RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 ATP2B4P23634 1241 aa15.41■□□□□ 0.06
NHLRC3-204ENST00000473371 PSMC2P35998 433 aaKnown RBP15.41■□□□□ 0.06
NHLRC3-204ENST00000473371 ELF3P78545 371 aaPredicted RBP15.41■□□□□ 0.06
NHLRC3-204ENST00000473371 IFI35P80217 286 aaPredicted RBP15.41■□□□□ 0.06
NHLRC3-204ENST00000473371 SLC29A2Q14542 456 aa15.41■□□□□ 0.06
NHLRC3-204ENST00000473371 RC3H1Q5TC82 1133 aaKnown RBP15.41■□□□□ 0.06
NHLRC3-204ENST00000473371 OLIG1Q8TAK6 271 aa15.41■□□□□ 0.06
NHLRC3-204ENST00000473371 TBC1D22AQ8WUA7 517 aa15.41■□□□□ 0.06
NHLRC3-204ENST00000473371 VIMP08670 466 aaKnown RBP15.4■□□□□ 0.06
NHLRC3-204ENST00000473371 MAPK7Q13164 816 aa15.4■□□□□ 0.06
NHLRC3-204ENST00000473371 NBPF9Q3BBW0 867 aa15.4■□□□□ 0.06
NHLRC3-204ENST00000473371 ZDHHC24Q6UX98 284 aa15.4■□□□□ 0.06
NHLRC3-204ENST00000473371 CCDC63Q8NA47 563 aa15.4■□□□□ 0.06
NHLRC3-204ENST00000473371 RPGRQ92834 1020 aaKnown RBP15.4■□□□□ 0.06
NHLRC3-204ENST00000473371 ARHGEF1Q92888 912 aaKnown RBP15.4■□□□□ 0.06
NHLRC3-204ENST00000473371 ELAC2Q9BQ52 826 aaKnown RBP15.4■□□□□ 0.06
NHLRC3-204ENST00000473371 THAP2Q9H0W7 228 aa15.4■□□□□ 0.06
NHLRC3-204ENST00000473371 IKZF4Q9H2S9 585 aa15.4■□□□□ 0.06
NHLRC3-204ENST00000473371 DONSONQ9NYP3 566 aa15.4■□□□□ 0.06
NHLRC3-204ENST00000473371 BAIAP2L1Q9UHR4 511 aa15.4■□□□□ 0.06
NHLRC3-204ENST00000473371 FMO5P49326 533 aa15.4■□□□□ 0.06
NHLRC3-204ENST00000473371 ITIH4Q14624 930 aa15.4■□□□□ 0.06
NHLRC3-204ENST00000473371 ARHGAP44Q17R89 818 aa15.4■□□□□ 0.06
NHLRC3-204ENST00000473371 C6orf118Q5T5N4 469 aa15.4■□□□□ 0.06
NHLRC3-204ENST00000473371 MOXD1Q6UVY6 613 aa15.4■□□□□ 0.06
NHLRC3-204ENST00000473371 CCDC113Q9H0I3 377 aa15.4■□□□□ 0.06
NHLRC3-204ENST00000473371 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.4■□□□□ 0.06
NHLRC3-204ENST00000473371 SUFUQ9UMX1 484 aa15.4■□□□□ 0.06
NHLRC3-204ENST00000473371 TGFB1I1O43294 461 aa15.39■□□□□ 0.06
NHLRC3-204ENST00000473371 CLUL1Q15846 466 aa15.39■□□□□ 0.06
NHLRC3-204ENST00000473371 AADACL2Q6P093 401 aa15.39■□□□□ 0.06
NHLRC3-204ENST00000473371 PIGWQ7Z7B1 504 aa15.39■□□□□ 0.06
NHLRC3-204ENST00000473371 ALG3Q92685 438 aa15.39■□□□□ 0.06
NHLRC3-204ENST00000473371 BORCS6Q96GS4 357 aa15.39■□□□□ 0.06
NHLRC3-204ENST00000473371 PRMT1Q99873 361 aaKnown RBP15.39■□□□□ 0.06
NHLRC3-204ENST00000473371 ADAM7Q9H2U9 754 aa15.39■□□□□ 0.06
NHLRC3-204ENST00000473371 TAS2R14Q9NYV8 317 aa15.39■□□□□ 0.06
NHLRC3-204ENST00000473371 MTRF1LQ9UGC7 380 aaKnown RBP15.39■□□□□ 0.06
NHLRC3-204ENST00000473371 SPATA31A5Q5VU36 1347 aa15.39■□□□□ 0.05
NHLRC3-204ENST00000473371 SPATA31A7Q8IWB4 1347 aa15.39■□□□□ 0.05
NHLRC3-204ENST00000473371 FAM13AO94988 1023 aa15.39■□□□□ 0.05
NHLRC3-204ENST00000473371 ATP6V1G2O95670 118 aa15.39■□□□□ 0.05
NHLRC3-204ENST00000473371 ADCY2Q08462 1091 aa15.39■□□□□ 0.05
NHLRC3-204ENST00000473371 AP3B2Q13367 1082 aa15.39■□□□□ 0.05
NHLRC3-204ENST00000473371 CNBD1Q8NA66 436 aa15.39■□□□□ 0.05
NHLRC3-204ENST00000473371 C18orf8Q96DM3 657 aa15.39■□□□□ 0.05
NHLRC3-204ENST00000473371 NOD2Q9HC29 1040 aa15.39■□□□□ 0.05
NHLRC3-204ENST00000473371 DDX4Q9NQI0 724 aaKnown RBP15.39■□□□□ 0.05
NHLRC3-204ENST00000473371 RABGAP1Q9Y3P9 1069 aa15.39■□□□□ 0.05
NHLRC3-204ENST00000473371 TMEM110-MUSTN1A8MSY1 372 aa15.39■□□□□ 0.05
NHLRC3-204ENST00000473371 PHF2O75151 1096 aa15.39■□□□□ 0.05
NHLRC3-204ENST00000473371 AGTP01019 485 aa15.39■□□□□ 0.05
NHLRC3-204ENST00000473371 NMT1P30419 496 aaKnown RBP15.39■□□□□ 0.05
NHLRC3-204ENST00000473371 SHMT1P34896 483 aa15.39■□□□□ 0.05
NHLRC3-204ENST00000473371 IFNAR2P48551 515 aa15.39■□□□□ 0.05
NHLRC3-204ENST00000473371 DRG2P55039 364 aaKnown RBP15.39■□□□□ 0.05
NHLRC3-204ENST00000473371 MYCT1Q8N699 235 aa15.39■□□□□ 0.05
NHLRC3-204ENST00000473371 SEMA4AQ9H3S1 761 aa15.39■□□□□ 0.05
NHLRC3-204ENST00000473371 TRPC6Q9Y210 931 aa15.39■□□□□ 0.05
NHLRC3-204ENST00000473371 ANKRD62A6NC57 917 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 TBX3O15119 743 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 GSTA1P08263 222 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 VCAM1P19320 739 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 SLCO1A2P46721 670 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 PTF1AQ7RTS3 328 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 CROCCP2Q86T23 111 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 COL23A1Q86Y22 540 aaPredicted RBP15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 TCP11Q8WWU5 503 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 NSRP1Q9H0G5 558 aaKnown RBP15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 COG5Q9UP83 839 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 ALG6Q9Y672 507 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 RPTORQ8N122 1335 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 MEIS2O14770 477 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 GAP43P17677 238 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 CHRNA3P32297 505 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 PTGIRP43119 386 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 RPL21P46778 160 aaKnown RBP15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 GTF2IP78347 998 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 FAM133BQ5BKY9 247 aaKnown RBP15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 EPS8L3Q8TE67 593 aaKnown RBP15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 TBC1D31Q96DN5 1066 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 INTS2Q9H0H0 1204 aaKnown RBP15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 GRHL1Q9NZI5 618 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 CTTNBP2NLQ9P2B4 639 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 STK24Q9Y6E0 443 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 EYA4O95677 639 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 CYP2J2P51589 502 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 Q4G0T1 1027 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 ZC2HC1CQ53FD0 456 aaPredicted RBP15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 AMIGO3Q86WK7 504 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 PALB2Q86YC2 1186 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 UBL4BQ8N7F7 174 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 SYT11Q9BT88 431 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 RGL1Q9NZL6 768 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 PARP2Q9UGN5 583 aa15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 CNOT7Q9UIV1 285 aaKnown RBP15.38■□□□□ 0.05
NHLRC3-204ENST00000473371 SYNGAP1Q96PV0 1343 aa15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 KIF1CO43896 1103 aaKnown RBP15.37■□□□□ 0.05
NHLRC3-204ENST00000473371 CLTAP09496 248 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms