RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 PDXDC1Q6P996 788 aa23.04■■□□□ 1.28
SH3D21-202ENST00000474766 CCDC121Q6ZUS5 278 aa23.04■■□□□ 1.28
SH3D21-202ENST00000474766 RRAGAQ7L523 313 aa23.04■■□□□ 1.28
SH3D21-202ENST00000474766 SCFD1Q8WVM8 642 aa23.04■■□□□ 1.28
SH3D21-202ENST00000474766 CD248Q9HCU0 757 aa23.04■■□□□ 1.28
SH3D21-202ENST00000474766 MANSC4A6NHS7 340 aaPredicted RBP23.04■■□□□ 1.28
SH3D21-202ENST00000474766 GOLGA6L10A6NI86 522 aa23.04■■□□□ 1.28
SH3D21-202ENST00000474766 FAM153BP0C7A2 387 aa23.04■■□□□ 1.28
SH3D21-202ENST00000474766 CXCR5P32302 372 aa23.04■■□□□ 1.28
SH3D21-202ENST00000474766 MAP2K1Q02750 393 aaPredicted RBP23.04■■□□□ 1.28
SH3D21-202ENST00000474766 IFT88Q13099 833 aa23.04■■□□□ 1.28
SH3D21-202ENST00000474766 FAM153CQ494X1 144 aa23.04■■□□□ 1.28
SH3D21-202ENST00000474766 HERC4Q5GLZ8 1057 aaPredicted RBP23.04■■□□□ 1.28
SH3D21-202ENST00000474766 CATSPER3Q86XQ3 398 aa23.04■■□□□ 1.28
SH3D21-202ENST00000474766 CYFIP2Q96F07 1278 aa23.04■■□□□ 1.28
SH3D21-202ENST00000474766 UIMC1Q96RL1 719 aa23.04■■□□□ 1.28
SH3D21-202ENST00000474766 FAM153AQ9UHL3 310 aa23.04■■□□□ 1.28
SH3D21-202ENST00000474766 SYNPO2Q9UMS6 1093 aa23.04■■□□□ 1.28
SH3D21-202ENST00000474766 KCNH4Q9UQ05 1017 aa23.04■■□□□ 1.28
SH3D21-202ENST00000474766 AFG3L2Q9Y4W6 797 aa23.04■■□□□ 1.28
SH3D21-202ENST00000474766 NPHP3-ACAD11A0A0J9YXS1 232 aa23.03■■□□□ 1.28
SH3D21-202ENST00000474766 CIITAP33076 1130 aa23.03■■□□□ 1.28
SH3D21-202ENST00000474766 TM4SF4P48230 202 aa23.03■■□□□ 1.28
SH3D21-202ENST00000474766 GUCY2DQ02846 1103 aa23.03■■□□□ 1.28
SH3D21-202ENST00000474766 SNCBQ16143 134 aa23.03■■□□□ 1.28
SH3D21-202ENST00000474766 PRR16Q569H4 304 aa23.03■■□□□ 1.28
SH3D21-202ENST00000474766 TRIM59Q8IWR1 403 aa23.03■■□□□ 1.28
SH3D21-202ENST00000474766 GINM1Q9NU53 330 aa23.03■■□□□ 1.28
SH3D21-202ENST00000474766 TBC1D7Q9P0N9 293 aa23.03■■□□□ 1.28
SH3D21-202ENST00000474766 RPA1P27694 616 aa23.03■■□□□ 1.28
SH3D21-202ENST00000474766 MRPS25P82663 173 aaKnown RBP23.03■■□□□ 1.28
SH3D21-202ENST00000474766 BANK1Q8NDB2 785 aa23.03■■□□□ 1.28
SH3D21-202ENST00000474766 BRI3BPQ8WY22 251 aa23.03■■□□□ 1.28
SH3D21-202ENST00000474766 SYN2Q92777 582 aaPredicted RBP23.03■■□□□ 1.28
SH3D21-202ENST00000474766 FAM20AQ96MK3 541 aa23.03■■□□□ 1.28
SH3D21-202ENST00000474766 PTPN18Q99952 460 aa23.03■■□□□ 1.28
SH3D21-202ENST00000474766 LUC7LQ9NQ29 371 aaKnown RBP23.03■■□□□ 1.28
SH3D21-202ENST00000474766 EMILIN3Q9NT22 766 aa23.03■■□□□ 1.28
SH3D21-202ENST00000474766 SMARCAL1Q9NZC9 954 aa23.03■■□□□ 1.28
SH3D21-202ENST00000474766 POTEFA5A3E0 1075 aa23.02■■□□□ 1.28
SH3D21-202ENST00000474766 E7EVH7 732 aa23.02■■□□□ 1.28
SH3D21-202ENST00000474766 SPATA31C1P0DKV0 1188 aa23.02■■□□□ 1.28
SH3D21-202ENST00000474766 MYBP10242 640 aa23.02■■□□□ 1.28
SH3D21-202ENST00000474766 BMP3P12645 472 aa23.02■■□□□ 1.28
SH3D21-202ENST00000474766 GTF2A2P52657 109 aa23.02■■□□□ 1.28
SH3D21-202ENST00000474766 SNAP25P60880 206 aa23.02■■□□□ 1.28
SH3D21-202ENST00000474766 IFFO1Q0D2I5 559 aa23.02■■□□□ 1.28
SH3D21-202ENST00000474766 BIRC3Q13489 604 aa23.02■■□□□ 1.28
SH3D21-202ENST00000474766 POTEGQ6S5H5 508 aa23.02■■□□□ 1.28
SH3D21-202ENST00000474766 POTEEQ6S8J3 1075 aa23.02■■□□□ 1.28
SH3D21-202ENST00000474766 PPP4R3CPQ6ZMV5 832 aa23.02■■□□□ 1.28
SH3D21-202ENST00000474766 TANGO6Q9C0B7 1094 aa23.02■■□□□ 1.28
SH3D21-202ENST00000474766 EHD2Q9NZN4 543 aa23.02■■□□□ 1.28
SH3D21-202ENST00000474766 CEP72Q9P209 647 aa23.02■■□□□ 1.28
SH3D21-202ENST00000474766 STK24Q9Y6E0 443 aa23.02■■□□□ 1.28
SH3D21-202ENST00000474766 TESPA1A2RU30 521 aaPredicted RBP23.01■■□□□ 1.27
SH3D21-202ENST00000474766 GMNCA6NCL1 334 aa23.01■■□□□ 1.27
SH3D21-202ENST00000474766 FAM86B1E9PN63 330 aa23.01■■□□□ 1.27
SH3D21-202ENST00000474766 IGF2BP3O00425 579 aaKnown RBP eCLIP23.01■■□□□ 1.27
SH3D21-202ENST00000474766 CES2O00748 559 aa23.01■■□□□ 1.27
SH3D21-202ENST00000474766 OPLAHO14841 1288 aa23.01■■□□□ 1.27
SH3D21-202ENST00000474766 NCK2O43639 380 aa23.01■■□□□ 1.27
SH3D21-202ENST00000474766 NOL4O94818 638 aa23.01■■□□□ 1.27
SH3D21-202ENST00000474766 FAM86B2P0C5J1 330 aa23.01■■□□□ 1.27
SH3D21-202ENST00000474766 HSPA1AP0DMV8 641 aaKnown RBP23.01■■□□□ 1.27
SH3D21-202ENST00000474766 HSPA1BP0DMV9 641 aaKnown RBP23.01■■□□□ 1.27
SH3D21-202ENST00000474766 SEC24CP53992 1094 aa23.01■■□□□ 1.27
SH3D21-202ENST00000474766 SREBF2Q12772 1141 aa23.01■■□□□ 1.27
SH3D21-202ENST00000474766 SNAPC2Q13487 334 aa23.01■■□□□ 1.27
SH3D21-202ENST00000474766 EDRF1Q3B7T1 1238 aa23.01■■□□□ 1.27
SH3D21-202ENST00000474766 HGSNATQ68CP4 663 aa23.01■■□□□ 1.27
SH3D21-202ENST00000474766 ERMNQ8TAM6 284 aa23.01■■□□□ 1.27
SH3D21-202ENST00000474766 CASKIN2Q8WXE0 1202 aa23.01■■□□□ 1.27
SH3D21-202ENST00000474766 IFT81Q8WYA0 676 aa23.01■■□□□ 1.27
SH3D21-202ENST00000474766 CCDC114Q96M63 670 aa23.01■■□□□ 1.27
SH3D21-202ENST00000474766 NUCKS1Q9H1E3 243 aaKnown RBP23.01■■□□□ 1.27
SH3D21-202ENST00000474766 CCL15-CCL14A0A0B4J2E2 113 aa23.01■■□□□ 1.27
SH3D21-202ENST00000474766 C5orf60A6NFR6 353 aa23.01■■□□□ 1.27
SH3D21-202ENST00000474766 SPDYE3A6NKU9 549 aa23.01■■□□□ 1.27
SH3D21-202ENST00000474766 ERCC3P19447 782 aa23.01■■□□□ 1.27
SH3D21-202ENST00000474766 CACNB1Q02641 598 aaPredicted RBP23.01■■□□□ 1.27
SH3D21-202ENST00000474766 CCL15Q16663 113 aa23.01■■□□□ 1.27
SH3D21-202ENST00000474766 LACTB2Q53H82 288 aaPredicted RBP23.01■■□□□ 1.27
SH3D21-202ENST00000474766 PARP9Q8IXQ6 854 aa23.01■■□□□ 1.27
SH3D21-202ENST00000474766 PSMB7Q99436 277 aa23.01■■□□□ 1.27
SH3D21-202ENST00000474766 SALL4Q9UJQ4 1053 aa23.01■■□□□ 1.27
SH3D21-202ENST00000474766 ODF2LQ9ULJ1 636 aa23.01■■□□□ 1.27
SH3D21-202ENST00000474766 CYP3A4P08684 503 aa23■■□□□ 1.27
SH3D21-202ENST00000474766 PAEPP09466 180 aa23■■□□□ 1.27
SH3D21-202ENST00000474766 TNNC1P63316 161 aa23■■□□□ 1.27
SH3D21-202ENST00000474766 MOGSQ13724 837 aa23■■□□□ 1.27
SH3D21-202ENST00000474766 GIT2Q14161 759 aa23■■□□□ 1.27
SH3D21-202ENST00000474766 USH1GQ495M9 461 aa23■■□□□ 1.27
SH3D21-202ENST00000474766 CACNA2D4Q7Z3S7 1137 aa23■■□□□ 1.27
SH3D21-202ENST00000474766 NELFCDQ8IXH7 590 aa23■■□□□ 1.27
SH3D21-202ENST00000474766 REM2Q8IYK8 340 aaPredicted RBP23■■□□□ 1.27
SH3D21-202ENST00000474766 SYT2Q8N9I0 419 aaPredicted RBP23■■□□□ 1.27
SH3D21-202ENST00000474766 SGSM3Q96HU1 749 aa23■■□□□ 1.27
SH3D21-202ENST00000474766 PLAAQ9Y263 795 aa23■■□□□ 1.27
SH3D21-202ENST00000474766 A0A1W2PRG0 241 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms