RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 LRP10Q7Z4F1 713 aa9.05□□□□□ -0.96
A1CF-209ENST00000473480 RIOX2Q8IUF8 465 aa9.05□□□□□ -0.96
A1CF-209ENST00000473480 TMEM151BQ8IW70 566 aa9.05□□□□□ -0.96
A1CF-209ENST00000473480 CD99L2Q8TCZ2 262 aa9.05□□□□□ -0.96
A1CF-209ENST00000473480 SREK1Q8WXA9 508 aaKnown RBP9.05□□□□□ -0.96
A1CF-209ENST00000473480 AP5M1Q9H0R1 490 aa9.05□□□□□ -0.96
A1CF-209ENST00000473480 X6R8D5 127 aa9.05□□□□□ -0.96
A1CF-209ENST00000473480 LAMA2P24043 3122 aaKnown RBP9.05□□□□□ -0.96
A1CF-209ENST00000473480 PRUNE2Q8WUY3 3088 aa9.04□□□□□ -0.96
A1CF-209ENST00000473480 BTBD11A6QL63 1104 aa9.04□□□□□ -0.96
A1CF-209ENST00000473480 NCAM1P13591 858 aa9.04□□□□□ -0.96
A1CF-209ENST00000473480 LCP1P13796 627 aa9.04□□□□□ -0.96
A1CF-209ENST00000473480 IGFBP6P24592 240 aaPredicted RBP9.04□□□□□ -0.96
A1CF-209ENST00000473480 LSAMPQ13449 338 aa9.04□□□□□ -0.96
A1CF-209ENST00000473480 USP53Q70EK8 1073 aa9.04□□□□□ -0.96
A1CF-209ENST00000473480 CHAMP1Q96JM3 812 aa9.04□□□□□ -0.96
A1CF-209ENST00000473480 GUCD1Q96NT3 240 aa9.04□□□□□ -0.96
A1CF-209ENST00000473480 VPS33BQ9H267 617 aa9.04□□□□□ -0.96
A1CF-209ENST00000473480 GPR27Q9NS67 375 aa9.04□□□□□ -0.96
A1CF-209ENST00000473480 COA3Q9Y2R0 106 aaPredicted RBP9.04□□□□□ -0.96
A1CF-209ENST00000473480 SNED1Q8TER0 1413 aa9.04□□□□□ -0.96
A1CF-209ENST00000473480 H7BY64 318 aa9.03□□□□□ -0.96
A1CF-209ENST00000473480 ASGR2P07307 311 aa9.03□□□□□ -0.96
A1CF-209ENST00000473480 SLC6A11P48066 632 aa9.03□□□□□ -0.96
A1CF-209ENST00000473480 EIF5P55010 431 aaKnown RBP9.03□□□□□ -0.96
A1CF-209ENST00000473480 SSRP1Q08945 709 aaKnown RBP9.03□□□□□ -0.96
A1CF-209ENST00000473480 ARHGEF6Q15052 776 aa9.03□□□□□ -0.96
A1CF-209ENST00000473480 CNKSR3Q6P9H4 555 aa9.03□□□□□ -0.96
A1CF-209ENST00000473480 RSPO2Q6UXX9 243 aaPredicted RBP9.03□□□□□ -0.96
A1CF-209ENST00000473480 NPM2Q86SE8 214 aaKnown RBP9.03□□□□□ -0.96
A1CF-209ENST00000473480 NLRP10Q86W26 655 aa9.03□□□□□ -0.96
A1CF-209ENST00000473480 NBPF5PQ86XG9 351 aaPredicted RBP9.03□□□□□ -0.96
A1CF-209ENST00000473480 FAM129CQ86XR2 697 aa9.03□□□□□ -0.96
A1CF-209ENST00000473480 TMEFF1Q8IYR6 380 aa9.03□□□□□ -0.96
A1CF-209ENST00000473480 SEC14L1Q92503 715 aa9.03□□□□□ -0.96
A1CF-209ENST00000473480 OSBP2Q969R2 916 aa9.03□□□□□ -0.96
A1CF-209ENST00000473480 CDCA5Q96FF9 252 aa9.03□□□□□ -0.96
A1CF-209ENST00000473480 PLA2G2DQ9UNK4 145 aa9.03□□□□□ -0.96
A1CF-209ENST00000473480 MTHFSP49914 203 aa9.02□□□□□ -0.97
A1CF-209ENST00000473480 IFRD2Q12894 506 aaPredicted RBP9.02□□□□□ -0.97
A1CF-209ENST00000473480 AMOTQ4VCS5 1084 aa9.02□□□□□ -0.97
A1CF-209ENST00000473480 TCERG1LQ5VWI1 586 aa9.02□□□□□ -0.97
A1CF-209ENST00000473480 FAM109BQ6ICB4 259 aaPredicted RBP9.02□□□□□ -0.97
A1CF-209ENST00000473480 MAFAQ8NHW3 353 aaPredicted RBP9.02□□□□□ -0.97
A1CF-209ENST00000473480 PANK1Q8TE04 598 aa9.02□□□□□ -0.97
A1CF-209ENST00000473480 DCAF4Q8WV16 495 aa9.02□□□□□ -0.97
A1CF-209ENST00000473480 DEPDC7Q96QD5 511 aa9.02□□□□□ -0.97
A1CF-209ENST00000473480 P2RX7Q99572 595 aaKnown RBP9.02□□□□□ -0.97
A1CF-209ENST00000473480 EPB41L4AQ9HCS5 686 aaPredicted RBP9.02□□□□□ -0.97
A1CF-209ENST00000473480 PFDN2Q9UHV9 154 aa9.02□□□□□ -0.97
A1CF-209ENST00000473480 FBXL7Q9UJT9 491 aa9.02□□□□□ -0.97
A1CF-209ENST00000473480 FAN1Q9Y2M0 1017 aa9.02□□□□□ -0.97
A1CF-209ENST00000473480 SIT1Q9Y3P8 196 aa9.02□□□□□ -0.97
A1CF-209ENST00000473480 ZNF609O15014 1411 aa9.02□□□□□ -0.97
A1CF-209ENST00000473480 SHTN1A0MZ66 631 aa9.01□□□□□ -0.97
A1CF-209ENST00000473480 PMLP29590 882 aa9.01□□□□□ -0.97
A1CF-209ENST00000473480 INHBEP58166 350 aa9.01□□□□□ -0.97
A1CF-209ENST00000473480 RASA3Q14644 834 aa9.01□□□□□ -0.97
A1CF-209ENST00000473480 TBC1D10BQ4KMP7 808 aaPredicted RBP9.01□□□□□ -0.97
A1CF-209ENST00000473480 PLEKHO1Q53GL0 409 aaPredicted RBP9.01□□□□□ -0.97
A1CF-209ENST00000473480 YOD1Q5VVQ6 348 aaPredicted RBP9.01□□□□□ -0.97
A1CF-209ENST00000473480 LCNL1Q6ZST4 164 aa9.01□□□□□ -0.97
A1CF-209ENST00000473480 DPH6Q7L8W6 267 aa9.01□□□□□ -0.97
A1CF-209ENST00000473480 DACT3Q96B18 629 aaPredicted RBP9.01□□□□□ -0.97
A1CF-209ENST00000473480 PHF20Q9BVI0 1012 aa9.01□□□□□ -0.97
A1CF-209ENST00000473480 BCAS3Q9H6U6 928 aa9.01□□□□□ -0.97
A1CF-209ENST00000473480 CLDND1Q9NY35 253 aa9.01□□□□□ -0.97
A1CF-209ENST00000473480 PTCH2Q9Y6C5 1203 aa9.01□□□□□ -0.97
A1CF-209ENST00000473480 UBE2Q2LH0YL09 131 aa9□□□□□ -0.97
A1CF-209ENST00000473480 ADCY3O60266 1144 aa9□□□□□ -0.97
A1CF-209ENST00000473480 RAD17O75943 681 aa9□□□□□ -0.97
A1CF-209ENST00000473480 ATF2P15336 505 aa9□□□□□ -0.97
A1CF-209ENST00000473480 AFF3P51826 1226 aaKnown RBP9□□□□□ -0.97
A1CF-209ENST00000473480 SP3Q02447 781 aa9□□□□□ -0.97
A1CF-209ENST00000473480 TCIRG1Q13488 830 aa9□□□□□ -0.97
A1CF-209ENST00000473480 EIF4A2Q14240 407 aaKnown RBP9□□□□□ -0.97
A1CF-209ENST00000473480 SPOCD1Q6ZMY3 1216 aa9□□□□□ -0.97
A1CF-209ENST00000473480 UBE2Q1Q7Z7E8 422 aa9□□□□□ -0.97
A1CF-209ENST00000473480 SCUBE1Q8IWY4 988 aa9□□□□□ -0.97
A1CF-209ENST00000473480 TDHQ8IZJ6 230 aa9□□□□□ -0.97
A1CF-209ENST00000473480 ZBTB38Q8NAP3 1195 aaPredicted RBP9□□□□□ -0.97
A1CF-209ENST00000473480 CPA5Q8WXQ8 436 aa9□□□□□ -0.97
A1CF-209ENST00000473480 DPF2Q92785 391 aa9□□□□□ -0.97
A1CF-209ENST00000473480 MKL1Q969V6 931 aa9□□□□□ -0.97
A1CF-209ENST00000473480 PWWP2AQ96N64 755 aa9□□□□□ -0.97
A1CF-209ENST00000473480 GDF15Q99988 308 aa9□□□□□ -0.97
A1CF-209ENST00000473480 ZFYVE21Q9BQ24 234 aa9□□□□□ -0.97
A1CF-209ENST00000473480 C1QTNF1Q9BXJ1 281 aa9□□□□□ -0.97
A1CF-209ENST00000473480 SNTG2Q9NY99 539 aa9□□□□□ -0.97
A1CF-209ENST00000473480 ARID1BQ8NFD5 2236 aaPredicted RBP9□□□□□ -0.97
A1CF-209ENST00000473480 PPM1GO15355 546 aaPredicted RBP8.99□□□□□ -0.97
A1CF-209ENST00000473480 SGSM2O43147 1006 aa8.99□□□□□ -0.97
A1CF-209ENST00000473480 STARD3NLO95772 234 aa8.99□□□□□ -0.97
A1CF-209ENST00000473480 LIMS1P48059 325 aa8.99□□□□□ -0.97
A1CF-209ENST00000473480 FOXO4P98177 505 aa8.99□□□□□ -0.97
A1CF-209ENST00000473480 MOB2Q70IA6 237 aa8.99□□□□□ -0.97
A1CF-209ENST00000473480 IPO9Q96P70 1041 aaKnown RBP8.99□□□□□ -0.97
A1CF-209ENST00000473480 SRPK1Q96SB4 655 aaKnown RBP8.99□□□□□ -0.97
A1CF-209ENST00000473480 CDC6Q99741 560 aa8.99□□□□□ -0.97
A1CF-209ENST00000473480 TMX4Q9H1E5 349 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms