RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 PKP1Q13835 747 aa15.25■□□□□ 0.03
USF1-205ENST00000473969 PPP2R5AQ15172 486 aa15.25■□□□□ 0.03
USF1-205ENST00000473969 PPP2R2DQ66LE6 453 aa15.25■□□□□ 0.03
USF1-205ENST00000473969 LINC00301Q8NCQ3 95 aa15.25■□□□□ 0.03
USF1-205ENST00000473969 KIFAP3Q92845 792 aa15.25■□□□□ 0.03
USF1-205ENST00000473969 TSPYL2Q9H2G4 693 aaPredicted RBP15.25■□□□□ 0.03
USF1-205ENST00000473969 RGS18Q9NS28 235 aa15.25■□□□□ 0.03
USF1-205ENST00000473969 DACT1Q9NYF0 836 aa15.25■□□□□ 0.03
USF1-205ENST00000473969 FBXO2Q9UK22 296 aaPredicted RBP15.25■□□□□ 0.03
USF1-205ENST00000473969 PCDHB7Q9Y5E2 793 aa15.25■□□□□ 0.03
USF1-205ENST00000473969 MORC2Q9Y6X9 1032 aaPredicted RBP15.25■□□□□ 0.03
USF1-205ENST00000473969 LRRIQ4A6NIV6 560 aa15.24■□□□□ 0.03
USF1-205ENST00000473969 PPP6R2O75170 966 aa15.24■□□□□ 0.03
USF1-205ENST00000473969 CSDE1O75534 798 aaKnown RBP15.24■□□□□ 0.03
USF1-205ENST00000473969 ERLIN2O94905 339 aa15.24■□□□□ 0.03
USF1-205ENST00000473969 BRD1O95696 1058 aa15.24■□□□□ 0.03
USF1-205ENST00000473969 NCLP19338 710 aaKnown RBP15.24■□□□□ 0.03
USF1-205ENST00000473969 FGFR4P22455 802 aa15.24■□□□□ 0.03
USF1-205ENST00000473969 ANP32AP39687 249 aaKnown RBP15.24■□□□□ 0.03
USF1-205ENST00000473969 SARSP49591 514 aaKnown RBP15.24■□□□□ 0.03
USF1-205ENST00000473969 GRIN1Q05586 938 aa15.24■□□□□ 0.03
USF1-205ENST00000473969 POU5F1BQ06416 359 aa15.24■□□□□ 0.03
USF1-205ENST00000473969 GRB10Q13322 594 aa15.24■□□□□ 0.03
USF1-205ENST00000473969 PCBP1Q15365 356 aaKnown RBP eCLIP15.24■□□□□ 0.03
USF1-205ENST00000473969 SLC24A5Q71RS6 500 aa15.24■□□□□ 0.03
USF1-205ENST00000473969 TMCO2Q7Z6W1 182 aaPredicted RBP15.24■□□□□ 0.03
USF1-205ENST00000473969 NPAS4Q8IUM7 802 aa15.24■□□□□ 0.03
USF1-205ENST00000473969 ZBTB8OSQ8IWT0 167 aa15.24■□□□□ 0.03
USF1-205ENST00000473969 KCNG4Q8TDN1 519 aa15.24■□□□□ 0.03
USF1-205ENST00000473969 FAM161BQ96MY7 647 aa15.24■□□□□ 0.03
USF1-205ENST00000473969 PNMA5Q96PV4 448 aa15.24■□□□□ 0.03
USF1-205ENST00000473969 CCSER1Q9C0I3 900 aa15.24■□□□□ 0.03
USF1-205ENST00000473969 TMX1Q9H3N1 280 aa15.24■□□□□ 0.03
USF1-205ENST00000473969 ZNF576Q9H609 170 aa15.24■□□□□ 0.03
USF1-205ENST00000473969 CHST12Q9NRB3 414 aa15.24■□□□□ 0.03
USF1-205ENST00000473969 INO80B-WBP1J3KQ70 363 aa15.23■□□□□ 0.03
USF1-205ENST00000473969 CA3P07451 260 aa15.23■□□□□ 0.03
USF1-205ENST00000473969 PLA2G4BP0C869 781 aa15.23■□□□□ 0.03
USF1-205ENST00000473969 MYOGP15173 224 aa15.23■□□□□ 0.03
USF1-205ENST00000473969 GLRA2P23416 452 aa15.23■□□□□ 0.03
USF1-205ENST00000473969 NUCB2P80303 420 aa15.23■□□□□ 0.03
USF1-205ENST00000473969 KARSQ15046 597 aaKnown RBP15.23■□□□□ 0.03
USF1-205ENST00000473969 TMEM119Q4V9L6 283 aa15.23■□□□□ 0.03
USF1-205ENST00000473969 SPECC1Q5M775 1068 aa15.23■□□□□ 0.03
USF1-205ENST00000473969 RRAGBQ5VZM2 374 aa15.23■□□□□ 0.03
USF1-205ENST00000473969 TWF2Q6IBS0 349 aaKnown RBP15.23■□□□□ 0.03
USF1-205ENST00000473969 RTN4RL1Q86UN2 441 aaPredicted RBP15.23■□□□□ 0.03
USF1-205ENST00000473969 SYT2Q8N9I0 419 aaPredicted RBP15.23■□□□□ 0.03
USF1-205ENST00000473969 DEPTORQ8TB45 409 aa15.23■□□□□ 0.03
USF1-205ENST00000473969 ASAP3Q8TDY4 903 aa15.23■□□□□ 0.03
USF1-205ENST00000473969 SYMPKQ92797 1274 aaKnown RBP15.23■□□□□ 0.03
USF1-205ENST00000473969 EPSTI1Q96J88 318 aa15.23■□□□□ 0.03
USF1-205ENST00000473969 DRC1Q96MC2 740 aa15.23■□□□□ 0.03
USF1-205ENST00000473969 CLIC6Q96NY7 704 aa15.23■□□□□ 0.03
USF1-205ENST00000473969 TIPINQ9BVW5 301 aa15.23■□□□□ 0.03
USF1-205ENST00000473969 C2orf40Q9H1Z8 148 aa15.23■□□□□ 0.03
USF1-205ENST00000473969 SEMA6BQ9H3T3 888 aa15.23■□□□□ 0.03
USF1-205ENST00000473969 IFT122Q9HBG6 1241 aa15.23■□□□□ 0.03
USF1-205ENST00000473969 GPRC5CQ9NQ84 441 aa15.23■□□□□ 0.03
USF1-205ENST00000473969 KCND2Q9NZV8 630 aa15.23■□□□□ 0.03
USF1-205ENST00000473969 KCNG1Q9UIX4 513 aa15.23■□□□□ 0.03
USF1-205ENST00000473969 PIN4Q9Y237 131 aaKnown RBP15.23■□□□□ 0.03
USF1-205ENST00000473969 YBX2Q9Y2T7 364 aaKnown RBP15.23■□□□□ 0.03
USF1-205ENST00000473969 RANBP2P49792 3224 aaKnown RBP15.22■□□□□ 0.03
USF1-205ENST00000473969 KRT18P05783 430 aaKnown RBP15.22■□□□□ 0.03
USF1-205ENST00000473969 SKIP12755 728 aa15.22■□□□□ 0.03
USF1-205ENST00000473969 PLCG1P19174 1290 aa15.22■□□□□ 0.03
USF1-205ENST00000473969 NAMPTP43490 491 aa15.22■□□□□ 0.03
USF1-205ENST00000473969 ME1P48163 572 aa15.22■□□□□ 0.03
USF1-205ENST00000473969 PTENP60484 403 aa15.22■□□□□ 0.03
USF1-205ENST00000473969 KRT85P78386 507 aa15.22■□□□□ 0.03
USF1-205ENST00000473969 DNM1Q05193 864 aaKnown RBP15.22■□□□□ 0.03
USF1-205ENST00000473969 CAPSQ13938 189 aa15.22■□□□□ 0.03
USF1-205ENST00000473969 DHX8Q14562 1220 aaKnown RBP15.22■□□□□ 0.03
USF1-205ENST00000473969 TMEM132AQ24JP5 1023 aa15.22■□□□□ 0.03
USF1-205ENST00000473969 RINT1Q6NUQ1 792 aa15.22■□□□□ 0.03
USF1-205ENST00000473969 Q7L0L9 218 aa15.22■□□□□ 0.03
USF1-205ENST00000473969 KCNK18Q7Z418 384 aa15.22■□□□□ 0.03
USF1-205ENST00000473969 RBAK-RBAKDNI3L0D1 243 aa15.21■□□□□ 0.03
USF1-205ENST00000473969 MGEA5O60502 916 aa15.21■□□□□ 0.03
USF1-205ENST00000473969 CUTAO60888 179 aa15.21■□□□□ 0.03
USF1-205ENST00000473969 AXLP30530 894 aa15.21■□□□□ 0.03
USF1-205ENST00000473969 DSC3Q14574 896 aa15.21■□□□□ 0.03
USF1-205ENST00000473969 CCDC73Q6ZRK6 1079 aa15.21■□□□□ 0.03
USF1-205ENST00000473969 LINC01599Q8WXQ3 324 aa15.21■□□□□ 0.03
USF1-205ENST00000473969 RAD54LQ92698 747 aa15.21■□□□□ 0.03
USF1-205ENST00000473969 NFKBIZQ9BYH8 718 aa15.21■□□□□ 0.03
USF1-205ENST00000473969 STK17AQ9UEE5 414 aa15.21■□□□□ 0.03
USF1-205ENST00000473969 CCDC169A6NNP5 214 aa15.2■□□□□ 0.02
USF1-205ENST00000473969 C9IYK1 514 aa15.2■□□□□ 0.02
USF1-205ENST00000473969 HOXA2O43364 376 aa15.2■□□□□ 0.02
USF1-205ENST00000473969 HIP1RO75146 1068 aa15.2■□□□□ 0.02
USF1-205ENST00000473969 LIG1P18858 919 aa15.2■□□□□ 0.02
USF1-205ENST00000473969 GUCY2CP25092 1073 aa15.2■□□□□ 0.02
USF1-205ENST00000473969 DDIT3P35638 169 aa15.2■□□□□ 0.02
USF1-205ENST00000473969 STAT6P42226 847 aa15.2■□□□□ 0.02
USF1-205ENST00000473969 SMTNP53814 917 aa15.2■□□□□ 0.02
USF1-205ENST00000473969 SLC12A3P55017 1021 aa15.2■□□□□ 0.02
USF1-205ENST00000473969 HTRA4P83105 476 aaPredicted RBP15.2■□□□□ 0.02
USF1-205ENST00000473969 DMP1Q13316 513 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms