RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 HIPK3Q9H422 1215 aa4.62□□□□□ -1.67
GAPVD1-216ENST00000474637 CALCOCO1Q9P1Z2 691 aa4.62□□□□□ -1.67
GAPVD1-216ENST00000474637 GABBR1Q9UBS5 961 aa4.62□□□□□ -1.67
GAPVD1-216ENST00000474637 MYH9P35579 1960 aaKnown RBP4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 MBLAC1A4D2B0 266 aaPredicted RBP4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 VWA3AA6NCI4 1184 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 MAGEB2O15479 319 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 TEX33O43247 280 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 LYPLA2O95372 231 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 INSRRP14616 1297 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 CD44P16070 742 aaKnown RBP4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 MARK3P27448 753 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 TXKP42681 527 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 MAGEA10P43363 369 aaPredicted RBP4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 QARSP47897 775 aaKnown RBP4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 HNRNPH2P55795 449 aaKnown RBP4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 ETF1P62495 437 aaKnown RBP4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 ADAM17P78536 824 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 PRKCEQ02156 737 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 TBX2Q13207 712 aaPredicted RBP4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 XKR3Q5GH77 459 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 ARL6IP4Q66PJ3 421 aaKnown RBP4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 HAUS3Q68CZ6 603 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 SPECC1LQ69YQ0 1117 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 OTUD6AQ7L8S5 288 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 SH3RF1Q7Z6J0 888 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 TMEM139Q8IV31 216 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 TC2NQ8N9U0 490 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 CPLX3Q8WVH0 158 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 BAG1Q99933 345 aaPredicted RBP4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 POLR3CQ9BUI4 534 aaPredicted RBP4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 NIFKQ9BYG3 293 aaKnown RBP4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 RNPEPQ9H4A4 650 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 ZSWIM4Q9H7M6 989 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 L2HGDHQ9H9P8 463 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 TUFT1Q9NNX1 390 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 SETD4Q9NVD3 440 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 DACH1Q9UI36 760 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 TELO2Q9Y4R8 837 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 PCDHA2Q9Y5H9 948 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 TANC1Q9C0D5 1861 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 KAT6AQ92794 2004 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 WDR81Q562E7 1941 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 SMIM35A0A1B0GVV1 85 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 M0QZ92 97 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 FANCGO15287 622 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 ARHGAP6O43182 974 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 ZSCAN12O43309 604 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 URI1O94763 535 aaPredicted RBP4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 TUBB4AP04350 444 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 CYP2C9P11712 490 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 ACTN1P12814 892 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 SELPP16109 830 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 SYN1P17600 705 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 TMOD1P28289 359 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 ERCC5P28715 1186 aaPredicted RBP4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 CDC25AP30304 524 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 ATP2C1P98194 919 aaPredicted RBP4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 CDC42EP1Q00587 391 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 SPIRE1Q08AE8 756 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 PSRC1Q6PGN9 363 aaPredicted RBP4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 FBXO38Q6PIJ6 1188 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 MTHFD1LQ6UB35 978 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 DTHD1Q6ZMT9 781 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 CREBRFQ8IUR6 639 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 C4orf19Q8IY42 314 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 KCTD17Q8N5Z5 321 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 C4orf32Q8N8J7 132 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 TRIML1Q8N9V2 468 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 LMBR1Q8WVP7 490 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 BADQ92934 168 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 UIMC1Q96RL1 719 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 GDF15Q99988 308 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 PPP1R12CQ9BZL4 782 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 UBE2OQ9C0C9 1292 aaKnown RBP4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 BLZF1Q9H2G9 400 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 MTIF3Q9H2K0 278 aaKnown RBP4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 IL23AQ9NPF7 189 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 PPP2R2CQ9Y2T4 447 aa4.61□□□□□ -1.67
GAPVD1-216ENST00000474637 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.61□□□□□ -1.671e-6■□□□□ 9.4
GAPVD1-216ENST00000474637 PPP1R3GB7ZBB8 358 aa4.6□□□□□ -1.67
GAPVD1-216ENST00000474637 TULP2O00295 520 aa4.6□□□□□ -1.67
GAPVD1-216ENST00000474637 EML1O00423 815 aa4.6□□□□□ -1.67
GAPVD1-216ENST00000474637 TREHO43280 583 aa4.6□□□□□ -1.67
GAPVD1-216ENST00000474637 CCP110O43303 1012 aa4.6□□□□□ -1.67
GAPVD1-216ENST00000474637 GAS2O43903 313 aaKnown RBP4.6□□□□□ -1.67
GAPVD1-216ENST00000474637 STX10O60499 249 aa4.6□□□□□ -1.67
GAPVD1-216ENST00000474637 IQCF3P0C7M6 154 aa4.6□□□□□ -1.67
GAPVD1-216ENST00000474637 PYGBP11216 843 aa4.6□□□□□ -1.67
GAPVD1-216ENST00000474637 CKBP12277 381 aa4.6□□□□□ -1.67
GAPVD1-216ENST00000474637 ATP4AP20648 1035 aa4.6□□□□□ -1.67
GAPVD1-216ENST00000474637 CYP2C18P33260 490 aa4.6□□□□□ -1.67
GAPVD1-216ENST00000474637 RFC5P40937 340 aa4.6□□□□□ -1.67
GAPVD1-216ENST00000474637 TECP42680 631 aa4.6□□□□□ -1.67
GAPVD1-216ENST00000474637 DPYDQ12882 1025 aa4.6□□□□□ -1.67
GAPVD1-216ENST00000474637 IL17AQ16552 155 aa4.6□□□□□ -1.67
GAPVD1-216ENST00000474637 TRIM71Q2Q1W2 868 aaKnown RBP4.6□□□□□ -1.67
GAPVD1-216ENST00000474637 FAM26DQ5JW98 314 aa4.6□□□□□ -1.67
GAPVD1-216ENST00000474637 ODR4Q5SWX8 454 aa4.6□□□□□ -1.67
GAPVD1-216ENST00000474637 SPATA1Q5VX52 437 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms