RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 TCTN1Q2MV58 587 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 LEXMQ3ZCV2 418 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 ARSHQ5FYA8 562 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 XKR9Q5GH70 373 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 ZNF618Q5T7W0 954 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 HAUS3Q68CZ6 603 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 RPAINQ86UA6 219 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 DAW1Q8N136 415 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 LRRC71Q8N4P6 559 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 ERMNQ8TAM6 284 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 DNAJB3Q8WWF6 145 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 CEP170P1Q96L14 293 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 SPATA32Q96LK8 384 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 NACC1Q96RE7 527 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 MTRQ99707 1265 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 RUSC1Q9BVN2 902 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 PANK2Q9BZ23 570 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 RAB34Q9BZG1 259 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 SCAND2PQ9GZW5 306 aaPredicted RBP7.79□□□□□ -1.16
LIMD1-204ENST00000474665 MTIF3Q9H2K0 278 aaKnown RBP7.79□□□□□ -1.16
LIMD1-204ENST00000474665 BHMT2Q9H2M3 363 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 GOLPH3LQ9H4A5 285 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 UBE2ZQ9H832 354 aaPredicted RBP7.79□□□□□ -1.16
LIMD1-204ENST00000474665 CDHR5Q9HBB8 845 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 POLD4Q9HCU8 107 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 BMP2KQ9NSY1 1161 aaPredicted RBP7.79□□□□□ -1.16
LIMD1-204ENST00000474665 DBR1Q9UK59 544 aaKnown RBP7.79□□□□□ -1.16
LIMD1-204ENST00000474665 HPSEQ9Y251 543 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 ATP6V1DQ9Y5K8 247 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 PKD1L2Q7Z442 2459 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 ZFHX4Q86UP3 3567 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 MYO7AQ13402 2215 aa7.79□□□□□ -1.16
LIMD1-204ENST00000474665 TTC3P53804 2025 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 SMIM35A0A1B0GVV1 85 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 GRXCR2A6NFK2 248 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 SLC26A4O43511 780 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 LPXNO60711 386 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 GADD45BO75293 160 aaPredicted RBP7.78□□□□□ -1.16
LIMD1-204ENST00000474665 GPR32O75388 356 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 EYA4O95677 639 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 CMA1P23946 247 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 ARL2P36404 184 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 MGAT3Q09327 533 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 TBC1D8BQ0IIM8 1120 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 TMEM62Q0P6H9 643 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 MAPK7Q13164 816 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 EMC2Q15006 297 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 FAM26DQ5JW98 314 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 ADALQ6DHV7 355 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 RINT1Q6NUQ1 792 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 EFCAB12Q6NXP0 572 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 TAF2Q6P1X5 1199 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 PADI6Q6TGC4 694 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 C1orf186Q6ZWK4 172 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 SPRED2Q7Z698 418 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 KSR1Q8IVT5 923 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 TMEM87AQ8NBN3 555 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 ASAP3Q8TDY4 903 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 BSNDQ8WZ55 320 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 TMEM143Q96AN5 459 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 FAM49AQ9H0Q0 323 aaPredicted RBP7.78□□□□□ -1.16
LIMD1-204ENST00000474665 ADAMTS10Q9H324 1103 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 HIPK3Q9H422 1215 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 SUGCTQ9HAC7 445 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 ALG13Q9NP73 1137 aaKnown RBP7.78□□□□□ -1.16
LIMD1-204ENST00000474665 GPRC5CQ9NQ84 441 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 RALYQ9UKM9 306 aaKnown RBP7.78□□□□□ -1.16
LIMD1-204ENST00000474665 SLC4A7Q9Y6M7 1214 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 COL4A6Q14031 1691 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 EPG5Q9HCE0 2579 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 MICAL3Q7RTP6 2002 aa7.78□□□□□ -1.16
LIMD1-204ENST00000474665 DCHS1Q96JQ0 3298 aa7.77□□□□□ -1.16
LIMD1-204ENST00000474665 NPHP3-ACAD11A0A0J9YXS1 232 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 A0A1B0GVL5 298 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 A0A1W2PQ27 194 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 A0A1W2PQ64 194 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 A0A1W2PQD8 194 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 ZBBXA8MT70 800 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 PITPNM1O00562 1244 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 TLR3O15455 904 aaKnown RBP7.77□□□□□ -1.17
LIMD1-204ENST00000474665 MAGEB2O15479 319 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 ACTN4O43707 911 aaKnown RBP7.77□□□□□ -1.17
LIMD1-204ENST00000474665 USO1O60763 962 aaKnown RBP7.77□□□□□ -1.17
LIMD1-204ENST00000474665 DKC1O60832 514 aaKnown RBP eCLIP7.77□□□□□ -1.17
LIMD1-204ENST00000474665 NBNO60934 754 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 VTNP04004 478 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 CTSHP09668 335 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 IQCF3P0C7M6 154 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 PLA2G4BP0C869 781 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 GNAT1P11488 350 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 PFKFB1P16118 471 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 ATP2A2P16615 1042 aaKnown RBP7.77□□□□□ -1.17
LIMD1-204ENST00000474665 CYP11B2P19099 503 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 THPOP40225 353 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 RFC5P40937 340 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 CCL23P55773 120 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 MCM6Q14566 821 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 OTUD6AQ7L8S5 288 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 METTL13Q8N6R0 699 aa7.77□□□□□ -1.17
LIMD1-204ENST00000474665 PDILTQ8N807 584 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms