RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 SNX29Q8TEQ0 813 aa17.82■□□□□ 0.44
ITGB1-210ENST00000474568 NACC1Q96RE7 527 aa17.82■□□□□ 0.44
ITGB1-210ENST00000474568 IFT122Q9HBG6 1241 aa17.82■□□□□ 0.44
ITGB1-210ENST00000474568 GPRC5CQ9NQ84 441 aa17.82■□□□□ 0.44
ITGB1-210ENST00000474568 HCSTQ9UBK5 93 aa17.82■□□□□ 0.44
ITGB1-210ENST00000474568 LOXHD1Q8IVV2 1947 aa17.82■□□□□ 0.44
ITGB1-210ENST00000474568 DGAT1O75907 488 aa17.81■□□□□ 0.44
ITGB1-210ENST00000474568 RPA1P27694 616 aa17.81■□□□□ 0.44
ITGB1-210ENST00000474568 ZRSR1Q15695 479 aaKnown RBP17.81■□□□□ 0.44
ITGB1-210ENST00000474568 LONRF3Q496Y0 759 aa17.81■□□□□ 0.44
ITGB1-210ENST00000474568 DTHD1Q6ZMT9 781 aa17.81■□□□□ 0.44
ITGB1-210ENST00000474568 CMTR2Q8IYT2 770 aaKnown RBP17.81■□□□□ 0.44
ITGB1-210ENST00000474568 SAMD11Q96NU1 681 aa17.81■□□□□ 0.44
ITGB1-210ENST00000474568 INO80BQ9C086 356 aaPredicted RBP17.81■□□□□ 0.44
ITGB1-210ENST00000474568 POLR3FQ9H1D9 316 aaPredicted RBP17.81■□□□□ 0.44
ITGB1-210ENST00000474568 MINDY3Q9H8M7 445 aa17.81■□□□□ 0.44
ITGB1-210ENST00000474568 ARHGEF35A5YM69 484 aa17.8■□□□□ 0.44
ITGB1-210ENST00000474568 GAS2O43903 313 aaKnown RBP17.8■□□□□ 0.44
ITGB1-210ENST00000474568 LINC00271P0C7V0 271 aa17.8■□□□□ 0.44
ITGB1-210ENST00000474568 BMPR1AP36894 532 aa17.8■□□□□ 0.44
ITGB1-210ENST00000474568 FAM189BP81408 668 aa17.8■□□□□ 0.44
ITGB1-210ENST00000474568 ATP2C1P98194 919 aaPredicted RBP17.8■□□□□ 0.44
ITGB1-210ENST00000474568 SPOUT1Q5T280 376 aaKnown RBP17.8■□□□□ 0.44
ITGB1-210ENST00000474568 TWF2Q6IBS0 349 aaKnown RBP17.8■□□□□ 0.44
ITGB1-210ENST00000474568 ECHDC2Q86YB7 292 aa17.8■□□□□ 0.44
ITGB1-210ENST00000474568 RAB34Q9BZG1 259 aa17.8■□□□□ 0.44
ITGB1-210ENST00000474568 POLD4Q9HCU8 107 aa17.8■□□□□ 0.44
ITGB1-210ENST00000474568 TMEM161AQ9NX61 479 aa17.8■□□□□ 0.44
ITGB1-210ENST00000474568 KIAA1024Q9UPX6 916 aa17.8■□□□□ 0.44
ITGB1-210ENST00000474568 TTC3P53804 2025 aa17.8■□□□□ 0.44
ITGB1-210ENST00000474568 VWA3AA6NCI4 1184 aa17.79■□□□□ 0.44
ITGB1-210ENST00000474568 LAD1O00515 517 aa17.79■□□□□ 0.44
ITGB1-210ENST00000474568 ASAP2O43150 1006 aa17.79■□□□□ 0.44
ITGB1-210ENST00000474568 XRCC6P12956 609 aaKnown RBP eCLIP17.79■□□□□ 0.44
ITGB1-210ENST00000474568 CAPSQ13938 189 aa17.79■□□□□ 0.44
ITGB1-210ENST00000474568 PADI6Q6TGC4 694 aa17.79■□□□□ 0.44
ITGB1-210ENST00000474568 SRGAP1Q7Z6B7 1085 aa17.79■□□□□ 0.44
ITGB1-210ENST00000474568 IGSF22Q8N9C0 903 aa17.79■□□□□ 0.44
ITGB1-210ENST00000474568 DDX19AQ9NUU7 478 aaKnown RBP17.79■□□□□ 0.44
ITGB1-210ENST00000474568 RNF19AQ9NV58 838 aa17.79■□□□□ 0.44
ITGB1-210ENST00000474568 DBR1Q9UK59 544 aaKnown RBP17.79■□□□□ 0.44
ITGB1-210ENST00000474568 COL4A6Q14031 1691 aa17.79■□□□□ 0.44
ITGB1-210ENST00000474568 COL4A4P53420 1690 aaPredicted RBP17.78■□□□□ 0.44
ITGB1-210ENST00000474568 H3BNC9 293 aa17.78■□□□□ 0.44
ITGB1-210ENST00000474568 INO80B-WBP1J3KQ70 363 aa17.78■□□□□ 0.44
ITGB1-210ENST00000474568 POU3F3P20264 500 aaPredicted RBP17.78■□□□□ 0.44
ITGB1-210ENST00000474568 PDCP20941 246 aa17.78■□□□□ 0.44
ITGB1-210ENST00000474568 SYT1P21579 422 aa17.78■□□□□ 0.44
ITGB1-210ENST00000474568 GLRA2P23416 452 aa17.78■□□□□ 0.44
ITGB1-210ENST00000474568 ARL2P36404 184 aa17.78■□□□□ 0.44
ITGB1-210ENST00000474568 PRPHP41219 470 aa17.78■□□□□ 0.44
ITGB1-210ENST00000474568 PHKA2P46019 1235 aa17.78■□□□□ 0.44
ITGB1-210ENST00000474568 TFDP1Q14186 410 aa17.78■□□□□ 0.44
ITGB1-210ENST00000474568 PDIA5Q14554 519 aa17.78■□□□□ 0.44
ITGB1-210ENST00000474568 MXD4Q14582 209 aaPredicted RBP17.78■□□□□ 0.44
ITGB1-210ENST00000474568 KRT79Q5XKE5 535 aa17.78■□□□□ 0.44
ITGB1-210ENST00000474568 CLP1Q92989 425 aaKnown RBP17.78■□□□□ 0.44
ITGB1-210ENST00000474568 LPPQ93052 612 aa17.78■□□□□ 0.44
ITGB1-210ENST00000474568 PLIN2Q99541 437 aa17.78■□□□□ 0.44
ITGB1-210ENST00000474568 BHMT2Q9H2M3 363 aa17.78■□□□□ 0.44
ITGB1-210ENST00000474568 ELAC1Q9H777 363 aaKnown RBP17.78■□□□□ 0.44
ITGB1-210ENST00000474568 RNF216Q9NWF9 866 aaPredicted RBP17.78■□□□□ 0.44
ITGB1-210ENST00000474568 DACT1Q9NYF0 836 aa17.78■□□□□ 0.44
ITGB1-210ENST00000474568 A0A0U1RQF3 1178 aa17.77■□□□□ 0.44
ITGB1-210ENST00000474568 LRRIQ4A6NIV6 560 aa17.77■□□□□ 0.44
ITGB1-210ENST00000474568 E9PMD0 336 aa17.77■□□□□ 0.44
ITGB1-210ENST00000474568 GRM6O15303 877 aa17.77■□□□□ 0.44
ITGB1-210ENST00000474568 ATF7P17544 494 aaPredicted RBP17.77■□□□□ 0.44
ITGB1-210ENST00000474568 FAM173BQ6P4H8 233 aa17.77■□□□□ 0.44
ITGB1-210ENST00000474568 FAM43BQ6ZT52 329 aaPredicted RBP17.77■□□□□ 0.44
ITGB1-210ENST00000474568 BRAPQ7Z569 592 aa17.77■□□□□ 0.44
ITGB1-210ENST00000474568 HSCBQ8IWL3 235 aa17.77■□□□□ 0.44
ITGB1-210ENST00000474568 ABI1Q8IZP0 508 aa17.77■□□□□ 0.44
ITGB1-210ENST00000474568 HELQQ8TDG4 1101 aa17.77■□□□□ 0.44
ITGB1-210ENST00000474568 INTS4Q96HW7 963 aaKnown RBP17.77■□□□□ 0.44
ITGB1-210ENST00000474568 ALG13Q9NP73 1137 aaKnown RBP17.77■□□□□ 0.44
ITGB1-210ENST00000474568 CHST12Q9NRB3 414 aa17.77■□□□□ 0.44
ITGB1-210ENST00000474568 AGPAT5Q9NUQ2 364 aa17.77■□□□□ 0.44
ITGB1-210ENST00000474568 TYW1Q9NV66 732 aaKnown RBP17.77■□□□□ 0.44
ITGB1-210ENST00000474568 RWDD3Q9Y3V2 267 aa17.77■□□□□ 0.44
ITGB1-210ENST00000474568 PRRC2BQ5JSZ5 2229 aaKnown RBP17.76■□□□□ 0.43
ITGB1-210ENST00000474568 ERLIN2O94905 339 aa17.76■□□□□ 0.43
ITGB1-210ENST00000474568 RB1P06400 928 aa17.76■□□□□ 0.43
ITGB1-210ENST00000474568 PTENP60484 403 aa17.76■□□□□ 0.43
ITGB1-210ENST00000474568 PTPROQ16827 1216 aa17.76■□□□□ 0.43
ITGB1-210ENST00000474568 CLLU1OSQ5K130 101 aa17.76■□□□□ 0.43
ITGB1-210ENST00000474568 ZNF598Q86UK7 904 aaKnown RBP17.76■□□□□ 0.43
ITGB1-210ENST00000474568 MCPH1Q8NEM0 835 aa17.76■□□□□ 0.43
ITGB1-210ENST00000474568 BSNDQ8WZ55 320 aa17.76■□□□□ 0.43
ITGB1-210ENST00000474568 SNX21Q969T3 373 aa17.76■□□□□ 0.43
ITGB1-210ENST00000474568 CPB2Q96IY4 423 aa17.76■□□□□ 0.43
ITGB1-210ENST00000474568 CASD1Q96PB1 797 aa17.76■□□□□ 0.43
ITGB1-210ENST00000474568 MMTAG2Q9BU76 263 aaKnown RBP17.76■□□□□ 0.43
ITGB1-210ENST00000474568 C11orf84Q9BUA3 381 aaPredicted RBP17.76■□□□□ 0.43
ITGB1-210ENST00000474568 TMEM117Q9H0C3 514 aa17.76■□□□□ 0.43
ITGB1-210ENST00000474568 LMCD1Q9NZU5 365 aa17.76■□□□□ 0.43
ITGB1-210ENST00000474568 PRUNE2Q8WUY3 3088 aa17.76■□□□□ 0.43
ITGB1-210ENST00000474568 MEIS3P2A8K0S8 358 aa17.75■□□□□ 0.43
ITGB1-210ENST00000474568 C5orf67F2Z3F1 127 aa17.75■□□□□ 0.43
ITGB1-210ENST00000474568 HOXA2O43364 376 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms