RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 FRMPD4Q14CM0 1322 aa11.74□□□□□ -0.53
CDHR3-209ENST00000472116 FRYQ5TBA9 3013 aa11.74□□□□□ -0.53
CDHR3-209ENST00000472116 INPPL1O15357 1258 aa11.73□□□□□ -0.53
CDHR3-209ENST00000472116 FGAP02671 866 aa11.73□□□□□ -0.53
CDHR3-209ENST00000472116 LAMP2P13473 410 aa11.73□□□□□ -0.53
CDHR3-209ENST00000472116 CRYBB1P53674 252 aaPredicted RBP11.73□□□□□ -0.53
CDHR3-209ENST00000472116 FAM228AQ86W67 206 aa11.73□□□□□ -0.53
CDHR3-209ENST00000472116 ECHDC2Q86YB7 292 aa11.73□□□□□ -0.53
CDHR3-209ENST00000472116 C12orf50Q8NA57 414 aaPredicted RBP11.73□□□□□ -0.53
CDHR3-209ENST00000472116 KDF1Q8NAX2 398 aaPredicted RBP11.73□□□□□ -0.53
CDHR3-209ENST00000472116 FEZF2Q8TBJ5 459 aa11.73□□□□□ -0.53
CDHR3-209ENST00000472116 HELQQ8TDG4 1101 aa11.73□□□□□ -0.53
CDHR3-209ENST00000472116 TMEM40Q8WWA1 233 aa11.73□□□□□ -0.53
CDHR3-209ENST00000472116 RSPH1Q8WYR4 309 aa11.73□□□□□ -0.53
CDHR3-209ENST00000472116 DOCK6Q96HP0 2047 aa11.73□□□□□ -0.53
CDHR3-209ENST00000472116 KLHL5Q96PQ7 755 aa11.73□□□□□ -0.53
CDHR3-209ENST00000472116 LTB4R2Q9NPC1 389 aa11.73□□□□□ -0.53
CDHR3-209ENST00000472116 PKD2L1Q9P0L9 805 aa11.73□□□□□ -0.53
CDHR3-209ENST00000472116 DDX19BQ9UMR2 479 aa11.73□□□□□ -0.53
CDHR3-209ENST00000472116 MRPS17Q9Y2R5 130 aaKnown RBP11.73□□□□□ -0.53
CDHR3-209ENST00000472116 ZFP37Q9Y6Q3 630 aaPredicted RBP11.73□□□□□ -0.53
CDHR3-209ENST00000472116 NUMBLQ9Y6R0 609 aa11.73□□□□□ -0.53
CDHR3-209ENST00000472116 SDK1Q7Z5N4 2213 aa11.72□□□□□ -0.53
CDHR3-209ENST00000472116 KLRF2D3W0D1 207 aa11.72□□□□□ -0.53
CDHR3-209ENST00000472116 PPP1R11O60927 126 aaPredicted RBP11.72□□□□□ -0.53
CDHR3-209ENST00000472116 ADH1AP07327 375 aa11.72□□□□□ -0.53
CDHR3-209ENST00000472116 KLRC1P26715 233 aa11.72□□□□□ -0.53
CDHR3-209ENST00000472116 GPC5P78333 572 aa11.72□□□□□ -0.53
CDHR3-209ENST00000472116 HTR4Q13639 388 aa11.72□□□□□ -0.53
CDHR3-209ENST00000472116 CLLU1OSQ5K130 101 aa11.72□□□□□ -0.53
CDHR3-209ENST00000472116 KIF12Q96FN5 646 aa11.72□□□□□ -0.53
CDHR3-209ENST00000472116 IGSF21Q96ID5 467 aa11.72□□□□□ -0.53
CDHR3-209ENST00000472116 PPP1R16BQ96T49 567 aa11.72□□□□□ -0.53
CDHR3-209ENST00000472116 OSMRQ99650 979 aa11.72□□□□□ -0.53
CDHR3-209ENST00000472116 DDX23Q9BUQ8 820 aaKnown RBP11.72□□□□□ -0.53
CDHR3-209ENST00000472116 RHOBTB2Q9BYZ6 727 aa11.72□□□□□ -0.53
CDHR3-209ENST00000472116 PRMT8Q9NR22 394 aaPredicted RBP11.72□□□□□ -0.53
CDHR3-209ENST00000472116 MRPL17Q9NRX2 175 aaKnown RBP11.72□□□□□ -0.53
CDHR3-209ENST00000472116 RNF19AQ9NV58 838 aa11.72□□□□□ -0.53
CDHR3-209ENST00000472116 TTC41PQ6P2S7 1318 aa11.71□□□□□ -0.53
CDHR3-209ENST00000472116 ANHXE9PGG2 379 aa11.71□□□□□ -0.53
CDHR3-209ENST00000472116 GDF9O60383 454 aa11.71□□□□□ -0.53
CDHR3-209ENST00000472116 GLUD1P00367 558 aa11.71□□□□□ -0.53
CDHR3-209ENST00000472116 SSBP05455 408 aaKnown RBP eCLIP11.71□□□□□ -0.53
CDHR3-209ENST00000472116 CNPP09543 421 aaKnown RBP11.71□□□□□ -0.53
CDHR3-209ENST00000472116 KCNA2P16389 499 aa11.71□□□□□ -0.53
CDHR3-209ENST00000472116 RPS9P46781 194 aaKnown RBP11.71□□□□□ -0.53
CDHR3-209ENST00000472116 STAT5BP51692 787 aa11.71□□□□□ -0.53
CDHR3-209ENST00000472116 LIMK1P53667 647 aa11.71□□□□□ -0.53
CDHR3-209ENST00000472116 RNASELQ05823 741 aaKnown RBP11.71□□□□□ -0.53
CDHR3-209ENST00000472116 RING1Q06587 406 aa11.71□□□□□ -0.53
CDHR3-209ENST00000472116 MTMR1Q13613 665 aa11.71□□□□□ -0.53
CDHR3-209ENST00000472116 SIM2Q14190 667 aaPredicted RBP11.71□□□□□ -0.53
CDHR3-209ENST00000472116 KIZQ2M2Z5 673 aa11.71□□□□□ -0.53
CDHR3-209ENST00000472116 SLC44A4Q53GD3 710 aa11.71□□□□□ -0.53
CDHR3-209ENST00000472116 ZSCAN10Q96SZ4 725 aaPredicted RBP11.71□□□□□ -0.53
CDHR3-209ENST00000472116 CDHR5Q9HBB8 845 aa11.71□□□□□ -0.53
CDHR3-209ENST00000472116 JPH1Q9HDC5 661 aaPredicted RBP11.71□□□□□ -0.53
CDHR3-209ENST00000472116 SSX2IPQ9Y2D8 614 aa11.71□□□□□ -0.53
CDHR3-209ENST00000472116 GCN1Q92616 2671 aaKnown RBP11.71□□□□□ -0.54
CDHR3-209ENST00000472116 ZMYM6O95789 1325 aa11.7□□□□□ -0.54
CDHR3-209ENST00000472116 ATP9AO75110 1047 aa11.7□□□□□ -0.54
CDHR3-209ENST00000472116 URODP06132 367 aa11.7□□□□□ -0.54
CDHR3-209ENST00000472116 RBM25P49756 843 aaKnown RBP11.7□□□□□ -0.54
CDHR3-209ENST00000472116 SLC26A2P50443 739 aa11.7□□□□□ -0.54
CDHR3-209ENST00000472116 DSC3Q14574 896 aa11.7□□□□□ -0.54
CDHR3-209ENST00000472116 MTSS1LQ765P7 747 aa11.7□□□□□ -0.54
CDHR3-209ENST00000472116 PLPPR4Q7Z2D5 763 aa11.7□□□□□ -0.54
CDHR3-209ENST00000472116 MTMR8Q96EF0 704 aa11.7□□□□□ -0.54
CDHR3-209ENST00000472116 UBAC1Q9BSL1 405 aa11.7□□□□□ -0.54
CDHR3-209ENST00000472116 HELLSQ9NRZ9 838 aa11.7□□□□□ -0.54
CDHR3-209ENST00000472116 DACT1Q9NYF0 836 aa11.7□□□□□ -0.54
CDHR3-209ENST00000472116 SLC9A2Q9UBY0 812 aa11.7□□□□□ -0.54
CDHR3-209ENST00000472116 MTF2Q9Y483 593 aaPredicted RBP11.7□□□□□ -0.54
CDHR3-209ENST00000472116 COL1A2P08123 1366 aa11.69□□□□□ -0.54
CDHR3-209ENST00000472116 NEDD4P46934 1319 aa11.69□□□□□ -0.54
CDHR3-209ENST00000472116 SRRM3A6NNA2 597 aaPredicted RBP11.69□□□□□ -0.54
CDHR3-209ENST00000472116 HBP1O60381 514 aa11.69□□□□□ -0.54
CDHR3-209ENST00000472116 CD72P21854 359 aa11.69□□□□□ -0.54
CDHR3-209ENST00000472116 WTAPQ15007 396 aa11.69□□□□□ -0.54
CDHR3-209ENST00000472116 IFIT1BQ5T764 474 aaKnown RBP11.69□□□□□ -0.54
CDHR3-209ENST00000472116 TPRG1Q6ZUI0 275 aa11.69□□□□□ -0.54
CDHR3-209ENST00000472116 TMEM173Q86WV6 379 aaPredicted RBP11.69□□□□□ -0.54
CDHR3-209ENST00000472116 TBC1D10CQ8IV04 446 aa11.69□□□□□ -0.54
CDHR3-209ENST00000472116 KIAA0319LQ8IZA0 1049 aa11.69□□□□□ -0.54
CDHR3-209ENST00000472116 STAG2Q8N3U4 1231 aa11.69□□□□□ -0.54
CDHR3-209ENST00000472116 CLDN23Q96B33 292 aa11.69□□□□□ -0.54
CDHR3-209ENST00000472116 PIGSQ96S52 555 aa11.69□□□□□ -0.54
CDHR3-209ENST00000472116 SDF4Q9BRK5 362 aa11.69□□□□□ -0.54
CDHR3-209ENST00000472116 IER2Q9BTL4 223 aa11.69□□□□□ -0.54
CDHR3-209ENST00000472116 FAM217BQ9NTX9 383 aaPredicted RBP11.69□□□□□ -0.54
CDHR3-209ENST00000472116 ZBTB40Q9NUA8 1239 aa11.69□□□□□ -0.54
CDHR3-209ENST00000472116 COL4A3Q01955 1670 aa11.68□□□□□ -0.54
CDHR3-209ENST00000472116 PNMA6FA0A0J9YX94 578 aa11.68□□□□□ -0.54
CDHR3-209ENST00000472116 A0A0U1RQF3 1178 aa11.68□□□□□ -0.54
CDHR3-209ENST00000472116 C2CD2LO14523 706 aa11.68□□□□□ -0.54
CDHR3-209ENST00000472116 MAFGO15525 162 aa11.68□□□□□ -0.54
CDHR3-209ENST00000472116 RFPL2O75678 378 aa11.68□□□□□ -0.54
CDHR3-209ENST00000472116 KCNK5O95279 499 aa11.68□□□□□ -0.54
CDHR3-209ENST00000472116 TARSP26639 723 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms