RNA–Protein interactions for RNA: ENST00000475605.1

CDPF1-206, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 2

Gene CDPF1, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-206ENST00000475605 TBC1D8BQ0IIM8 1120 aa17.73■□□□□ 0.43
CDPF1-206ENST00000475605 TARBP2Q15633 366 aaKnown RBP17.73■□□□□ 0.43
CDPF1-206ENST00000475605 NTRK3Q16288 839 aa17.73■□□□□ 0.43
CDPF1-206ENST00000475605 TPRNQ4KMQ1 711 aa17.73■□□□□ 0.43
CDPF1-206ENST00000475605 TMEM173Q86WV6 379 aaPredicted RBP17.73■□□□□ 0.43
CDPF1-206ENST00000475605 FEZF2Q8TBJ5 459 aa17.73■□□□□ 0.43
CDPF1-206ENST00000475605 SLC5A5Q92911 643 aa17.73■□□□□ 0.43
CDPF1-206ENST00000475605 SH2D3AQ9BRG2 576 aa17.73■□□□□ 0.43
CDPF1-206ENST00000475605 ADAM7Q9H2U9 754 aa17.73■□□□□ 0.43
CDPF1-206ENST00000475605 NR2E1Q9Y466 385 aa17.73■□□□□ 0.43
CDPF1-206ENST00000475605 NID2Q14112 1375 aa17.72■□□□□ 0.43
CDPF1-206ENST00000475605 H0Y858 1186 aa17.72■□□□□ 0.43
CDPF1-206ENST00000475605 GAS7O60861 476 aa17.72■□□□□ 0.43
CDPF1-206ENST00000475605 BRD1O95696 1058 aa17.72■□□□□ 0.43
CDPF1-206ENST00000475605 CXCL14O95715 111 aa17.72■□□□□ 0.43
CDPF1-206ENST00000475605 ALDH7A1P49419 539 aaKnown RBP17.72■□□□□ 0.43
CDPF1-206ENST00000475605 CES5AQ6NT32 575 aa17.72■□□□□ 0.43
CDPF1-206ENST00000475605 BLOC1S2Q6QNY1 142 aa17.72■□□□□ 0.43
CDPF1-206ENST00000475605 ATOH1Q92858 354 aaPredicted RBP17.72■□□□□ 0.43
CDPF1-206ENST00000475605 LPPQ93052 612 aa17.72■□□□□ 0.43
CDPF1-206ENST00000475605 JAKMIP1Q96N16 626 aaKnown RBP17.72■□□□□ 0.43
CDPF1-206ENST00000475605 RIT2Q99578 217 aa17.72■□□□□ 0.43
CDPF1-206ENST00000475605 A0A087WZ62 844 aa17.71■□□□□ 0.43
CDPF1-206ENST00000475605 MEIS3P2A8K0S8 358 aa17.71■□□□□ 0.43
CDPF1-206ENST00000475605 STBD1O95210 358 aa17.71■□□□□ 0.43
CDPF1-206ENST00000475605 ASGR2P07307 311 aa17.71■□□□□ 0.43
CDPF1-206ENST00000475605 JAK3P52333 1124 aa17.71■□□□□ 0.43
CDPF1-206ENST00000475605 AKAP17AQ02040 695 aaKnown RBP17.71■□□□□ 0.43
CDPF1-206ENST00000475605 ITIH3Q06033 890 aa17.71■□□□□ 0.43
CDPF1-206ENST00000475605 MTERF2Q49AM1 385 aa17.71■□□□□ 0.43
CDPF1-206ENST00000475605 RARS2Q5T160 578 aaKnown RBP17.71■□□□□ 0.43
CDPF1-206ENST00000475605 LRCH2Q5VUJ6 765 aa17.71■□□□□ 0.43
CDPF1-206ENST00000475605 VPS52Q8N1B4 723 aa17.71■□□□□ 0.43
CDPF1-206ENST00000475605 ZNF710Q8N1W2 664 aa17.71■□□□□ 0.43
CDPF1-206ENST00000475605 BICD2Q8TD16 824 aa17.71■□□□□ 0.43
CDPF1-206ENST00000475605 BCL7CQ8WUZ0 217 aaPredicted RBP17.71■□□□□ 0.43
CDPF1-206ENST00000475605 KCNB2Q92953 911 aa17.71■□□□□ 0.43
CDPF1-206ENST00000475605 CEP89Q96ST8 783 aa17.71■□□□□ 0.43
CDPF1-206ENST00000475605 FDXACB1Q9BRP7 624 aaPredicted RBP17.71■□□□□ 0.43
CDPF1-206ENST00000475605 TEKT3Q9BXF9 490 aa17.71■□□□□ 0.43
CDPF1-206ENST00000475605 SLC26A6Q9BXS9 759 aa17.71■□□□□ 0.43
CDPF1-206ENST00000475605 ZBP1Q9H171 429 aa17.71■□□□□ 0.43
CDPF1-206ENST00000475605 DACT1Q9NYF0 836 aa17.71■□□□□ 0.43
CDPF1-206ENST00000475605 SEPT9Q9UHD8 586 aaPredicted RBP17.71■□□□□ 0.43
CDPF1-206ENST00000475605 SORCS3Q9UPU3 1222 aa17.71■□□□□ 0.43
CDPF1-206ENST00000475605 SNX14Q9Y5W7 946 aa17.71■□□□□ 0.43
CDPF1-206ENST00000475605 USP34Q70CQ2 3546 aa17.7■□□□□ 0.42
CDPF1-206ENST00000475605 ST18O60284 1047 aa17.7■□□□□ 0.42
CDPF1-206ENST00000475605 GFRA3O60609 400 aa17.7■□□□□ 0.42
CDPF1-206ENST00000475605 ZC3H11AO75152 810 aaKnown RBP eCLIP17.7■□□□□ 0.42
CDPF1-206ENST00000475605 PSMD10O75832 226 aa17.7■□□□□ 0.42
CDPF1-206ENST00000475605 EPCAMP16422 314 aa17.7■□□□□ 0.42
CDPF1-206ENST00000475605 SFNP31947 248 aa17.7■□□□□ 0.42
CDPF1-206ENST00000475605 PHKA2P46019 1235 aa17.7■□□□□ 0.42
CDPF1-206ENST00000475605 USP11P51784 963 aa17.7■□□□□ 0.42
CDPF1-206ENST00000475605 CCT2P78371 535 aaKnown RBP17.7■□□□□ 0.42
CDPF1-206ENST00000475605 MIER3Q7Z3K6 550 aa17.7■□□□□ 0.42
CDPF1-206ENST00000475605 CCDC148Q8NFR7 591 aa17.7■□□□□ 0.42
CDPF1-206ENST00000475605 TBCKQ8TEA7 893 aa17.7■□□□□ 0.42
CDPF1-206ENST00000475605 TMEM169Q96HH4 297 aa17.7■□□□□ 0.42
CDPF1-206ENST00000475605 NECTIN4Q96NY8 510 aa17.7■□□□□ 0.42
CDPF1-206ENST00000475605 RNF26Q9BY78 433 aaPredicted RBP17.7■□□□□ 0.42
CDPF1-206ENST00000475605 MRPL9Q9BYD2 267 aaKnown RBP17.7■□□□□ 0.42
CDPF1-206ENST00000475605 GCOM2Q9BZD3 368 aaPredicted RBP17.7■□□□□ 0.42
CDPF1-206ENST00000475605 NCOA5Q9HCD5 579 aaKnown RBP17.7■□□□□ 0.42
CDPF1-206ENST00000475605 IGKV6-21A0A0C4DH24 114 aa17.69■□□□□ 0.42
CDPF1-206ENST00000475605 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.69■□□□□ 0.42
CDPF1-206ENST00000475605 TDP2O95551 362 aa17.69■□□□□ 0.42
CDPF1-206ENST00000475605 MTMR3Q13615 1198 aa17.69■□□□□ 0.42
CDPF1-206ENST00000475605 TWF2Q6IBS0 349 aaKnown RBP17.69■□□□□ 0.42
CDPF1-206ENST00000475605 KSR1Q8IVT5 923 aa17.69■□□□□ 0.42
CDPF1-206ENST00000475605 NIFKQ9BYG3 293 aaKnown RBP17.69■□□□□ 0.42
CDPF1-206ENST00000475605 AGXT2Q9BYV1 514 aa17.69■□□□□ 0.42
CDPF1-206ENST00000475605 NRDE2Q9H7Z3 1164 aa17.69■□□□□ 0.42
CDPF1-206ENST00000475605 CHST12Q9NRB3 414 aa17.69■□□□□ 0.42
CDPF1-206ENST00000475605 TBC1D13Q9NVG8 400 aa17.69■□□□□ 0.42
CDPF1-206ENST00000475605 LIMD1Q9UGP4 676 aa17.69■□□□□ 0.42
CDPF1-206ENST00000475605 B4GALT3O60512 393 aa17.68■□□□□ 0.42
CDPF1-206ENST00000475605 GALTP07902 379 aa17.68■□□□□ 0.42
CDPF1-206ENST00000475605 IFNAR1P17181 557 aa17.68■□□□□ 0.42
CDPF1-206ENST00000475605 RPS6KB1P23443 525 aa17.68■□□□□ 0.42
CDPF1-206ENST00000475605 MTHFRP42898 656 aa17.68■□□□□ 0.42
CDPF1-206ENST00000475605 NLRP5P59047 1200 aa17.68■□□□□ 0.42
CDPF1-206ENST00000475605 XKR3Q5GH77 459 aa17.68■□□□□ 0.42
CDPF1-206ENST00000475605 B3GNT9Q6UX72 402 aa17.68■□□□□ 0.42
CDPF1-206ENST00000475605 RHPN2Q8IUC4 686 aa17.68■□□□□ 0.42
CDPF1-206ENST00000475605 UBALD2Q8IYN6 164 aa17.68■□□□□ 0.42
CDPF1-206ENST00000475605 TMEM105Q8N8V8 129 aa17.68■□□□□ 0.42
CDPF1-206ENST00000475605 SLC22A17Q8WUG5 538 aa17.68■□□□□ 0.42
CDPF1-206ENST00000475605 IGSF21Q96ID5 467 aa17.68■□□□□ 0.42
CDPF1-206ENST00000475605 VN1R3Q9BXE9 311 aa17.68■□□□□ 0.42
CDPF1-206ENST00000475605 DNAJB4Q9UDY4 337 aa17.68■□□□□ 0.42
CDPF1-206ENST00000475605 PIN4Q9Y237 131 aaKnown RBP17.68■□□□□ 0.42
CDPF1-206ENST00000475605 INPP5FQ9Y2H2 1132 aa17.68■□□□□ 0.42
CDPF1-206ENST00000475605 CACNA1HO95180 2353 aa17.68■□□□□ 0.42
CDPF1-206ENST00000475605 PLXNA3P51805 1871 aa17.67■□□□□ 0.42
CDPF1-206ENST00000475605 GALR2O43603 387 aaPredicted RBP17.67■□□□□ 0.42
CDPF1-206ENST00000475605 CTSAP10619 480 aa17.67■□□□□ 0.42
CDPF1-206ENST00000475605 PDIA3P30101 505 aaKnown RBP17.67■□□□□ 0.42
CDPF1-206ENST00000475605 Q4G0T1 1027 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms