBP15.26■□□□□ 0.03
MSL3-213ENST00000476743 THEGQ9P2T0 379 aa15.26■□□□□ 0.03
MSL3-213ENST00000476743 PLXNA4Q9HCM2 1894 aa15.25■□□□□ 0.03
MSL3-213ENST00000476743 K7ELQ4 463 aaPredicted RBP15.25■□□□□ 0.03
MSL3-213ENST00000476743 USO1O60763 962 aaKnown RBP15.25■□□□□ 0.03
MSL3-213ENST00000476743 SKIP12755 728 aa15.25■□□□□ 0.03
MSL3-213ENST00000476743 CYP11B2P19099 503 aa15.25■□□□□ 0.03
MSL3-213ENST00000476743 HOXA11P31270 313 aaPredicted RBP15.25■□□□□ 0.03
MSL3-213ENST00000476743 RAB27AP51159 221 aa15.25■□□□□ 0.03
MSL3-213ENST00000476743 SNX29Q8TEQ0 813 aa15.25■□□□□ 0.03
MSL3-213ENST00000476743 POLR3FQ9H1D9 316 aaPredicted RBP15.25■□□□□ 0.03
MSL3-213ENST00000476743 CWH43Q9H720 699 aa15.25■□□□□ 0.03
MSL3-213ENST00000476743 PLAGL2Q9UPG8 496 aa15.25■□□□□ 0.03
MSL3-213ENST00000476743 PIN4Q9Y237 131 aaKnown RBP15.25■□□□□ 0.03
MSL3-213ENST00000476743 BRWD1Q9NSI6 2320 aa15.25■□□□□ 0.03
MSL3-213ENST00000476743 ARHGEF35A5YM69 484 aa15.24■□□□□ 0.03
MSL3-213ENST00000476743 PP2D1A8MPX8 630 aa15.24■□□□□ 0.03
MSL3-213ENST00000476743 GRM6O15303 877 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms