RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 TUBP50607 506 aa20.08■□□□□ 0.81
ECHDC1-214ENST00000474289 HERC4Q5GLZ8 1057 aaPredicted RBP20.08■□□□□ 0.81
ECHDC1-214ENST00000474289 CWF19L1Q69YN2 538 aaKnown RBP20.08■□□□□ 0.81
ECHDC1-214ENST00000474289 AADACL2Q6P093 401 aa20.08■□□□□ 0.81
ECHDC1-214ENST00000474289 GJB7Q6PEY0 223 aa20.08■□□□□ 0.81
ECHDC1-214ENST00000474289 VSTM1Q6UX27 236 aa20.08■□□□□ 0.81
ECHDC1-214ENST00000474289 ALG3Q92685 438 aa20.08■□□□□ 0.81
ECHDC1-214ENST00000474289 TRIM7Q9C029 511 aa20.08■□□□□ 0.81
ECHDC1-214ENST00000474289 RNPEPL1Q9HAU8 725 aa20.08■□□□□ 0.81
ECHDC1-214ENST00000474289 ABCA3Q99758 1704 aa20.08■□□□□ 0.81
ECHDC1-214ENST00000474289 SCN7AQ01118 1682 aa20.08■□□□□ 0.81
ECHDC1-214ENST00000474289 NCANO14594 1321 aa20.08■□□□□ 0.81
ECHDC1-214ENST00000474289 NPHP3-ACAD11A0A0J9YXS1 232 aa20.08■□□□□ 0.8
ECHDC1-214ENST00000474289 SPDYE5A6NIY4 337 aa20.08■□□□□ 0.8
ECHDC1-214ENST00000474289 SMIM24O75264 130 aa20.08■□□□□ 0.8
ECHDC1-214ENST00000474289 PRDX5P30044 214 aa20.08■□□□□ 0.8
ECHDC1-214ENST00000474289 LONRF1Q17RB8 773 aa20.08■□□□□ 0.8
ECHDC1-214ENST00000474289 EDRF1Q3B7T1 1238 aa20.08■□□□□ 0.8
ECHDC1-214ENST00000474289 OLIG1Q8TAK6 271 aa20.08■□□□□ 0.8
ECHDC1-214ENST00000474289 ARHGEF2Q92974 986 aaKnown RBP20.08■□□□□ 0.8
ECHDC1-214ENST00000474289 MKNK2Q9HBH9 465 aa20.08■□□□□ 0.8
ECHDC1-214ENST00000474289 SIX2Q9NPC8 291 aa20.08■□□□□ 0.8
ECHDC1-214ENST00000474289 BMP2KQ9NSY1 1161 aaPredicted RBP20.08■□□□□ 0.8
ECHDC1-214ENST00000474289 BTG4Q9NY30 223 aa20.08■□□□□ 0.8
ECHDC1-214ENST00000474289 ARMCX3Q9UH62 379 aaPredicted RBP20.08■□□□□ 0.8
ECHDC1-214ENST00000474289 PFASO15067 1338 aa20.08■□□□□ 0.8
ECHDC1-214ENST00000474289 RARGP13631 454 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 PLCG2P16885 1265 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 ABCB4P21439 1286 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 GBP1P32455 592 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 CRKLP46109 303 aaKnown RBP20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 UBE4AQ14139 1066 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 PARP10Q53GL7 1025 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 CGB2Q6NT52 195 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 MFN1Q8IWA4 741 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 CCDC65Q8IXS2 484 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 ANKRD42Q8N9B4 389 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 GDAP1Q8TB36 358 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 RAB3IPQ96QF0 476 aaPredicted RBP20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 TMOD4Q9NZQ9 345 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 PCDHA3Q9Y5H8 950 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 FAM170AA1A519 330 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 PHF2O75151 1096 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 GH1P01241 217 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 VCAM1P19320 739 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 CALB2P22676 271 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 EPHA7Q15375 998 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 C12orf60Q5U649 245 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 CNBD1Q8NA66 436 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 FBF1Q8TES7 1133 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 CKAP2Q8WWK9 683 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 GJA10Q969M2 543 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 CRAMP1Q96RY5 1269 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 VAT1LQ9HCJ6 419 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 CCDC87Q9NVE4 849 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 ANKIB1Q9P2G1 1089 aa20.07■□□□□ 0.8
ECHDC1-214ENST00000474289 LRRD1A4D1F6 860 aa20.06■□□□□ 0.8
ECHDC1-214ENST00000474289 PEX11AO75192 247 aa20.06■□□□□ 0.8
ECHDC1-214ENST00000474289 GFPT2O94808 682 aa20.06■□□□□ 0.8
ECHDC1-214ENST00000474289 ROR2Q01974 943 aaKnown RBP20.06■□□□□ 0.8
ECHDC1-214ENST00000474289 TRAF1Q13077 416 aa20.06■□□□□ 0.8
ECHDC1-214ENST00000474289 DCAF17Q5H9S7 520 aaPredicted RBP20.06■□□□□ 0.8
ECHDC1-214ENST00000474289 PPP4R3CPQ6ZMV5 832 aa20.06■□□□□ 0.8
ECHDC1-214ENST00000474289 GLYCTKQ8IVS8 523 aa20.06■□□□□ 0.8
ECHDC1-214ENST00000474289 SLC30A5Q8TAD4 765 aa20.06■□□□□ 0.8
ECHDC1-214ENST00000474289 KLHL14Q9P2G3 628 aa20.06■□□□□ 0.8
ECHDC1-214ENST00000474289 PARP2Q9UGN5 583 aa20.06■□□□□ 0.8
ECHDC1-214ENST00000474289 SEC63Q9UGP8 760 aaKnown RBP20.06■□□□□ 0.8
ECHDC1-214ENST00000474289 PDHA1P08559 390 aa20.06■□□□□ 0.8
ECHDC1-214ENST00000474289 PCK1P35558 622 aa20.06■□□□□ 0.8
ECHDC1-214ENST00000474289 RAD23BP54727 409 aa20.06■□□□□ 0.8
ECHDC1-214ENST00000474289 MRPS35P82673 323 aaKnown RBP20.06■□□□□ 0.8
ECHDC1-214ENST00000474289 MXRA7P84157 204 aa20.06■□□□□ 0.8
ECHDC1-214ENST00000474289 TTC27Q6P3X3 843 aa20.06■□□□□ 0.8
ECHDC1-214ENST00000474289 FRMD5Q7Z6J6 570 aa20.06■□□□□ 0.8
ECHDC1-214ENST00000474289 ECHDC2Q86YB7 292 aa20.06■□□□□ 0.8
ECHDC1-214ENST00000474289 PRELID2Q8N945 189 aa20.06■□□□□ 0.8
ECHDC1-214ENST00000474289 PIGSQ96S52 555 aa20.06■□□□□ 0.8
ECHDC1-214ENST00000474289 ROPN1BQ9BZX4 212 aaPredicted RBP20.06■□□□□ 0.8
ECHDC1-214ENST00000474289 ROPN1Q9HAT0 212 aaPredicted RBP20.06■□□□□ 0.8
ECHDC1-214ENST00000474289 MINPP1Q9UNW1 487 aa20.06■□□□□ 0.8
ECHDC1-214ENST00000474289 E9PMD0 336 aa20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 XRCC5P13010 732 aaKnown RBP20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 CHRNA3P32297 505 aa20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 RNASELQ05823 741 aaKnown RBP20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 RNF43Q68DV7 783 aa20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 USP17L2Q6R6M4 530 aa20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 LMNTD2Q8IXW0 634 aa20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 SLC44A5Q8NCS7 719 aa20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 TGS1Q96RS0 853 aaKnown RBP20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 SYT15Q9BQS2 421 aa20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 TFCP2L1Q9NZI6 479 aa20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 FOXO6A8MYZ6 492 aa20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 ANKRD63C9JTQ0 380 aa20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 PODXLO00592 558 aa20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 ABLIM1O14639 778 aa20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 TMEM253P0C7T8 217 aa20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 TPBGLP0DKB5 382 aa20.05■□□□□ 0.8
ECHDC1-214ENST00000474289 GM2AP17900 193 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms