RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 DHX38Q92620 1227 aaKnown RBP11.08□□□□□ -0.64
COL8A1-206ENST00000474648 KIFAP3Q92845 792 aa11.08□□□□□ -0.64
COL8A1-206ENST00000474648 SMARCE1Q969G3 411 aa11.08□□□□□ -0.64
COL8A1-206ENST00000474648 SYAP1Q96A49 352 aaPredicted RBP11.08□□□□□ -0.64
COL8A1-206ENST00000474648 DRC1Q96MC2 740 aa11.08□□□□□ -0.64
COL8A1-206ENST00000474648 NTPCRQ9BSD7 190 aaKnown RBP11.08□□□□□ -0.64
COL8A1-206ENST00000474648 TMEM121BQ9BXQ6 578 aaPredicted RBP11.08□□□□□ -0.64
COL8A1-206ENST00000474648 FGFBP2Q9BYJ0 223 aa11.08□□□□□ -0.64
COL8A1-206ENST00000474648 C11orf49Q9H6J7 331 aa11.08□□□□□ -0.64
COL8A1-206ENST00000474648 PARVGQ9HBI0 331 aa11.08□□□□□ -0.64
COL8A1-206ENST00000474648 TRMT13Q9NUP7 481 aaKnown RBP11.08□□□□□ -0.64
COL8A1-206ENST00000474648 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.08□□□□□ -0.64
COL8A1-206ENST00000474648 COL4A3BPQ9Y5P4 624 aa11.08□□□□□ -0.64
COL8A1-206ENST00000474648 KIAA0100Q14667 2235 aaKnown RBP11.08□□□□□ -0.64
COL8A1-206ENST00000474648 ASAP2O43150 1006 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 B4GALT4O60513 344 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 TBCAO75347 108 aaKnown RBP11.07□□□□□ -0.64
COL8A1-206ENST00000474648 FAM13AO94988 1023 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 CD4P01730 458 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 GAP43P17677 238 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 TMOD1P28289 359 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 DNM2P50570 870 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 LAMTOR4Q0VGL1 99 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 STK4Q13043 487 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 PTK7Q13308 1070 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 MORC3Q14149 939 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 ZSCAN23Q3MJ62 389 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 ISM2Q6H9L7 571 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 ANKRD33Q7Z3H0 272 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 RPAINQ86UA6 219 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 SFR1Q86XK3 245 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 FAM126BQ8IXS8 530 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 NME8Q8N427 588 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 MYCT1Q8N699 235 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 GLIS3Q8NEA6 775 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 DNAJB3Q8WWF6 145 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 SPIRE2Q8WWL2 714 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 PSPC1Q8WXF1 523 aaKnown RBP11.07□□□□□ -0.64
COL8A1-206ENST00000474648 ABHD8Q96I13 439 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 STRA6Q9BX79 667 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 ADAMTS10Q9H324 1103 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 ZHX3Q9H4I2 956 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 C17orf75Q9HAS0 396 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 CDHR5Q9HBB8 845 aa11.07□□□□□ -0.64
COL8A1-206ENST00000474648 BIN1O00499 593 aa11.06□□□□□ -0.64
COL8A1-206ENST00000474648 GPR32O75388 356 aa11.06□□□□□ -0.64
COL8A1-206ENST00000474648 LETM1O95202 739 aaPredicted RBP11.06□□□□□ -0.64
COL8A1-206ENST00000474648 VTNP04004 478 aa11.06□□□□□ -0.64
COL8A1-206ENST00000474648 MAPTP10636 758 aaKnown RBP11.06□□□□□ -0.64
COL8A1-206ENST00000474648 NMT1P30419 496 aaKnown RBP11.06□□□□□ -0.64
COL8A1-206ENST00000474648 NPTX2P47972 431 aa11.06□□□□□ -0.64
COL8A1-206ENST00000474648 PEX3P56589 373 aa11.06□□□□□ -0.64
COL8A1-206ENST00000474648 TLE2Q04725 743 aa11.06□□□□□ -0.64
COL8A1-206ENST00000474648 PSMD2Q13200 908 aa11.06□□□□□ -0.64
COL8A1-206ENST00000474648 CAPSQ13938 189 aa11.06□□□□□ -0.64
COL8A1-206ENST00000474648 MXD4Q14582 209 aaPredicted RBP11.06□□□□□ -0.64
COL8A1-206ENST00000474648 ODR4Q5SWX8 454 aa11.06□□□□□ -0.64
COL8A1-206ENST00000474648 TAF2Q6P1X5 1199 aa11.06□□□□□ -0.64
COL8A1-206ENST00000474648 ZNF720Q7Z2F6 126 aa11.06□□□□□ -0.64
COL8A1-206ENST00000474648 NECAB2Q7Z6G3 386 aa11.06□□□□□ -0.64
COL8A1-206ENST00000474648 RHPN2Q8IUC4 686 aa11.06□□□□□ -0.64
COL8A1-206ENST00000474648 KCNN1Q92952 543 aa11.06□□□□□ -0.64
COL8A1-206ENST00000474648 FUCA2Q9BTY2 467 aa11.06□□□□□ -0.64
COL8A1-206ENST00000474648 FAM49AQ9H0Q0 323 aaPredicted RBP11.06□□□□□ -0.64
COL8A1-206ENST00000474648 SLC39A2Q9NP94 309 aa11.06□□□□□ -0.64
COL8A1-206ENST00000474648 OLFML3Q9NRN5 406 aa11.06□□□□□ -0.64
COL8A1-206ENST00000474648 TBC1D7Q9P0N9 293 aa11.06□□□□□ -0.64
COL8A1-206ENST00000474648 SEL1LQ9UBV2 794 aa11.06□□□□□ -0.64
COL8A1-206ENST00000474648 ADGRA3Q8IWK6 1321 aa11.06□□□□□ -0.64
COL8A1-206ENST00000474648 WDR81Q562E7 1941 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 MYH9P35579 1960 aaKnown RBP11.05□□□□□ -0.64
COL8A1-206ENST00000474648 RBAK-RBAKDNI3L0D1 243 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 SLC16A4O15374 487 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 PPP1R37O75864 691 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 SRGAP2CP0DJJ0 459 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 NAMPTP43490 491 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 GPC3P51654 580 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 CASP5P51878 434 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 NCKAP1LP55160 1127 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 NLRP11P59045 1033 aaKnown RBP11.05□□□□□ -0.64
COL8A1-206ENST00000474648 POU5F1BQ06416 359 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 LRRC26Q2I0M4 334 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 TRIM60Q495X7 471 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 FAM26FQ5R3K3 315 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 ZNF658Q5TYW1 1059 aaPredicted RBP11.05□□□□□ -0.64
COL8A1-206ENST00000474648 TRAF7Q6Q0C0 670 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 EPM2AIP1Q7L775 607 aaPredicted RBP11.05□□□□□ -0.64
COL8A1-206ENST00000474648 TRIML1Q8N9V2 468 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 KIAA0895Q8NCT3 520 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 TMEM161BQ8NDZ6 487 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 ZNF668Q96K58 619 aaPredicted RBP11.05□□□□□ -0.64
COL8A1-206ENST00000474648 IFT74Q96LB3 600 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 TOX2Q96NM4 488 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 MAP7D2Q96T17 732 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 KIFC3Q9BVG8 833 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 GZF1Q9H116 711 aaPredicted RBP11.05□□□□□ -0.64
COL8A1-206ENST00000474648 ST6GALNAC4Q9H4F1 302 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 IFT122Q9HBG6 1241 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 EXOC1Q9NV70 894 aa11.05□□□□□ -0.64
COL8A1-206ENST00000474648 RMND1Q9NWS8 449 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms