RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 LINC01599Q8WXQ3 324 aa16.04■□□□□ 0.16
ABCF3-211ENST00000475728 POLR3FQ9H1D9 316 aaPredicted RBP16.04■□□□□ 0.16
ABCF3-211ENST00000475728 BHMT2Q9H2M3 363 aa16.04■□□□□ 0.16
ABCF3-211ENST00000475728 PCDHB7Q9Y5E2 793 aa16.04■□□□□ 0.16
ABCF3-211ENST00000475728 CLIC4Q9Y696 253 aa16.04■□□□□ 0.16
ABCF3-211ENST00000475728 MICAL3Q7RTP6 2002 aa16.04■□□□□ 0.16
ABCF3-211ENST00000475728 SIP14410 1827 aa16.03■□□□□ 0.16
ABCF3-211ENST00000475728 A0A087WWV3 80 aa16.03■□□□□ 0.16
ABCF3-211ENST00000475728 CDC25AP30304 524 aa16.03■□□□□ 0.16
ABCF3-211ENST00000475728 TAP1Q03518 808 aa16.03■□□□□ 0.16
ABCF3-211ENST00000475728 NCBP1Q09161 790 aaKnown RBP16.03■□□□□ 0.16
ABCF3-211ENST00000475728 DSC3Q14574 896 aa16.03■□□□□ 0.16
ABCF3-211ENST00000475728 PPP2R5AQ15172 486 aa16.03■□□□□ 0.16
ABCF3-211ENST00000475728 PTPAQ15257 358 aa16.03■□□□□ 0.16
ABCF3-211ENST00000475728 ZRSR1Q15695 479 aaKnown RBP16.03■□□□□ 0.16
ABCF3-211ENST00000475728 FAM102BQ5T8I3 360 aa16.03■□□□□ 0.16
ABCF3-211ENST00000475728 ATL3Q6DD88 541 aa16.03■□□□□ 0.16
ABCF3-211ENST00000475728 KSR1Q8IVT5 923 aa16.03■□□□□ 0.16
ABCF3-211ENST00000475728 SPRYD3Q8NCJ5 442 aa16.03■□□□□ 0.16
ABCF3-211ENST00000475728 RASSF8Q8NHQ8 419 aa16.03■□□□□ 0.16
ABCF3-211ENST00000475728 SP7Q8TDD2 431 aaPredicted RBP16.03■□□□□ 0.16
ABCF3-211ENST00000475728 KIFAP3Q92845 792 aa16.03■□□□□ 0.16
ABCF3-211ENST00000475728 SAMD11Q96NU1 681 aa16.03■□□□□ 0.16
ABCF3-211ENST00000475728 MMTAG2Q9BU76 263 aaKnown RBP16.03■□□□□ 0.16
ABCF3-211ENST00000475728 NFKBIZQ9BYH8 718 aa16.03■□□□□ 0.16
ABCF3-211ENST00000475728 ELAC1Q9H777 363 aaKnown RBP16.03■□□□□ 0.16
ABCF3-211ENST00000475728 IFT122Q9HBG6 1241 aa16.03■□□□□ 0.16
ABCF3-211ENST00000475728 C9IYK1 514 aa16.02■□□□□ 0.16
ABCF3-211ENST00000475728 HOXA2O43364 376 aa16.02■□□□□ 0.16
ABCF3-211ENST00000475728 MGEA5O60502 916 aa16.02■□□□□ 0.16
ABCF3-211ENST00000475728 SKIP12755 728 aa16.02■□□□□ 0.16
ABCF3-211ENST00000475728 TXLNAP40222 546 aa16.02■□□□□ 0.16
ABCF3-211ENST00000475728 PTENP60484 403 aa16.02■□□□□ 0.16
ABCF3-211ENST00000475728 FAM189BP81408 668 aa16.02■□□□□ 0.16
ABCF3-211ENST00000475728 GRIN2CQ14957 1233 aa16.02■□□□□ 0.16
ABCF3-211ENST00000475728 SLC39A14Q15043 492 aa16.02■□□□□ 0.16
ABCF3-211ENST00000475728 ECM1Q16610 540 aa16.02■□□□□ 0.16
ABCF3-211ENST00000475728 FAM173BQ6P4H8 233 aa16.02■□□□□ 0.16
ABCF3-211ENST00000475728 IFNLR1Q8IU57 520 aaPredicted RBP16.02■□□□□ 0.16
ABCF3-211ENST00000475728 IFT74Q96LB3 600 aa16.02■□□□□ 0.16
ABCF3-211ENST00000475728 TGS1Q96RS0 853 aaKnown RBP16.02■□□□□ 0.16
ABCF3-211ENST00000475728 GAS2L1Q99501 681 aaPredicted RBP16.02■□□□□ 0.16
ABCF3-211ENST00000475728 CDX2Q99626 313 aaPredicted RBP16.02■□□□□ 0.16
ABCF3-211ENST00000475728 TIPINQ9BVW5 301 aa16.02■□□□□ 0.16
ABCF3-211ENST00000475728 TMEM161AQ9NX61 479 aa16.02■□□□□ 0.16
ABCF3-211ENST00000475728 SRPRBQ9Y5M8 271 aaKnown RBP16.02■□□□□ 0.16
ABCF3-211ENST00000475728 PRUNE2Q8WUY3 3088 aa16.01■□□□□ 0.15
ABCF3-211ENST00000475728 LCHNA4D1U4 455 aa16.01■□□□□ 0.15
ABCF3-211ENST00000475728 DGKIO75912 1065 aa16.01■□□□□ 0.15
ABCF3-211ENST00000475728 ERLIN2O94905 339 aa16.01■□□□□ 0.15
ABCF3-211ENST00000475728 F13A1P00488 732 aa16.01■□□□□ 0.15
ABCF3-211ENST00000475728 GLRA2P23416 452 aa16.01■□□□□ 0.15
ABCF3-211ENST00000475728 NASPP49321 788 aaPredicted RBP16.01■□□□□ 0.15
ABCF3-211ENST00000475728 RAB27AP51159 221 aa16.01■□□□□ 0.15
ABCF3-211ENST00000475728 CEBPZQ03701 1054 aaKnown RBP16.01■□□□□ 0.15
ABCF3-211ENST00000475728 CAPSQ13938 189 aa16.01■□□□□ 0.15
ABCF3-211ENST00000475728 STK38Q15208 465 aa16.01■□□□□ 0.15
ABCF3-211ENST00000475728 TMEM119Q4V9L6 283 aa16.01■□□□□ 0.15
ABCF3-211ENST00000475728 MAEAQ7L5Y9 396 aa16.01■□□□□ 0.15
ABCF3-211ENST00000475728 ZBTB8OSQ8IWT0 167 aa16.01■□□□□ 0.15
ABCF3-211ENST00000475728 FIBCD1Q8N539 461 aa16.01■□□□□ 0.15
ABCF3-211ENST00000475728 KRI1Q8N9T8 703 aaKnown RBP16.01■□□□□ 0.15
ABCF3-211ENST00000475728 ASAP3Q8TDY4 903 aa16.01■□□□□ 0.15
ABCF3-211ENST00000475728 RSPH1Q8WYR4 309 aa16.01■□□□□ 0.15
ABCF3-211ENST00000475728 USP28Q96RU2 1077 aa16.01■□□□□ 0.15
ABCF3-211ENST00000475728 TRAIPQ9BWF2 469 aa16.01■□□□□ 0.15
ABCF3-211ENST00000475728 C2orf40Q9H1Z8 148 aa16.01■□□□□ 0.15
ABCF3-211ENST00000475728 KCND2Q9NZV8 630 aa16.01■□□□□ 0.15
ABCF3-211ENST00000475728 DAXXQ9UER7 740 aaPredicted RBP16.01■□□□□ 0.15
ABCF3-211ENST00000475728 KCNG1Q9UIX4 513 aa16.01■□□□□ 0.15
ABCF3-211ENST00000475728 PIN4Q9Y237 131 aaKnown RBP16.01■□□□□ 0.15
ABCF3-211ENST00000475728 RWDD3Q9Y3V2 267 aa16.01■□□□□ 0.15
ABCF3-211ENST00000475728 ADGRA3Q8IWK6 1321 aa16■□□□□ 0.15
ABCF3-211ENST00000475728 COL4A6Q14031 1691 aa16■□□□□ 0.15
ABCF3-211ENST00000475728 A0A0U1RQF3 1178 aa16■□□□□ 0.15
ABCF3-211ENST00000475728 LINC01553A4QN01 128 aa16■□□□□ 0.15
ABCF3-211ENST00000475728 LRRIQ4A6NIV6 560 aa16■□□□□ 0.15
ABCF3-211ENST00000475728 E9PMD0 336 aa16■□□□□ 0.15
ABCF3-211ENST00000475728 INO80B-WBP1J3KQ70 363 aa16■□□□□ 0.15
ABCF3-211ENST00000475728 CSDE1O75534 798 aaKnown RBP16■□□□□ 0.15
ABCF3-211ENST00000475728 YEATS4O95619 227 aa16■□□□□ 0.15
ABCF3-211ENST00000475728 EOMESO95936 686 aa16■□□□□ 0.15
ABCF3-211ENST00000475728 FGFR4P22455 802 aa16■□□□□ 0.15
ABCF3-211ENST00000475728 MARCKSP29966 332 aaPredicted RBP16■□□□□ 0.15
ABCF3-211ENST00000475728 AXLP30530 894 aa16■□□□□ 0.15
ABCF3-211ENST00000475728 ERVK-21P61565 698 aa16■□□□□ 0.15
ABCF3-211ENST00000475728 GRB10Q13322 594 aa16■□□□□ 0.15
ABCF3-211ENST00000475728 BTG3Q14201 252 aaPredicted RBP16■□□□□ 0.15
ABCF3-211ENST00000475728 TWF2Q6IBS0 349 aaKnown RBP16■□□□□ 0.15
ABCF3-211ENST00000475728 CMTR2Q8IYT2 770 aaKnown RBP16■□□□□ 0.15
ABCF3-211ENST00000475728 CRIPAKQ8N1N5 446 aa16■□□□□ 0.15
ABCF3-211ENST00000475728 CCDC51Q96ER9 411 aa16■□□□□ 0.15
ABCF3-211ENST00000475728 DRC1Q96MC2 740 aa16■□□□□ 0.15
ABCF3-211ENST00000475728 PNMA5Q96PV4 448 aa16■□□□□ 0.15
ABCF3-211ENST00000475728 CCSER1Q9C0I3 900 aa16■□□□□ 0.15
ABCF3-211ENST00000475728 AGPAT5Q9NUQ2 364 aa16■□□□□ 0.15
ABCF3-211ENST00000475728 CCDC39Q9UFE4 941 aa16■□□□□ 0.15
ABCF3-211ENST00000475728 FBXO2Q9UK22 296 aaPredicted RBP16■□□□□ 0.15
ABCF3-211ENST00000475728 ARID2Q68CP9 1835 aa16■□□□□ 0.15
ABCF3-211ENST00000475728 SSBP05455 408 aaKnown RBP eCLIP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms